RNA–Protein interactions for RNA: ENST00000524023.1

HDAC9-228, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,199 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-228ENST00000524023 SRYQ05066 204 aa9.5□□□□□ -0.89
HDAC9-228ENST00000524023 HABP2Q14520 560 aaPredicted RBP9.5□□□□□ -0.89
HDAC9-228ENST00000524023 HERPUD1Q15011 391 aa9.5□□□□□ -0.89
HDAC9-228ENST00000524023 ZDHHC23Q8IYP9 409 aa9.5□□□□□ -0.89
HDAC9-228ENST00000524023 GAPTQ8N292 157 aa9.5□□□□□ -0.89
HDAC9-228ENST00000524023 ZNF565Q8N9K5 539 aa9.5□□□□□ -0.89
HDAC9-228ENST00000524023 SUMF1Q8NBK3 374 aa9.5□□□□□ -0.89
HDAC9-228ENST00000524023 HIST1H2BAQ96A08 127 aa9.5□□□□□ -0.89
HDAC9-228ENST00000524023 SPIN2AQ99865 258 aa9.5□□□□□ -0.89
HDAC9-228ENST00000524023 SPIN2BQ9BPZ2 258 aa9.5□□□□□ -0.89
HDAC9-228ENST00000524023 PRRG4Q9BZD6 226 aa9.5□□□□□ -0.89
HDAC9-228ENST00000524023 PRDM6Q9NQX0 595 aa9.5□□□□□ -0.89
HDAC9-228ENST00000524023 MTCH1Q9NZJ7 389 aa9.5□□□□□ -0.89
HDAC9-228ENST00000524023 IL36RNQ9UBH0 155 aa9.5□□□□□ -0.89
HDAC9-228ENST00000524023 IGKV1D-13A0A0B4J2D9 117 aa9.5□□□□□ -0.89
HDAC9-228ENST00000524023 MED19A0JLT2 244 aaPredicted RBP9.5□□□□□ -0.89
HDAC9-228ENST00000524023 C7orf77A4D0Y5 90 aa9.5□□□□□ -0.89
HDAC9-228ENST00000524023 SLC22A20A6NK97 555 aa9.5□□□□□ -0.89
HDAC9-228ENST00000524023 PRSS44E7EML9 344 aa9.5□□□□□ -0.89
HDAC9-228ENST00000524023 LAMTOR5O43504 91 aa9.5□□□□□ -0.89
HDAC9-228ENST00000524023 SNRNP70P08621 437 aaKnown RBP9.5□□□□□ -0.89
HDAC9-228ENST00000524023 CELA3AP09093 270 aa9.5□□□□□ -0.89
HDAC9-228ENST00000524023 IGKV1-13P0DP09 117 aa9.5□□□□□ -0.89
HDAC9-228ENST00000524023 ACP1P24666 158 aa9.5□□□□□ -0.89
HDAC9-228ENST00000524023 FOXG1P55316 489 aaPredicted RBP9.5□□□□□ -0.89
HDAC9-228ENST00000524023 RAB5BP61020 215 aa9.5□□□□□ -0.89
HDAC9-228ENST00000524023 TUSC5Q8IXB3 177 aa9.5□□□□□ -0.89
HDAC9-228ENST00000524023 LILRB1Q8NHL6 650 aaPredicted RBP9.5□□□□□ -0.89
HDAC9-228ENST00000524023 THOC3Q96J01 351 aaKnown RBP9.5□□□□□ -0.89
HDAC9-228ENST00000524023 IP6K3Q96PC2 410 aa9.5□□□□□ -0.89
HDAC9-228ENST00000524023 C12orf57Q99622 126 aa9.5□□□□□ -0.89
HDAC9-228ENST00000524023 ZNF703Q9H7S9 590 aaPredicted RBP9.5□□□□□ -0.89
HDAC9-228ENST00000524023 COL6A3P12111 3177 aa9.5□□□□□ -0.89
HDAC9-228ENST00000524023 MUC3AQ02505 3323 aa9.49□□□□□ -0.89
HDAC9-228ENST00000524023 ZNF503-AS2A6NEH8 195 aa9.49□□□□□ -0.89
HDAC9-228ENST00000524023 ZNF732B4DXR9 585 aa9.49□□□□□ -0.89
HDAC9-228ENST00000524023 ADAM20O43506 726 aa9.49□□□□□ -0.89
HDAC9-228ENST00000524023 PITX3O75364 302 aa9.49□□□□□ -0.89
HDAC9-228ENST00000524023 TUSC2O75896 110 aa9.49□□□□□ -0.89
HDAC9-228ENST00000524023 NEURL1O76050 574 aa9.49□□□□□ -0.89
HDAC9-228ENST00000524023 IFNA4P05014 189 aa9.49□□□□□ -0.89
HDAC9-228ENST00000524023 COX5BP10606 129 aa9.49□□□□□ -0.89
HDAC9-228ENST00000524023 ZNF44P15621 663 aa9.49□□□□□ -0.89
HDAC9-228ENST00000524023 PTAFRP25105 342 aa9.49□□□□□ -0.89
HDAC9-228ENST00000524023 PPP1CCP36873 323 aaKnown RBP9.49□□□□□ -0.89
HDAC9-228ENST00000524023 CLDN18P56856 261 aa9.49□□□□□ -0.89
HDAC9-228ENST00000524023 ZNF266Q14584 549 aa9.49□□□□□ -0.89
HDAC9-228ENST00000524023 CLINT1Q14677 625 aa9.49□□□□□ -0.89
HDAC9-228ENST00000524023 MPV17LQ2QL34 196 aa9.49□□□□□ -0.89
HDAC9-228ENST00000524023 MRPL21Q7Z2W9 205 aaKnown RBP9.49□□□□□ -0.89
HDAC9-228ENST00000524023 OR2M7Q8NG81 312 aa9.49□□□□□ -0.89
HDAC9-228ENST00000524023 FAM213BQ8TBF2 198 aa9.49□□□□□ -0.89
HDAC9-228ENST00000524023 SFT2D1Q8WV19 159 aa9.49□□□□□ -0.89
HDAC9-228ENST00000524023 APOBEC3DQ96AK3 386 aaPredicted RBP9.49□□□□□ -0.89
HDAC9-228ENST00000524023 ABHD14BQ96IU4 210 aa9.49□□□□□ -0.89
HDAC9-228ENST00000524023 SIGLEC12Q96PQ1 595 aa9.49□□□□□ -0.89
HDAC9-228ENST00000524023 GPHA2Q96T91 129 aa9.49□□□□□ -0.89
HDAC9-228ENST00000524023 FAM173AQ9BQD7 235 aa9.49□□□□□ -0.89
HDAC9-228ENST00000524023 PBDC1Q9BVG4 233 aa9.49□□□□□ -0.89
HDAC9-228ENST00000524023 SLC35B3Q9H1N7 401 aa9.49□□□□□ -0.89
HDAC9-228ENST00000524023 PLEKHF2Q9H8W4 249 aa9.49□□□□□ -0.89
HDAC9-228ENST00000524023 CALHM2Q9HA72 323 aa9.49□□□□□ -0.89
HDAC9-228ENST00000524023 LYRM2Q9NU23 88 aaPredicted RBP9.49□□□□□ -0.89
HDAC9-228ENST00000524023 FBXO7Q9Y3I1 522 aa9.49□□□□□ -0.89
HDAC9-228ENST00000524023 ZNF407Q9C0G0 2248 aa9.49□□□□□ -0.89
HDAC9-228ENST00000524023 IGKV1-6A0A0C4DH72 117 aa9.48□□□□□ -0.89
HDAC9-228ENST00000524023 A0A1B0GW64 132 aa9.48□□□□□ -0.89
HDAC9-228ENST00000524023 DUXBA0A1W2PPF3 345 aa9.48□□□□□ -0.89
HDAC9-228ENST00000524023 CLEC18AA5D8T8 446 aa9.48□□□□□ -0.89
HDAC9-228ENST00000524023 ZNF724A8MTY0 619 aa9.48□□□□□ -0.89
HDAC9-228ENST00000524023 UMAD1C9J7I0 102 aa9.48□□□□□ -0.89
HDAC9-228ENST00000524023 TRAPPC2LH3BP13 241 aa9.48□□□□□ -0.89
HDAC9-228ENST00000524023 M0R036 132 aa9.48□□□□□ -0.89
HDAC9-228ENST00000524023 SSSCA1O60232 199 aa9.48□□□□□ -0.89
HDAC9-228ENST00000524023 SS18L1O75177 396 aaPredicted RBP9.48□□□□□ -0.89
HDAC9-228ENST00000524023 UCP1P25874 307 aa9.48□□□□□ -0.89
HDAC9-228ENST00000524023 ATP6V0CP27449 155 aa9.48□□□□□ -0.89
HDAC9-228ENST00000524023 TSC22D1Q15714 1073 aa9.48□□□□□ -0.89
HDAC9-228ENST00000524023 RNF212Q495C1 297 aa9.48□□□□□ -0.89
HDAC9-228ENST00000524023 CXorf66Q5JRM2 361 aaPredicted RBP9.48□□□□□ -0.89
HDAC9-228ENST00000524023 MKXQ8IYA7 352 aa9.48□□□□□ -0.89
HDAC9-228ENST00000524023 CLEC18CQ8NCF0 446 aa9.48□□□□□ -0.89
HDAC9-228ENST00000524023 LFNGQ8NES3 379 aa9.48□□□□□ -0.89
HDAC9-228ENST00000524023 MAGT1Q9H0U3 335 aa9.48□□□□□ -0.89
HDAC9-228ENST00000524023 SMOC1Q9H4F8 434 aa9.48□□□□□ -0.89
HDAC9-228ENST00000524023 TUBA4BQ9H853 241 aa9.48□□□□□ -0.89
HDAC9-228ENST00000524023 RFNGQ9Y644 331 aa9.48□□□□□ -0.89
HDAC9-228ENST00000524023 ATP23Q9Y6H3 246 aa9.48□□□□□ -0.89
HDAC9-228ENST00000524023 KMT2EQ8IZD2 1858 aa9.48□□□□□ -0.89
HDAC9-228ENST00000524023 KIR2DS1A0A191URI9 304 aa9.48□□□□□ -0.89
HDAC9-228ENST00000524023 A0A1B0GV50 99 aa9.48□□□□□ -0.89
HDAC9-228ENST00000524023 C1orf196B1AJZ1 125 aa9.48□□□□□ -0.89
HDAC9-228ENST00000524023 PROB1E7EW31 1015 aa9.48□□□□□ -0.89
HDAC9-228ENST00000524023 HSPB6O14558 160 aa9.48□□□□□ -0.89
HDAC9-228ENST00000524023 HSD17B6O14756 317 aa9.48□□□□□ -0.89
HDAC9-228ENST00000524023 NGFP01138 241 aa9.48□□□□□ -0.89
HDAC9-228ENST00000524023 MT-ND4LP03901 98 aa9.48□□□□□ -0.89
HDAC9-228ENST00000524023 OMGP23515 440 aa9.48□□□□□ -0.89
HDAC9-228ENST00000524023 KIR2DS4P43632 304 aa9.48□□□□□ -0.89
HDAC9-228ENST00000524023 KIR2DS1Q14954 304 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms