RNA–Protein interactions for RNA: ENST00000524258.2

CLN8-207, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 2

Gene CLN8, Length 835 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-207ENST00000524258 NR2C2APQ86WQ0 139 aa9.73□□□□□ -0.85
CLN8-207ENST00000524258 LDLRAD3Q86YD5 345 aa9.73□□□□□ -0.85
CLN8-207ENST00000524258 GAPTQ8N292 157 aa9.73□□□□□ -0.85
CLN8-207ENST00000524258 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.73□□□□□ -0.85
CLN8-207ENST00000524258 SUMF2Q8NBJ7 301 aa9.73□□□□□ -0.85
CLN8-207ENST00000524258 PPP1R35Q8TAP8 253 aa9.73□□□□□ -0.85
CLN8-207ENST00000524258 TMEM158Q8WZ71 300 aa9.73□□□□□ -0.85
CLN8-207ENST00000524258 FCGR1BQ92637 280 aa9.73□□□□□ -0.85
CLN8-207ENST00000524258 FOXRED1Q96CU9 486 aaPredicted RBP9.73□□□□□ -0.85
CLN8-207ENST00000524258 ZNF714Q96N38 554 aa9.73□□□□□ -0.85
CLN8-207ENST00000524258 C19orf24Q9BVV8 132 aa9.73□□□□□ -0.85
CLN8-207ENST00000524258 BANF2Q9H503 90 aa9.73□□□□□ -0.85
CLN8-207ENST00000524258 GHRLQ9UBU3 117 aa9.73□□□□□ -0.85
CLN8-207ENST00000524258 UBE2J1Q9Y385 318 aaPredicted RBP9.73□□□□□ -0.85
CLN8-207ENST00000524258 TRAV1-2A0A0B4J238 106 aa9.72□□□□□ -0.85
CLN8-207ENST00000524258 A0A1W2PRD5 423 aa9.72□□□□□ -0.85
CLN8-207ENST00000524258 A0A1W2PRF3 423 aa9.72□□□□□ -0.85
CLN8-207ENST00000524258 A0A1W2PRM7 423 aa9.72□□□□□ -0.85
CLN8-207ENST00000524258 FAM90A10PA6NDY2 464 aa9.72□□□□□ -0.85
CLN8-207ENST00000524258 FAM90A18PA6NE21 464 aa9.72□□□□□ -0.85
CLN8-207ENST00000524258 FAM90A16PA6NEW6 464 aa9.72□□□□□ -0.85
CLN8-207ENST00000524258 FAM90A20PA6NIJ5 464 aa9.72□□□□□ -0.85
CLN8-207ENST00000524258 FAM90A7PA6NKC0 464 aa9.72□□□□□ -0.85
CLN8-207ENST00000524258 FAM90A22PA8MWA6 464 aa9.72□□□□□ -0.85
CLN8-207ENST00000524258 FAM90A12PA8MX19 464 aa9.72□□□□□ -0.85
CLN8-207ENST00000524258 FAM90A5PA8MXJ8 464 aa9.72□□□□□ -0.85
CLN8-207ENST00000524258 FAM90A23PA8MXZ1 464 aa9.72□□□□□ -0.85
CLN8-207ENST00000524258 CCRL2O00421 344 aa9.72□□□□□ -0.85
CLN8-207ENST00000524258 SLC17A2O00624 439 aa9.72□□□□□ -0.85
CLN8-207ENST00000524258 LDLRAD4O15165 306 aa9.72□□□□□ -0.85
CLN8-207ENST00000524258 ARL6IP5O75915 188 aa9.72□□□□□ -0.85
CLN8-207ENST00000524258 CSTBP04080 98 aaKnown RBP9.72□□□□□ -0.85
CLN8-207ENST00000524258 MELTFP08582 738 aa9.72□□□□□ -0.85
CLN8-207ENST00000524258 FAM90A15PP0C7V4 464 aa9.72□□□□□ -0.85
CLN8-207ENST00000524258 FAM90A13PP0C7W8 464 aa9.72□□□□□ -0.85
CLN8-207ENST00000524258 FAM90A14PP0C7W9 464 aa9.72□□□□□ -0.85
CLN8-207ENST00000524258 FAM90A24PP0C7X0 464 aa9.72□□□□□ -0.85
CLN8-207ENST00000524258 MGMTP16455 207 aa9.72□□□□□ -0.85
CLN8-207ENST00000524258 CALRP27797 417 aaKnown RBP9.72□□□□□ -0.85
CLN8-207ENST00000524258 CFPP27918 469 aa9.72□□□□□ -0.85
CLN8-207ENST00000524258 SAA4P35542 130 aa9.72□□□□□ -0.85
CLN8-207ENST00000524258 GUCA2AQ02747 115 aa9.72□□□□□ -0.85
CLN8-207ENST00000524258 BLMHQ13867 455 aa9.72□□□□□ -0.85
CLN8-207ENST00000524258 GPR176Q14439 515 aa9.72□□□□□ -0.85
CLN8-207ENST00000524258 ATXN7L3Q14CW9 347 aaPredicted RBP9.72□□□□□ -0.85
CLN8-207ENST00000524258 MPV17LQ2QL34 196 aa9.72□□□□□ -0.85
CLN8-207ENST00000524258 PAN3Q58A45 887 aaKnown RBP9.72□□□□□ -0.85
CLN8-207ENST00000524258 GLT8D1Q68CQ7 371 aa9.72□□□□□ -0.85
CLN8-207ENST00000524258 AWAT2Q6E213 333 aa9.72□□□□□ -0.85
CLN8-207ENST00000524258 OR10K2Q6IF99 312 aa9.72□□□□□ -0.85
CLN8-207ENST00000524258 BRICD5Q6PL45 260 aa9.72□□□□□ -0.85
CLN8-207ENST00000524258 ZNF782Q6ZMW2 699 aaPredicted RBP9.72□□□□□ -0.85
CLN8-207ENST00000524258 OR11H6Q8NGC7 330 aa9.72□□□□□ -0.85
CLN8-207ENST00000524258 OR13A1Q8NGR1 328 aa9.72□□□□□ -0.85
CLN8-207ENST00000524258 FAM216AQ8WUB2 273 aa9.72□□□□□ -0.85
CLN8-207ENST00000524258 DUX5Q96PT3 197 aa9.72□□□□□ -0.85
CLN8-207ENST00000524258 DPCDQ9BVM2 203 aaPredicted RBP9.72□□□□□ -0.85
CLN8-207ENST00000524258 KCNK15Q9H427 330 aa9.72□□□□□ -0.85
CLN8-207ENST00000524258 HEXA-AS1Q9H8Q6 139 aa9.72□□□□□ -0.85
CLN8-207ENST00000524258 TAS2R3Q9NYW6 316 aa9.72□□□□□ -0.85
CLN8-207ENST00000524258 KIF25Q9UIL4 384 aa9.72□□□□□ -0.85
CLN8-207ENST00000524258 AK6Q9Y3D8 172 aaKnown RBP9.72□□□□□ -0.85
CLN8-207ENST00000524258 A0A0A6YYD4 124 aa9.71□□□□□ -0.86
CLN8-207ENST00000524258 A0A1W2PPH5 198 aa9.71□□□□□ -0.86
CLN8-207ENST00000524258 FOXI3A8MTJ6 420 aaPredicted RBP9.71□□□□□ -0.86
CLN8-207ENST00000524258 NPIPB11E5RHQ5 1161 aa9.71□□□□□ -0.86
CLN8-207ENST00000524258 HSPB6O14558 160 aa9.71□□□□□ -0.86
CLN8-207ENST00000524258 HOXA3O43365 443 aaPredicted RBP9.71□□□□□ -0.86
CLN8-207ENST00000524258 OR7C1O76099 320 aaPredicted RBP9.71□□□□□ -0.86
CLN8-207ENST00000524258 RNASE1P07998 156 aaKnown RBP9.71□□□□□ -0.86
CLN8-207ENST00000524258 UBBP0CG47 229 aa9.71□□□□□ -0.86
CLN8-207ENST00000524258 PSMB9P28065 219 aa9.71□□□□□ -0.86
CLN8-207ENST00000524258 HTR2CP28335 458 aa9.71□□□□□ -0.86
CLN8-207ENST00000524258 FGF9P31371 208 aaPredicted RBP9.71□□□□□ -0.86
CLN8-207ENST00000524258 IER3P46695 156 aa9.71□□□□□ -0.86
CLN8-207ENST00000524258 KCNJ3P48549 501 aa9.71□□□□□ -0.86
CLN8-207ENST00000524258 BAMBIQ13145 260 aa9.71□□□□□ -0.86
CLN8-207ENST00000524258 MIDNQ504T8 468 aa9.71□□□□□ -0.86
CLN8-207ENST00000524258 KRBOX4Q5JUW0 171 aa9.71□□□□□ -0.86
CLN8-207ENST00000524258 ZNF626Q68DY1 528 aa9.71□□□□□ -0.86
CLN8-207ENST00000524258 SLC35E4Q6ICL7 350 aa9.71□□□□□ -0.86
CLN8-207ENST00000524258 HEPN1Q6WQI6 88 aa9.71□□□□□ -0.86
CLN8-207ENST00000524258 DYNAPQ8N1N2 210 aa9.71□□□□□ -0.86
CLN8-207ENST00000524258 OR6M1Q8NGM8 313 aa9.71□□□□□ -0.86
CLN8-207ENST00000524258 JMJD8Q96S16 334 aa9.71□□□□□ -0.86
CLN8-207ENST00000524258 S100A13Q99584 98 aa9.71□□□□□ -0.86
CLN8-207ENST00000524258 TM2D1Q9BX74 207 aa9.71□□□□□ -0.86
CLN8-207ENST00000524258 SELENOIQ9C0D9 397 aa9.71□□□□□ -0.86
CLN8-207ENST00000524258 MEGF9Q9H1U4 602 aa9.71□□□□□ -0.86
CLN8-207ENST00000524258 ZNF696Q9H7X3 374 aa9.71□□□□□ -0.86
CLN8-207ENST00000524258 PCDHB16Q9NRJ7 776 aa9.71□□□□□ -0.86
CLN8-207ENST00000524258 ZNRD1Q9P1U0 126 aa9.71□□□□□ -0.86
CLN8-207ENST00000524258 FBLN5Q9UBX5 448 aa9.71□□□□□ -0.86
CLN8-207ENST00000524258 SESN1Q9Y6P5 492 aa9.71□□□□□ -0.86
CLN8-207ENST00000524258 A0A087X0M5 115 aa9.7□□□□□ -0.86
CLN8-207ENST00000524258 TRAV39A0A0B4J263 110 aa9.7□□□□□ -0.86
CLN8-207ENST00000524258 A0A1B0GX30 115 aa9.7□□□□□ -0.86
CLN8-207ENST00000524258 FUOMA2VDF0 154 aa9.7□□□□□ -0.86
CLN8-207ENST00000524258 MT-ND4P03905 459 aa9.7□□□□□ -0.86
CLN8-207ENST00000524258 PAX6P26367 422 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms