RNA–Protein interactions for RNA: ENST00000526954.5

CAPN1-205, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 754 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-205ENST00000526954 LY6G5BQ8NDX9 201 aa13.67□□□□□ -0.22
CAPN1-205ENST00000526954 RAB3CQ96E17 227 aa13.67□□□□□ -0.22
CAPN1-205ENST00000526954 S100A16Q96FQ6 103 aaKnown RBP13.67□□□□□ -0.22
CAPN1-205ENST00000526954 C18orf12Q96KH6 178 aa13.67□□□□□ -0.22
CAPN1-205ENST00000526954 SULT4A1Q9BR01 284 aa13.67□□□□□ -0.22
CAPN1-205ENST00000526954 TMUB1Q9BVT8 246 aa13.67□□□□□ -0.22
CAPN1-205ENST00000526954 PLEKHJ1Q9NW61 149 aa13.67□□□□□ -0.22
CAPN1-205ENST00000526954 RPUSD1Q9UJJ7 312 aaKnown RBP13.67□□□□□ -0.22
CAPN1-205ENST00000526954 C22orf46C9J442 243 aa13.66□□□□□ -0.22
CAPN1-205ENST00000526954 HSPB6O14558 160 aa13.66□□□□□ -0.22
CAPN1-205ENST00000526954 SMAD7O15105 426 aaKnown RBP13.66□□□□□ -0.22
CAPN1-205ENST00000526954 HPGDSO60760 199 aa13.66□□□□□ -0.22
CAPN1-205ENST00000526954 CA11O75493 328 aa13.66□□□□□ -0.22
CAPN1-205ENST00000526954 EIF4EP06730 217 aaKnown RBP13.66□□□□□ -0.22
CAPN1-205ENST00000526954 FOSL1P15407 271 aa13.66□□□□□ -0.22
CAPN1-205ENST00000526954 P2RX3P56373 397 aa13.66□□□□□ -0.22
CAPN1-205ENST00000526954 MEF2CQ06413 473 aaPredicted RBP13.66□□□□□ -0.22
CAPN1-205ENST00000526954 AESQ08117 197 aa13.66□□□□□ -0.22
CAPN1-205ENST00000526954 ARL6IP1Q15041 203 aa13.66□□□□□ -0.22
CAPN1-205ENST00000526954 NKAPLQ5M9Q1 402 aa13.66□□□□□ -0.22
CAPN1-205ENST00000526954 RSBN1Q5VWQ0 802 aaPredicted RBP13.66□□□□□ -0.22
CAPN1-205ENST00000526954 CYB5R2Q6BCY4 276 aa13.66□□□□□ -0.22
CAPN1-205ENST00000526954 SLC35E4Q6ICL7 350 aa13.66□□□□□ -0.22
CAPN1-205ENST00000526954 C6orf201Q7Z4U5 140 aa13.66□□□□□ -0.22
CAPN1-205ENST00000526954 GAPTQ8N292 157 aa13.66□□□□□ -0.22
CAPN1-205ENST00000526954 MCFD2Q8NI22 146 aa13.66□□□□□ -0.22
CAPN1-205ENST00000526954 PLPPR1Q8TBJ4 325 aa13.66□□□□□ -0.22
CAPN1-205ENST00000526954 H1FXQ92522 213 aaKnown RBP13.66□□□□□ -0.22
CAPN1-205ENST00000526954 PHF21AQ96BD5 680 aa13.66□□□□□ -0.22
CAPN1-205ENST00000526954 MSI2Q96DH6 328 aaKnown RBP13.66□□□□□ -0.22
CAPN1-205ENST00000526954 COQ2Q96H96 371 aa13.66□□□□□ -0.22
CAPN1-205ENST00000526954 ARHGAP5-AS1Q96IT6 56 aa13.66□□□□□ -0.22
CAPN1-205ENST00000526954 PECRQ9BY49 303 aa13.66□□□□□ -0.22
CAPN1-205ENST00000526954 MMP27Q9H306 513 aa13.66□□□□□ -0.22
CAPN1-205ENST00000526954 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.66□□□□□ -0.22
CAPN1-205ENST00000526954 DIABLOQ9NR28 239 aa13.66□□□□□ -0.22
CAPN1-205ENST00000526954 LPAR3Q9UBY5 353 aa13.66□□□□□ -0.22
CAPN1-205ENST00000526954 KCNK7Q9Y2U2 307 aa13.66□□□□□ -0.22
CAPN1-205ENST00000526954 ZNF469Q96JG9 3925 aaPredicted RBP13.66□□□□□ -0.22
CAPN1-205ENST00000526954 TRAV20A0A0B4J274 112 aa13.65□□□□□ -0.22
CAPN1-205ENST00000526954 MFNGO00587 321 aa13.65□□□□□ -0.22
CAPN1-205ENST00000526954 CTDSP2O14595 271 aa13.65□□□□□ -0.22
CAPN1-205ENST00000526954 HIST1H1DP16402 221 aaKnown RBP13.65□□□□□ -0.22
CAPN1-205ENST00000526954 ELK1P19419 428 aa13.65□□□□□ -0.22
CAPN1-205ENST00000526954 EDDM3BP56851 147 aa13.65□□□□□ -0.22
CAPN1-205ENST00000526954 RPL31P62899 125 aaKnown RBP13.65□□□□□ -0.22
CAPN1-205ENST00000526954 EDDM3AQ14507 147 aa13.65□□□□□ -0.22
CAPN1-205ENST00000526954 ATXN7L3Q14CW9 347 aaPredicted RBP13.65□□□□□ -0.22
CAPN1-205ENST00000526954 KRBOX4Q5JUW0 171 aa13.65□□□□□ -0.22
CAPN1-205ENST00000526954 ZNF497Q6ZNH5 498 aa13.65□□□□□ -0.22
CAPN1-205ENST00000526954 NEK7Q8TDX7 302 aa13.65□□□□□ -0.22
CAPN1-205ENST00000526954 FAAP24Q9BTP7 215 aa13.65□□□□□ -0.22
CAPN1-205ENST00000526954 MIXL1Q9H2W2 232 aa13.65□□□□□ -0.22
CAPN1-205ENST00000526954 C19orf12Q9NSK7 152 aa13.65□□□□□ -0.22
CAPN1-205ENST00000526954 ETAA1Q9NY74 926 aa13.65□□□□□ -0.22
CAPN1-205ENST00000526954 ABCA1O95477 2261 aa13.65□□□□□ -0.22
CAPN1-205ENST00000526954 IGHV2-70DA0A0C4DH43 119 aa13.64□□□□□ -0.23
CAPN1-205ENST00000526954 KIR2DS1A0A191URI9 304 aa13.64□□□□□ -0.23
CAPN1-205ENST00000526954 UBE2QL1A1L167 161 aa13.64□□□□□ -0.23
CAPN1-205ENST00000526954 SERPINE3A8MV23 424 aa13.64□□□□□ -0.23
CAPN1-205ENST00000526954 XRCC3O43542 346 aa13.64□□□□□ -0.23
CAPN1-205ENST00000526954 ENSAO43768 121 aaKnown RBP13.64□□□□□ -0.23
CAPN1-205ENST00000526954 LIPFP07098 398 aa13.64□□□□□ -0.23
CAPN1-205ENST00000526954 INHBBP09529 407 aa13.64□□□□□ -0.23
CAPN1-205ENST00000526954 CD99P14209 185 aa13.64□□□□□ -0.23
CAPN1-205ENST00000526954 CDK2P24941 298 aa13.64□□□□□ -0.23
CAPN1-205ENST00000526954 GLIPR1P48060 266 aa13.64□□□□□ -0.23
CAPN1-205ENST00000526954 DVL1P1P54792 670 aaPredicted RBP13.64□□□□□ -0.23
CAPN1-205ENST00000526954 ZNF260Q3ZCT1 412 aa13.64□□□□□ -0.23
CAPN1-205ENST00000526954 RTN4RL2Q86UN3 420 aa13.64□□□□□ -0.23
CAPN1-205ENST00000526954 OR4M1Q8NGD0 313 aa13.64□□□□□ -0.23
CAPN1-205ENST00000526954 CORO2AQ92828 525 aa13.64□□□□□ -0.23
CAPN1-205ENST00000526954 TMEM186Q96B77 213 aa13.64□□□□□ -0.23
CAPN1-205ENST00000526954 CYYR1Q96J86 154 aa13.64□□□□□ -0.23
CAPN1-205ENST00000526954 C6orf62Q9GZU0 229 aaPredicted RBP13.64□□□□□ -0.23
CAPN1-205ENST00000526954 LPAR2Q9HBW0 351 aa13.64□□□□□ -0.23
CAPN1-205ENST00000526954 CELSR1Q9NYQ6 3014 aa13.64□□□□□ -0.23
CAPN1-205ENST00000526954 KIAA2026Q5HYC2 2103 aa13.64□□□□□ -0.23
CAPN1-205ENST00000526954 hADV38S2A0JD32 116 aa13.63□□□□□ -0.23
CAPN1-205ENST00000526954 TMEM30CPA0ZSE6 113 aa13.63□□□□□ -0.23
CAPN1-205ENST00000526954 ODAMA1E959 279 aa13.63□□□□□ -0.23
CAPN1-205ENST00000526954 POM121CA8CG34 1229 aa13.63□□□□□ -0.23
CAPN1-205ENST00000526954 RGS5O15539 181 aa13.63□□□□□ -0.23
CAPN1-205ENST00000526954 MT-ND4P03905 459 aa13.63□□□□□ -0.23
CAPN1-205ENST00000526954 GSTP1P09211 210 aaKnown RBP13.63□□□□□ -0.23
CAPN1-205ENST00000526954 PPIAL4GP0DN37 164 aa13.63□□□□□ -0.23
CAPN1-205ENST00000526954 GNB3P16520 340 aa13.63□□□□□ -0.23
CAPN1-205ENST00000526954 GATA3P23771 443 aa13.63□□□□□ -0.23
CAPN1-205ENST00000526954 KRTAP1-1Q07627 177 aa13.63□□□□□ -0.23
CAPN1-205ENST00000526954 CNPY1Q3B7I2 92 aa13.63□□□□□ -0.23
CAPN1-205ENST00000526954 CDNFQ49AH0 187 aa13.63□□□□□ -0.23
CAPN1-205ENST00000526954 TMEM200BQ69YZ2 307 aa13.63□□□□□ -0.23
CAPN1-205ENST00000526954 LAX1Q8IWV1 398 aa13.63□□□□□ -0.23
CAPN1-205ENST00000526954 TPRX1Q8N7U7 411 aa13.63□□□□□ -0.23
CAPN1-205ENST00000526954 DYRK2Q92630 601 aa13.63□□□□□ -0.23
CAPN1-205ENST00000526954 RIMS4Q9H426 269 aaPredicted RBP13.63□□□□□ -0.23
CAPN1-205ENST00000526954 MMP26Q9NRE1 261 aa13.63□□□□□ -0.23
CAPN1-205ENST00000526954 AK3Q9UIJ7 227 aa13.63□□□□□ -0.23
CAPN1-205ENST00000526954 KIF25Q9UIL4 384 aa13.63□□□□□ -0.23
CAPN1-205ENST00000526954 ADAM30Q9UKF2 790 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms