RNA–Protein interactions for RNA: ENST00000522504.5

TRAPPC9-213, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 665 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-213ENST00000522504 NANOS3P60323 173 aaKnown RBP12.02□□□□□ -0.49
TRAPPC9-213ENST00000522504 CDK5R1Q15078 307 aa12.02□□□□□ -0.49
TRAPPC9-213ENST00000522504 KDM4DQ6B0I6 523 aa12.02□□□□□ -0.49
TRAPPC9-213ENST00000522504 LCNL1Q6ZST4 164 aa12.02□□□□□ -0.49
TRAPPC9-213ENST00000522504 LHFPL2Q6ZUX7 228 aa12.02□□□□□ -0.49
TRAPPC9-213ENST00000522504 OR51A4Q8NGJ6 313 aa12.02□□□□□ -0.49
TRAPPC9-213ENST00000522504 OR2G2Q8NGZ5 317 aa12.02□□□□□ -0.49
TRAPPC9-213ENST00000522504 CHPT1Q8WUD6 406 aa12.02□□□□□ -0.49
TRAPPC9-213ENST00000522504 TOMM40LQ969M1 308 aa12.02□□□□□ -0.49
TRAPPC9-213ENST00000522504 RPEQ96AT9 228 aa12.02□□□□□ -0.49
TRAPPC9-213ENST00000522504 OPALINQ96PE5 141 aa12.02□□□□□ -0.49
TRAPPC9-213ENST00000522504 ZFP57Q9NU63 452 aa12.02□□□□□ -0.49
TRAPPC9-213ENST00000522504 FRRS1LQ9P0K9 344 aa12.02□□□□□ -0.49
TRAPPC9-213ENST00000522504 POMPQ9Y244 141 aa12.02□□□□□ -0.49
TRAPPC9-213ENST00000522504 STARD9Q9P2P6 4700 aa12.01□□□□□ -0.49
TRAPPC9-213ENST00000522504 FUOMA2VDF0 154 aa12.01□□□□□ -0.49
TRAPPC9-213ENST00000522504 ZNF729A6NN14 1252 aaPredicted RBP12.01□□□□□ -0.49
TRAPPC9-213ENST00000522504 J3QR06 171 aa12.01□□□□□ -0.49
TRAPPC9-213ENST00000522504 CCL24O00175 119 aa12.01□□□□□ -0.49
TRAPPC9-213ENST00000522504 TMEM11P17152 192 aa12.01□□□□□ -0.49
TRAPPC9-213ENST00000522504 HES1Q14469 280 aa12.01□□□□□ -0.49
TRAPPC9-213ENST00000522504 DEFB136Q30KP8 78 aa12.01□□□□□ -0.49
TRAPPC9-213ENST00000522504 UNQ9370/PRO34162Q6UXP9 181 aa12.01□□□□□ -0.49
TRAPPC9-213ENST00000522504 ZNF695Q8IW36 515 aa12.01□□□□□ -0.49
TRAPPC9-213ENST00000522504 OR13A1Q8NGR1 328 aa12.01□□□□□ -0.49
TRAPPC9-213ENST00000522504 OR9G1Q8NH87 305 aa12.01□□□□□ -0.49
TRAPPC9-213ENST00000522504 MBOAT4Q96T53 435 aa12.01□□□□□ -0.49
TRAPPC9-213ENST00000522504 LYSTQ99698 3801 aa12.01□□□□□ -0.49
TRAPPC9-213ENST00000522504 ASCL2Q99929 193 aa12.01□□□□□ -0.49
TRAPPC9-213ENST00000522504 PSG11Q9UQ72 335 aa12.01□□□□□ -0.49
TRAPPC9-213ENST00000522504 HSPB6O14558 160 aa12□□□□□ -0.49
TRAPPC9-213ENST00000522504 DEGS1O15121 323 aa12□□□□□ -0.49
TRAPPC9-213ENST00000522504 IGKV1D-33P01593 117 aa12□□□□□ -0.49
TRAPPC9-213ENST00000522504 IGKV1-33P01594 117 aa12□□□□□ -0.49
TRAPPC9-213ENST00000522504 IGHG2P01859 326 aa12□□□□□ -0.49
TRAPPC9-213ENST00000522504 RPLP1P05386 114 aaKnown RBP12□□□□□ -0.49
TRAPPC9-213ENST00000522504 ZNF20P17024 532 aa12□□□□□ -0.49
TRAPPC9-213ENST00000522504 RAB25P57735 213 aa12□□□□□ -0.49
TRAPPC9-213ENST00000522504 DCTN2Q13561 401 aaKnown RBP12□□□□□ -0.49
TRAPPC9-213ENST00000522504 TMEM244Q5VVB8 128 aa12□□□□□ -0.49
TRAPPC9-213ENST00000522504 SLC35E3Q7Z769 313 aa12□□□□□ -0.49
TRAPPC9-213ENST00000522504 STPG2Q8N412 459 aa12□□□□□ -0.49
TRAPPC9-213ENST00000522504 OR51T1Q8NGJ9 327 aa12□□□□□ -0.49
TRAPPC9-213ENST00000522504 OR13C9Q8NGT0 318 aa12□□□□□ -0.49
TRAPPC9-213ENST00000522504 EME1Q96AY2 570 aa12□□□□□ -0.49
TRAPPC9-213ENST00000522504 SPSB1Q96BD6 273 aa12□□□□□ -0.49
TRAPPC9-213ENST00000522504 RBMXL1Q96E39 390 aaKnown RBP12□□□□□ -0.49
TRAPPC9-213ENST00000522504 HRASLS5Q96KN8 279 aa12□□□□□ -0.49
TRAPPC9-213ENST00000522504 DCLRE1BQ9H816 532 aa12□□□□□ -0.49
TRAPPC9-213ENST00000522504 CALYQ9NYX4 217 aa12□□□□□ -0.49
TRAPPC9-213ENST00000522504 KIF25Q9UIL4 384 aa12□□□□□ -0.49
TRAPPC9-213ENST00000522504 TRAV39A0A0B4J263 110 aa11.99□□□□□ -0.49
TRAPPC9-213ENST00000522504 TRAV24A0A0B4J272 114 aa11.99□□□□□ -0.49
TRAPPC9-213ENST00000522504 A0A1W2PPE3 182 aa11.99□□□□□ -0.49
TRAPPC9-213ENST00000522504 G3V2T6 193 aa11.99□□□□□ -0.49
TRAPPC9-213ENST00000522504 FGF16O43320 207 aa11.99□□□□□ -0.49
TRAPPC9-213ENST00000522504 MT-ND2P03891 347 aa11.99□□□□□ -0.49
TRAPPC9-213ENST00000522504 ISG15P05161 165 aa11.99□□□□□ -0.49
TRAPPC9-213ENST00000522504 SLC6A1P30531 599 aa11.99□□□□□ -0.49
TRAPPC9-213ENST00000522504 GLP1RP43220 463 aa11.99□□□□□ -0.49
TRAPPC9-213ENST00000522504 GNG10P50151 68 aa11.99□□□□□ -0.49
TRAPPC9-213ENST00000522504 ZP1P60852 638 aa11.99□□□□□ -0.49
TRAPPC9-213ENST00000522504 LTC4SQ16873 150 aa11.99□□□□□ -0.49
TRAPPC9-213ENST00000522504 CHST4Q8NCG5 386 aa11.99□□□□□ -0.49
TRAPPC9-213ENST00000522504 RFESDQ8TAC1 157 aa11.99□□□□□ -0.49
TRAPPC9-213ENST00000522504 CIB1Q99828 191 aa11.99□□□□□ -0.49
TRAPPC9-213ENST00000522504 OSBPL10Q9BXB5 764 aa11.99□□□□□ -0.49
TRAPPC9-213ENST00000522504 LINC00574Q9H8X3 128 aa11.99□□□□□ -0.49
TRAPPC9-213ENST00000522504 PCDHB16Q9NRJ7 776 aa11.99□□□□□ -0.49
TRAPPC9-213ENST00000522504 OR6C3Q9NZP0 311 aa11.99□□□□□ -0.49
TRAPPC9-213ENST00000522504 SCOCQ9UIL1 159 aa11.99□□□□□ -0.49
TRAPPC9-213ENST00000522504 RAMP3O60896 148 aa11.98□□□□□ -0.49
TRAPPC9-213ENST00000522504 SSTR5P35346 364 aa11.98□□□□□ -0.49
TRAPPC9-213ENST00000522504 ATP6V1E1P36543 226 aa11.98□□□□□ -0.49
TRAPPC9-213ENST00000522504 SLC35B1P78383 322 aa11.98□□□□□ -0.49
TRAPPC9-213ENST00000522504 MADCAM1Q13477 382 aa11.98□□□□□ -0.49
TRAPPC9-213ENST00000522504 ATP6AP1Q15904 470 aa11.98□□□□□ -0.49
TRAPPC9-213ENST00000522504 FAM220AQ7Z4H9 259 aa11.98□□□□□ -0.49
TRAPPC9-213ENST00000522504 SAXO1Q8IYX7 474 aa11.98□□□□□ -0.49
TRAPPC9-213ENST00000522504 NEK6Q9HC98 313 aa11.98□□□□□ -0.49
TRAPPC9-213ENST00000522504 IDI2-AS1Q9NZ38 188 aa11.98□□□□□ -0.49
TRAPPC9-213ENST00000522504 ZNF581Q9P0T4 197 aa11.98□□□□□ -0.49
TRAPPC9-213ENST00000522504 MYRFQ9Y2G1 1151 aa11.98□□□□□ -0.49
TRAPPC9-213ENST00000522504 AMMECR1Q9Y4X0 333 aaPredicted RBP11.98□□□□□ -0.49
TRAPPC9-213ENST00000522504 CSMD3Q7Z407 3707 aa11.97□□□□□ -0.49
TRAPPC9-213ENST00000522504 MEIKINA0A087WXM9 373 aa11.97□□□□□ -0.49
TRAPPC9-213ENST00000522504 IGHV3-72A0A0B4J1Y9 119 aa11.97□□□□□ -0.49
TRAPPC9-213ENST00000522504 NPIPB11E5RHQ5 1161 aa11.97□□□□□ -0.49
TRAPPC9-213ENST00000522504 H0YJX3 145 aa11.97□□□□□ -0.49
TRAPPC9-213ENST00000522504 J3QRE1 110 aa11.97□□□□□ -0.49
TRAPPC9-213ENST00000522504 IL1AP01583 271 aa11.97□□□□□ -0.49
TRAPPC9-213ENST00000522504 GPR12P47775 334 aa11.97□□□□□ -0.49
TRAPPC9-213ENST00000522504 REG1BP48304 166 aa11.97□□□□□ -0.49
TRAPPC9-213ENST00000522504 FAM53AQ6NSI3 398 aaPredicted RBP11.97□□□□□ -0.49
TRAPPC9-213ENST00000522504 FDX2Q6P4F2 183 aa11.97□□□□□ -0.49
TRAPPC9-213ENST00000522504 OR8H3Q8N146 312 aa11.97□□□□□ -0.49
TRAPPC9-213ENST00000522504 COMMD1Q8N668 190 aa11.97□□□□□ -0.49
TRAPPC9-213ENST00000522504 Q8N6K4 173 aa11.97□□□□□ -0.49
TRAPPC9-213ENST00000522504 OR13C3Q8NGS6 347 aa11.97□□□□□ -0.49
TRAPPC9-213ENST00000522504 PLPPR1Q8TBJ4 325 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms