RNA–Protein interactions for RNA: ENST00000526025.1

CD44-222, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2 BASIC

Gene CD44, Length 1,052 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-222ENST00000526025 CA11O75493 328 aa17.09■□□□□ 0.33
CD44-222ENST00000526025 RBP4P02753 201 aa17.09■□□□□ 0.33
CD44-222ENST00000526025 SLC2A2P11168 524 aaPredicted RBP17.09■□□□□ 0.33
CD44-222ENST00000526025 MMP9P14780 707 aa17.09■□□□□ 0.33
CD44-222ENST00000526025 RPS19P39019 145 aaKnown RBP17.09■□□□□ 0.33
CD44-222ENST00000526025 VBP1P61758 197 aa17.09■□□□□ 0.33
CD44-222ENST00000526025 EDDM3AQ14507 147 aa17.09■□□□□ 0.33
CD44-222ENST00000526025 METTL11BQ5VVY1 283 aa17.09■□□□□ 0.33
CD44-222ENST00000526025 TMEM200BQ69YZ2 307 aa17.09■□□□□ 0.33
CD44-222ENST00000526025 SIGIRRQ6IA17 410 aa17.09■□□□□ 0.33
CD44-222ENST00000526025 FAM185AQ8N0U4 392 aa17.09■□□□□ 0.33
CD44-222ENST00000526025 CORO2AQ92828 525 aa17.09■□□□□ 0.33
CD44-222ENST00000526025 COQ2Q96H96 371 aa17.09■□□□□ 0.33
CD44-222ENST00000526025 WDFY2Q96P53 400 aa17.09■□□□□ 0.33
CD44-222ENST00000526025 NAA50Q9GZZ1 169 aaKnown RBP17.09■□□□□ 0.33
CD44-222ENST00000526025 UNKLQ9H9P5 680 aaKnown RBP17.09■□□□□ 0.33
CD44-222ENST00000526025 ZNF581Q9P0T4 197 aa17.09■□□□□ 0.33
CD44-222ENST00000526025 DAPK2Q9UIK4 370 aa17.09■□□□□ 0.33
CD44-222ENST00000526025 ETV7Q9Y603 341 aa17.09■□□□□ 0.33
CD44-222ENST00000526025 MCRIP1C9JLW8 97 aa17.08■□□□□ 0.32
CD44-222ENST00000526025 INAFM1C9JVW0 142 aa17.08■□□□□ 0.32
CD44-222ENST00000526025 AVPP01185 164 aa17.08■□□□□ 0.32
CD44-222ENST00000526025 FSHBP01225 129 aa17.08■□□□□ 0.32
CD44-222ENST00000526025 CHATP28329 748 aa17.08■□□□□ 0.32
CD44-222ENST00000526025 TGFBR1P36897 503 aa17.08■□□□□ 0.32
CD44-222ENST00000526025 SERPINB10P48595 397 aa17.08■□□□□ 0.32
CD44-222ENST00000526025 BLMHQ13867 455 aa17.08■□□□□ 0.32
CD44-222ENST00000526025 ATXN7L3Q14CW9 347 aaPredicted RBP17.08■□□□□ 0.32
CD44-222ENST00000526025 KRBOX4Q5JUW0 171 aa17.08■□□□□ 0.32
CD44-222ENST00000526025 ATAD3CQ5T2N8 411 aa17.08■□□□□ 0.32
CD44-222ENST00000526025 RSBN1Q5VWQ0 802 aaPredicted RBP17.08■□□□□ 0.32
CD44-222ENST00000526025 SLC35E4Q6ICL7 350 aa17.08■□□□□ 0.32
CD44-222ENST00000526025 RAB12Q6IQ22 244 aa17.08■□□□□ 0.32
CD44-222ENST00000526025 C1orf229Q6ZS94 237 aaPredicted RBP17.08■□□□□ 0.32
CD44-222ENST00000526025 USP43Q70EL4 1123 aa17.08■□□□□ 0.32
CD44-222ENST00000526025 OR4M1Q8NGD0 313 aa17.08■□□□□ 0.32
CD44-222ENST00000526025 OR56B1Q8NGI3 324 aa17.08■□□□□ 0.32
CD44-222ENST00000526025 SLC25A46Q96AG3 418 aa17.08■□□□□ 0.32
CD44-222ENST00000526025 NEDD4LQ96PU5 975 aa17.08■□□□□ 0.32
CD44-222ENST00000526025 ABRACLQ9P1F3 81 aa17.08■□□□□ 0.32
CD44-222ENST00000526025 UBE2J1Q9Y385 318 aaPredicted RBP17.08■□□□□ 0.32
CD44-222ENST00000526025 ODAMA1E959 279 aa17.07■□□□□ 0.32
CD44-222ENST00000526025 FOXI3A8MTJ6 420 aaPredicted RBP17.07■□□□□ 0.32
CD44-222ENST00000526025 AESQ08117 197 aa17.07■□□□□ 0.32
CD44-222ENST00000526025 TCF23Q7RTU1 214 aa17.07■□□□□ 0.32
CD44-222ENST00000526025 CLVS1Q8IUQ0 354 aaPredicted RBP17.07■□□□□ 0.32
CD44-222ENST00000526025 GAPTQ8N292 157 aa17.07■□□□□ 0.32
CD44-222ENST00000526025 NANPQ8TBE9 248 aa17.07■□□□□ 0.32
CD44-222ENST00000526025 KCTD12Q96CX2 325 aaKnown RBP17.07■□□□□ 0.32
CD44-222ENST00000526025 OR6C3Q9NZP0 311 aa17.07■□□□□ 0.32
CD44-222ENST00000526025 ONECUT1Q9UBC0 465 aa17.07■□□□□ 0.32
CD44-222ENST00000526025 HSF4Q9ULV5 492 aa17.07■□□□□ 0.32
CD44-222ENST00000526025 PEX16Q9Y5Y5 336 aa17.07■□□□□ 0.32
CD44-222ENST00000526025 SVEP1Q4LDE5 3571 aa17.06■□□□□ 0.32
CD44-222ENST00000526025 A0A0A6YYD4 124 aa17.06■□□□□ 0.32
CD44-222ENST00000526025 hCG_1809904A0A1W2PP81 198 aa17.06■□□□□ 0.32
CD44-222ENST00000526025 A0A1W2PPE2 198 aa17.06■□□□□ 0.32
CD44-222ENST00000526025 A0A1W2PR64 198 aa17.06■□□□□ 0.32
CD44-222ENST00000526025 A0A1W2PRV1 198 aa17.06■□□□□ 0.32
CD44-222ENST00000526025 HSPB6O14558 160 aa17.06■□□□□ 0.32
CD44-222ENST00000526025 CRLF1O75462 422 aa17.06■□□□□ 0.32
CD44-222ENST00000526025 TOX4O94842 621 aa17.06■□□□□ 0.32
CD44-222ENST00000526025 DLX6P56179 175 aa17.06■□□□□ 0.32
CD44-222ENST00000526025 ARF6P62330 175 aa17.06■□□□□ 0.32
CD44-222ENST00000526025 DYNC1I2Q13409 638 aaKnown RBP17.06■□□□□ 0.32
CD44-222ENST00000526025 ZNF273Q14593 569 aa17.06■□□□□ 0.32
CD44-222ENST00000526025 CHRFAM7AQ494W8 412 aa17.06■□□□□ 0.32
CD44-222ENST00000526025 METAP1DQ6UB28 335 aaPredicted RBP17.06■□□□□ 0.32
CD44-222ENST00000526025 BPIFB2Q8N4F0 458 aa17.06■□□□□ 0.32
CD44-222ENST00000526025 NICN1Q9BSH3 213 aa17.06■□□□□ 0.32
CD44-222ENST00000526025 BEX2Q9BXY8 128 aa17.06■□□□□ 0.32
CD44-222ENST00000526025 METTL8Q9H825 291 aaKnown RBP17.06■□□□□ 0.32
CD44-222ENST00000526025 TAS2R3Q9NYW6 316 aa17.06■□□□□ 0.32
CD44-222ENST00000526025 TRGV10A0A0A0MS01 117 aa17.05■□□□□ 0.32
CD44-222ENST00000526025 A0A0B4J203 849 aa17.05■□□□□ 0.32
CD44-222ENST00000526025 TMEM30CPA0ZSE6 113 aa17.05■□□□□ 0.32
CD44-222ENST00000526025 METTL21EPA6NDL7 271 aa17.05■□□□□ 0.32
CD44-222ENST00000526025 C17orf98A8MV24 154 aa17.05■□□□□ 0.32
CD44-222ENST00000526025 SCGNO76038 276 aa17.05■□□□□ 0.32
CD44-222ENST00000526025 ZNF728P0DKX0 622 aa17.05■□□□□ 0.32
CD44-222ENST00000526025 BLVRBP30043 206 aaPredicted RBP17.05■□□□□ 0.32
CD44-222ENST00000526025 GLIPR1P48060 266 aa17.05■□□□□ 0.32
CD44-222ENST00000526025 IDNKQ5T6J7 187 aa17.05■□□□□ 0.32
CD44-222ENST00000526025 ZNF497Q6ZNH5 498 aa17.05■□□□□ 0.32
CD44-222ENST00000526025 Q8N7P7 452 aa17.05■□□□□ 0.32
CD44-222ENST00000526025 PLPPR1Q8TBJ4 325 aa17.05■□□□□ 0.32
CD44-222ENST00000526025 LGALS14Q8TCE9 139 aa17.05■□□□□ 0.32
CD44-222ENST00000526025 ZNF714Q96N38 554 aa17.05■□□□□ 0.32
CD44-222ENST00000526025 TBX15Q96SF7 602 aa17.05■□□□□ 0.32
CD44-222ENST00000526025 DCSTAMPQ9H295 470 aa17.05■□□□□ 0.32
CD44-222ENST00000526025 NOL3O60936 208 aaKnown RBP17.04■□□□□ 0.32
CD44-222ENST00000526025 PRTN3P24158 256 aa17.04■□□□□ 0.32
CD44-222ENST00000526025 BPIFB3P59826 476 aa17.04■□□□□ 0.32
CD44-222ENST00000526025 SCGB2A2Q13296 93 aa17.04■□□□□ 0.32
CD44-222ENST00000526025 NCR3LG1Q68D85 454 aa17.04■□□□□ 0.32
CD44-222ENST00000526025 C11orf42Q8N5U0 333 aa17.04■□□□□ 0.32
CD44-222ENST00000526025 TPRX1Q8N7U7 411 aa17.04■□□□□ 0.32
CD44-222ENST00000526025 NEK7Q8TDX7 302 aa17.04■□□□□ 0.32
CD44-222ENST00000526025 GAL3ST2Q9H3Q3 398 aa17.04■□□□□ 0.32
CD44-222ENST00000526025 ETAA1Q9NY74 926 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms