RNA–Protein interactions for RNA: ENST00000523125.5

VEGFA-223, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-223ENST00000523125 KBTBD11-OT1A0A1B0GTJ5 212 aa9.92□□□□□ -0.82
VEGFA-223ENST00000523125 IRGMA1A4Y4 181 aa9.92□□□□□ -0.82
VEGFA-223ENST00000523125 ZNF729A6NN14 1252 aaPredicted RBP9.92□□□□□ -0.82
VEGFA-223ENST00000523125 LY6LH3BQJ8 138 aa9.92□□□□□ -0.82
VEGFA-223ENST00000523125 F2RL2O00254 374 aa9.92□□□□□ -0.82
VEGFA-223ENST00000523125 HSPB6O14558 160 aa9.92□□□□□ -0.82
VEGFA-223ENST00000523125 CDRT1O95170 752 aa9.92□□□□□ -0.82
VEGFA-223ENST00000523125 CD2P06729 351 aa9.92□□□□□ -0.82
VEGFA-223ENST00000523125 GNAO1P09471 354 aa9.92□□□□□ -0.82
VEGFA-223ENST00000523125 CD24P25063 80 aa9.92□□□□□ -0.82
VEGFA-223ENST00000523125 OR3A4PP47883 348 aa9.92□□□□□ -0.82
VEGFA-223ENST00000523125 RPS11P62280 158 aaKnown RBP eCLIP9.92□□□□□ -0.82
VEGFA-223ENST00000523125 PAX5Q02548 391 aa9.92□□□□□ -0.82
VEGFA-223ENST00000523125 IL13RA2Q14627 380 aa9.92□□□□□ -0.82
VEGFA-223ENST00000523125 RCN1Q15293 331 aa9.92□□□□□ -0.82
VEGFA-223ENST00000523125 PIGYQ3MUY2 71 aa9.92□□□□□ -0.82
VEGFA-223ENST00000523125 DMKNQ6E0U4 476 aaPredicted RBP9.92□□□□□ -0.82
VEGFA-223ENST00000523125 DHRSXQ8N5I4 330 aa9.92□□□□□ -0.82
VEGFA-223ENST00000523125 OR13A1Q8NGR1 328 aa9.92□□□□□ -0.82
VEGFA-223ENST00000523125 OR52N1Q8NH53 320 aa9.92□□□□□ -0.82
VEGFA-223ENST00000523125 PLPPR1Q8TBJ4 325 aa9.92□□□□□ -0.82
VEGFA-223ENST00000523125 ZNF596Q8TC21 504 aa9.92□□□□□ -0.82
VEGFA-223ENST00000523125 GGHQ92820 318 aa9.92□□□□□ -0.82
VEGFA-223ENST00000523125 GHSRQ92847 366 aa9.92□□□□□ -0.82
VEGFA-223ENST00000523125 SMIM19Q96E16 107 aa9.92□□□□□ -0.82
VEGFA-223ENST00000523125 CPNE2Q96FN4 548 aaPredicted RBP9.92□□□□□ -0.82
VEGFA-223ENST00000523125 TMEM80Q96HE8 168 aa9.92□□□□□ -0.82
VEGFA-223ENST00000523125 KIRREL1Q96J84 757 aa9.92□□□□□ -0.82
VEGFA-223ENST00000523125 GPER1Q99527 375 aa9.92□□□□□ -0.82
VEGFA-223ENST00000523125 PRSS22Q9GZN4 317 aa9.92□□□□□ -0.82
VEGFA-223ENST00000523125 WNT10AQ9GZT5 417 aa9.92□□□□□ -0.82
VEGFA-223ENST00000523125 NCOR1P1Q9H4R4 102 aa9.92□□□□□ -0.82
VEGFA-223ENST00000523125 LINC00574Q9H8X3 128 aa9.92□□□□□ -0.82
VEGFA-223ENST00000523125 TMEM138Q9NPI0 162 aa9.92□□□□□ -0.82
VEGFA-223ENST00000523125 C8orf4Q9NR00 106 aa9.92□□□□□ -0.82
VEGFA-223ENST00000523125 OR6C3Q9NZP0 311 aa9.92□□□□□ -0.82
VEGFA-223ENST00000523125 KIF25Q9UIL4 384 aa9.92□□□□□ -0.82
VEGFA-223ENST00000523125 ZNF281Q9Y2X9 895 aa9.92□□□□□ -0.82
VEGFA-223ENST00000523125 EXOSC1Q9Y3B2 195 aaKnown RBP9.92□□□□□ -0.82
VEGFA-223ENST00000523125 BUB1B-PAK6H3BSN5 160 aa9.91□□□□□ -0.82
VEGFA-223ENST00000523125 MAGEB3O15480 346 aa9.91□□□□□ -0.82
VEGFA-223ENST00000523125 GPX5O75715 221 aa9.91□□□□□ -0.82
VEGFA-223ENST00000523125 HTR3BO95264 441 aa9.91□□□□□ -0.82
VEGFA-223ENST00000523125 CD28P10747 220 aa9.91□□□□□ -0.82
VEGFA-223ENST00000523125 IGFBP3P17936 291 aaPredicted RBP9.91□□□□□ -0.82
VEGFA-223ENST00000523125 MYL12AP19105 171 aa9.91□□□□□ -0.82
VEGFA-223ENST00000523125 ST3GAL4Q11206 333 aa9.91□□□□□ -0.82
VEGFA-223ENST00000523125 DOC2BQ14184 412 aa9.91□□□□□ -0.82
VEGFA-223ENST00000523125 RSU1Q15404 277 aa9.91□□□□□ -0.82
VEGFA-223ENST00000523125 HLA-DRB5Q30154 266 aa9.91□□□□□ -0.82
VEGFA-223ENST00000523125 PAN3Q58A45 887 aaKnown RBP9.91□□□□□ -0.82
VEGFA-223ENST00000523125 RSBN1Q5VWQ0 802 aaPredicted RBP9.91□□□□□ -0.82
VEGFA-223ENST00000523125 SETD9Q8NE22 299 aa9.91□□□□□ -0.82
VEGFA-223ENST00000523125 OR4D6Q8NGJ1 314 aa9.91□□□□□ -0.82
VEGFA-223ENST00000523125 PGLYRP3Q96LB9 341 aa9.91□□□□□ -0.82
VEGFA-223ENST00000523125 FAM192AQ9GZU8 254 aa9.91□□□□□ -0.82
VEGFA-223ENST00000523125 IFT22Q9H7X7 185 aa9.91□□□□□ -0.82
VEGFA-223ENST00000523125 IL36GQ9NZH8 169 aa9.91□□□□□ -0.82
VEGFA-223ENST00000523125 TRAV8-7A0A075B6U6 113 aa9.9□□□□□ -0.82
VEGFA-223ENST00000523125 MEIKINA0A087WXM9 373 aa9.9□□□□□ -0.82
VEGFA-223ENST00000523125 MAGEA13PA6NCF6 341 aa9.9□□□□□ -0.82
VEGFA-223ENST00000523125 ADARB2-AS1A8MUL3 147 aa9.9□□□□□ -0.82
VEGFA-223ENST00000523125 LEUTXA8MZ59 168 aa9.9□□□□□ -0.82
VEGFA-223ENST00000523125 NPIPB11E5RHQ5 1161 aa9.9□□□□□ -0.82
VEGFA-223ENST00000523125 BDKRB2P30411 391 aa9.9□□□□□ -0.82
VEGFA-223ENST00000523125 ZNF93P35789 620 aaPredicted RBP9.9□□□□□ -0.82
VEGFA-223ENST00000523125 RBM11P57052 281 aaKnown RBP9.9□□□□□ -0.82
VEGFA-223ENST00000523125 TMEM95Q3KNT9 176 aa9.9□□□□□ -0.82
VEGFA-223ENST00000523125 NHLRC3Q5JS37 347 aa9.9□□□□□ -0.82
VEGFA-223ENST00000523125 DDI2Q5TDH0 399 aa9.9□□□□□ -0.82
VEGFA-223ENST00000523125 LYG1Q8N1E2 194 aa9.9□□□□□ -0.82
VEGFA-223ENST00000523125 ZFP41Q8N8Y5 198 aa9.9□□□□□ -0.82
VEGFA-223ENST00000523125 ZNF565Q8N9K5 539 aa9.9□□□□□ -0.82
VEGFA-223ENST00000523125 FBLIM1Q8WUP2 373 aa9.9□□□□□ -0.82
VEGFA-223ENST00000523125 OR5M11Q96RB7 305 aa9.9□□□□□ -0.82
VEGFA-223ENST00000523125 OCSTAMPQ9BR26 566 aa9.9□□□□□ -0.82
VEGFA-223ENST00000523125 BARHL1Q9BZE3 327 aa9.9□□□□□ -0.82
VEGFA-223ENST00000523125 CALYQ9NYX4 217 aa9.9□□□□□ -0.82
VEGFA-223ENST00000523125 ING4Q9UNL4 249 aa9.9□□□□□ -0.82
VEGFA-223ENST00000523125 ST3GAL6Q9Y274 331 aa9.9□□□□□ -0.82
VEGFA-223ENST00000523125 HSPE1-MOB4S4R3N1 261 aa9.9□□□□□ -0.82
VEGFA-223ENST00000523125 TRBV5-7A0A0A0MS05 114 aa9.89□□□□□ -0.83
VEGFA-223ENST00000523125 TRAV39A0A0B4J263 110 aa9.89□□□□□ -0.83
VEGFA-223ENST00000523125 TOR1AO14656 332 aa9.89□□□□□ -0.83
VEGFA-223ENST00000523125 CASQ2O14958 399 aaPredicted RBP9.89□□□□□ -0.83
VEGFA-223ENST00000523125 XPNPEP2O43895 674 aa9.89□□□□□ -0.83
VEGFA-223ENST00000523125 FBXO24O75426 580 aa9.89□□□□□ -0.83
VEGFA-223ENST00000523125 OPN1MWP04001 364 aa9.89□□□□□ -0.83
VEGFA-223ENST00000523125 AMY1AP04745 511 aa9.89□□□□□ -0.83
VEGFA-223ENST00000523125 AMY2AP04746 511 aa9.89□□□□□ -0.83
VEGFA-223ENST00000523125 OPN1MW2P0DN77 364 aa9.89□□□□□ -0.83
VEGFA-223ENST00000523125 OPN1MW3P0DN78 364 aa9.89□□□□□ -0.83
VEGFA-223ENST00000523125 NFYBP25208 207 aa9.89□□□□□ -0.83
VEGFA-223ENST00000523125 CAPGP40121 348 aa9.89□□□□□ -0.83
VEGFA-223ENST00000523125 GLP1RP43220 463 aa9.89□□□□□ -0.83
VEGFA-223ENST00000523125 PRRX1P54821 245 aa9.89□□□□□ -0.83
VEGFA-223ENST00000523125 PPP3R1P63098 170 aa9.89□□□□□ -0.83
VEGFA-223ENST00000523125 Q499Y3 187 aa9.89□□□□□ -0.83
VEGFA-223ENST00000523125 YIF1BQ5BJH7 314 aa9.89□□□□□ -0.83
VEGFA-223ENST00000523125 TPTE2P1Q5T6R2 138 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms