RNA–Protein interactions for RNA: ENST00000522240.1

CPNE3-205, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-205ENST00000522240 H7C1Q1 480 aa10.91□□□□□ -0.66
CPNE3-205ENST00000522240 SIGLEC5O15389 551 aa10.91□□□□□ -0.66
CPNE3-205ENST00000522240 NDUFA2O43678 99 aa10.91□□□□□ -0.66
CPNE3-205ENST00000522240 ZNF737O75373 536 aa10.91□□□□□ -0.66
CPNE3-205ENST00000522240 RBBP9O75884 186 aa10.91□□□□□ -0.66
CPNE3-205ENST00000522240 ECDO95905 644 aaPredicted RBP10.91□□□□□ -0.66
CPNE3-205ENST00000522240 IGHV2-70P01814 119 aa10.91□□□□□ -0.66
CPNE3-205ENST00000522240 COL8A2P25067 703 aa10.91□□□□□ -0.66
CPNE3-205ENST00000522240 AP3S2P59780 193 aa10.91□□□□□ -0.66
CPNE3-205ENST00000522240 SCN1BQ07699 218 aa10.91□□□□□ -0.66
CPNE3-205ENST00000522240 RNASE12Q5GAN4 147 aaKnown RBP10.91□□□□□ -0.66
CPNE3-205ENST00000522240 SFRP4Q6FHJ7 346 aaPredicted RBP10.91□□□□□ -0.66
CPNE3-205ENST00000522240 ZNF788Q6ZQV5 615 aa10.91□□□□□ -0.66
CPNE3-205ENST00000522240 LYSMD2Q8IV50 215 aa10.91□□□□□ -0.66
CPNE3-205ENST00000522240 GAPTQ8N292 157 aa10.91□□□□□ -0.66
CPNE3-205ENST00000522240 TIMD4Q96H15 378 aa10.91□□□□□ -0.66
CPNE3-205ENST00000522240 SNX22Q96L94 193 aa10.91□□□□□ -0.66
CPNE3-205ENST00000522240 GAFA1Q96PS6 74 aa10.91□□□□□ -0.66
CPNE3-205ENST00000522240 FAAP24Q9BTP7 215 aa10.91□□□□□ -0.66
CPNE3-205ENST00000522240 FAM234AQ9H0X4 552 aa10.91□□□□□ -0.66
CPNE3-205ENST00000522240 ZNF665Q9H7R5 613 aa10.91□□□□□ -0.66
CPNE3-205ENST00000522240 IFT46Q9NQC8 304 aa10.91□□□□□ -0.66
CPNE3-205ENST00000522240 ETAA1Q9NY74 926 aa10.91□□□□□ -0.66
CPNE3-205ENST00000522240 KAAG1Q9UBP8 84 aa10.91□□□□□ -0.66
CPNE3-205ENST00000522240 HIVEP1P15822 2718 aa10.9□□□□□ -0.66
CPNE3-205ENST00000522240 TRBV6-6A0A0A6YYG2 114 aa10.9□□□□□ -0.66
CPNE3-205ENST00000522240 TMEM82A0PJX8 343 aa10.9□□□□□ -0.66
CPNE3-205ENST00000522240 UBE2QL1A1L167 161 aa10.9□□□□□ -0.66
CPNE3-205ENST00000522240 LYNX1G3V0Z9 82 aa10.9□□□□□ -0.66
CPNE3-205ENST00000522240 HSPB6O14558 160 aa10.9□□□□□ -0.66
CPNE3-205ENST00000522240 LANCL1O43813 399 aa10.9□□□□□ -0.66
CPNE3-205ENST00000522240 PSPNO60542 156 aa10.9□□□□□ -0.66
CPNE3-205ENST00000522240 NAPSAO96009 420 aa10.9□□□□□ -0.66
CPNE3-205ENST00000522240 GYPAP02724 150 aa10.9□□□□□ -0.66
CPNE3-205ENST00000522240 FCGR3AP08637 254 aa10.9□□□□□ -0.66
CPNE3-205ENST00000522240 CSF1P09603 554 aa10.9□□□□□ -0.66
CPNE3-205ENST00000522240 GSTT2BP0CG30 244 aa10.9□□□□□ -0.66
CPNE3-205ENST00000522240 LYNX1P0DP58 116 aa10.9□□□□□ -0.66
CPNE3-205ENST00000522240 NAT1P18440 290 aa10.9□□□□□ -0.66
CPNE3-205ENST00000522240 AMY2BP19961 511 aa10.9□□□□□ -0.66
CPNE3-205ENST00000522240 RBMXP38159 391 aaKnown RBP10.9□□□□□ -0.66
CPNE3-205ENST00000522240 GABRA2P47869 451 aa10.9□□□□□ -0.66
CPNE3-205ENST00000522240 OR3A1P47881 315 aa10.9□□□□□ -0.66
CPNE3-205ENST00000522240 INPP1P49441 399 aa10.9□□□□□ -0.66
CPNE3-205ENST00000522240 RIPPLY3P57055 190 aa10.9□□□□□ -0.66
CPNE3-205ENST00000522240 TMEM33P57088 247 aa10.9□□□□□ -0.66
CPNE3-205ENST00000522240 IL13RA1P78552 427 aa10.9□□□□□ -0.66
CPNE3-205ENST00000522240 ZMYND11Q15326 602 aa10.9□□□□□ -0.66
CPNE3-205ENST00000522240 SRSF7Q16629 238 aaKnown RBP eCLIP10.9□□□□□ -0.66
CPNE3-205ENST00000522240 TMEM155Q4W5P6 130 aa10.9□□□□□ -0.66
CPNE3-205ENST00000522240 STEAP3Q658P3 488 aa10.9□□□□□ -0.66
CPNE3-205ENST00000522240 C17orf107Q6ZR85 190 aa10.9□□□□□ -0.66
CPNE3-205ENST00000522240 DCDC5Q6ZRR9 648 aa10.9□□□□□ -0.66
CPNE3-205ENST00000522240 MOB1BQ7L9L4 216 aa10.9□□□□□ -0.66
CPNE3-205ENST00000522240 SLC36A1Q7Z2H8 476 aa10.9□□□□□ -0.66
CPNE3-205ENST00000522240 ASCC1Q8N9N2 400 aaKnown RBP10.9□□□□□ -0.66
CPNE3-205ENST00000522240 C19orf18Q8NEA5 215 aa10.9□□□□□ -0.66
CPNE3-205ENST00000522240 OR5T2Q8NGG2 359 aa10.9□□□□□ -0.66
CPNE3-205ENST00000522240 SETD6Q8TBK2 473 aa10.9□□□□□ -0.66
CPNE3-205ENST00000522240 RAB1CQ92928 201 aa10.9□□□□□ -0.66
CPNE3-205ENST00000522240 C7orf50Q9BRJ6 194 aaKnown RBP10.9□□□□□ -0.66
CPNE3-205ENST00000522240 PPA2Q9H2U2 334 aa10.9□□□□□ -0.66
CPNE3-205ENST00000522240 TMEM165Q9HC07 324 aa10.9□□□□□ -0.66
CPNE3-205ENST00000522240 EDARQ9UNE0 448 aa10.9□□□□□ -0.66
CPNE3-205ENST00000522240 DCHS2Q6V1P9 2916 aa10.89□□□□□ -0.67
CPNE3-205ENST00000522240 ANKRD20A5PA0PJZ0 165 aa10.89□□□□□ -0.67
CPNE3-205ENST00000522240 K7N7A8 449 aa10.89□□□□□ -0.67
CPNE3-205ENST00000522240 TNFRSF13BO14836 293 aaPredicted RBP10.89□□□□□ -0.67
CPNE3-205ENST00000522240 MGST3O14880 152 aa10.89□□□□□ -0.67
CPNE3-205ENST00000522240 ORC5O43913 435 aa10.89□□□□□ -0.67
CPNE3-205ENST00000522240 NDUFS7O75251 213 aa10.89□□□□□ -0.67
CPNE3-205ENST00000522240 LY6HO94772 140 aa10.89□□□□□ -0.67
CPNE3-205ENST00000522240 ZNF205O95201 554 aa10.89□□□□□ -0.67
CPNE3-205ENST00000522240 AVPP01185 164 aa10.89□□□□□ -0.67
CPNE3-205ENST00000522240 IGHV4-39P01824 125 aa10.89□□□□□ -0.67
CPNE3-205ENST00000522240 TBPP20226 339 aa10.89□□□□□ -0.67
CPNE3-205ENST00000522240 DEFA1P59665 94 aa10.89□□□□□ -0.67
CPNE3-205ENST00000522240 DEFA3P59666 94 aa10.89□□□□□ -0.67
CPNE3-205ENST00000522240 IFITM3Q01628 133 aa10.89□□□□□ -0.67
CPNE3-205ENST00000522240 DYRK1AQ13627 763 aa10.89□□□□□ -0.67
CPNE3-205ENST00000522240 KLF9Q13886 244 aaPredicted RBP10.89□□□□□ -0.67
CPNE3-205ENST00000522240 ATXN7L3Q14CW9 347 aaPredicted RBP10.89□□□□□ -0.67
CPNE3-205ENST00000522240 RSBN1Q5VWQ0 802 aaPredicted RBP10.89□□□□□ -0.67
CPNE3-205ENST00000522240 SLC35E4Q6ICL7 350 aa10.89□□□□□ -0.67
CPNE3-205ENST00000522240 ZNF497Q6ZNH5 498 aa10.89□□□□□ -0.67
CPNE3-205ENST00000522240 Q6ZS49 121 aa10.89□□□□□ -0.67
CPNE3-205ENST00000522240 HOGA1Q86XE5 327 aa10.89□□□□□ -0.67
CPNE3-205ENST00000522240 TOMM5Q8N4H5 51 aa10.89□□□□□ -0.67
CPNE3-205ENST00000522240 DEFB108BQ8NET1 73 aa10.89□□□□□ -0.67
CPNE3-205ENST00000522240 OR4S1Q8NGB4 309 aa10.89□□□□□ -0.67
CPNE3-205ENST00000522240 PLPPR1Q8TBJ4 325 aa10.89□□□□□ -0.67
CPNE3-205ENST00000522240 DYRK2Q92630 601 aa10.89□□□□□ -0.67
CPNE3-205ENST00000522240 MED30Q96HR3 178 aa10.89□□□□□ -0.67
CPNE3-205ENST00000522240 CYYR1Q96J86 154 aa10.89□□□□□ -0.67
CPNE3-205ENST00000522240 TMEM246Q9BRR3 403 aa10.89□□□□□ -0.67
CPNE3-205ENST00000522240 HDHD3Q9BSH5 251 aaPredicted RBP10.89□□□□□ -0.67
CPNE3-205ENST00000522240 GSX2Q9BZM3 304 aa10.89□□□□□ -0.67
CPNE3-205ENST00000522240 SHARPINQ9H0F6 387 aa10.89□□□□□ -0.67
CPNE3-205ENST00000522240 KLK11Q9UBX7 282 aa10.89□□□□□ -0.67
CPNE3-205ENST00000522240 MGAT4AQ9UM21 535 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms