RNA–Protein interactions for RNA: ENST00000521340.1

HMGN1P28-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 28, humanhuman

BASIC

Gene HMGN1P28, Length 364 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P28-201ENST00000521340 CDC40O60508 579 aaKnown RBP eCLIP2.01□□□□□ -2.09
HMGN1P28-201ENST00000521340 PROSCO94903 275 aa2.01□□□□□ -2.09
HMGN1P28-201ENST00000521340 PTHP01270 115 aa2.01□□□□□ -2.09
HMGN1P28-201ENST00000521340 IGKV1-39P01597 117 aa2.01□□□□□ -2.09
HMGN1P28-201ENST00000521340 APOA1P02647 267 aa2.01□□□□□ -2.09
HMGN1P28-201ENST00000521340 MT-ND4P03905 459 aa2.01□□□□□ -2.09
HMGN1P28-201ENST00000521340 IGKV1D-39P04432 117 aa2.01□□□□□ -2.09
HMGN1P28-201ENST00000521340 SLC35G6P0C7Q6 338 aa2.01□□□□□ -2.09
HMGN1P28-201ENST00000521340 TAC1P20366 129 aa2.01□□□□□ -2.09
HMGN1P28-201ENST00000521340 IL3RAP26951 378 aa2.01□□□□□ -2.09
HMGN1P28-201ENST00000521340 SLCO1A2P46721 670 aa2.01□□□□□ -2.09
HMGN1P28-201ENST00000521340 GCLMP48507 274 aa2.01□□□□□ -2.09
HMGN1P28-201ENST00000521340 RWDD2BP57060 319 aa2.01□□□□□ -2.09
HMGN1P28-201ENST00000521340 MTPNP58546 118 aa2.01□□□□□ -2.09
HMGN1P28-201ENST00000521340 SNAP25P60880 206 aa2.01□□□□□ -2.09
HMGN1P28-201ENST00000521340 GTF2BQ00403 316 aa2.01□□□□□ -2.09
HMGN1P28-201ENST00000521340 CAV1Q03135 178 aa2.01□□□□□ -2.09
HMGN1P28-201ENST00000521340 PPIDQ08752 370 aaKnown RBP2.01□□□□□ -2.09
HMGN1P28-201ENST00000521340 CDC20Q12834 499 aa2.01□□□□□ -2.09
HMGN1P28-201ENST00000521340 STX3Q13277 289 aa2.01□□□□□ -2.09
HMGN1P28-201ENST00000521340 GPR176Q14439 515 aa2.01□□□□□ -2.09
HMGN1P28-201ENST00000521340 C16orf72Q14CZ0 275 aa2.01□□□□□ -2.09
HMGN1P28-201ENST00000521340 TMED2Q15363 201 aa2.01□□□□□ -2.09
HMGN1P28-201ENST00000521340 GUSBP1Q15486 140 aa2.01□□□□□ -2.09
HMGN1P28-201ENST00000521340 TOMM34Q15785 309 aaPredicted RBP2.01□□□□□ -2.09
HMGN1P28-201ENST00000521340 CEACAM16Q2WEN9 425 aa2.01□□□□□ -2.09
HMGN1P28-201ENST00000521340 TEX30Q5JUR7 227 aa2.01□□□□□ -2.09
HMGN1P28-201ENST00000521340 BHLHA15Q7RTS1 189 aaPredicted RBP2.01□□□□□ -2.09
HMGN1P28-201ENST00000521340 LRRC52Q8N7C0 313 aa2.01□□□□□ -2.09
HMGN1P28-201ENST00000521340 LINC00469Q8N7U9 141 aa2.01□□□□□ -2.09
HMGN1P28-201ENST00000521340 UBAC2Q8NBM4 344 aa2.01□□□□□ -2.09
HMGN1P28-201ENST00000521340 OR2M7Q8NG81 312 aa2.01□□□□□ -2.09
HMGN1P28-201ENST00000521340 OR1J4Q8NGS1 313 aa2.01□□□□□ -2.09
HMGN1P28-201ENST00000521340 OR13G1Q8NGZ3 307 aa2.01□□□□□ -2.09
HMGN1P28-201ENST00000521340 LINC01560Q8TB33 94 aa2.01□□□□□ -2.09
HMGN1P28-201ENST00000521340 CDKL2Q92772 493 aa2.01□□□□□ -2.09
HMGN1P28-201ENST00000521340 KCNS3Q9BQ31 491 aa2.01□□□□□ -2.09
HMGN1P28-201ENST00000521340 ACBD6Q9BR61 282 aa2.01□□□□□ -2.09
HMGN1P28-201ENST00000521340 NDFIP1Q9BT67 221 aa2.01□□□□□ -2.09
HMGN1P28-201ENST00000521340 TIPINQ9BVW5 301 aa2.01□□□□□ -2.09
HMGN1P28-201ENST00000521340 C1orf198Q9H425 327 aa2.01□□□□□ -2.09
HMGN1P28-201ENST00000521340 PRORYQ9H606 182 aa2.01□□□□□ -2.09
HMGN1P28-201ENST00000521340 PLEKHA1Q9HB21 404 aa2.01□□□□□ -2.09
HMGN1P28-201ENST00000521340 EXOSC4Q9NPD3 245 aaKnown RBP2.01□□□□□ -2.09
HMGN1P28-201ENST00000521340 VAPAQ9P0L0 249 aa2.01□□□□□ -2.09
HMGN1P28-201ENST00000521340 NDRG2Q9UN36 371 aaKnown RBP2.01□□□□□ -2.09
HMGN1P28-201ENST00000521340 FARSAQ9Y285 508 aaKnown RBP2.01□□□□□ -2.09
HMGN1P28-201ENST00000521340 ARL2BPQ9Y2Y0 163 aa2.01□□□□□ -2.09
HMGN1P28-201ENST00000521340 SCN10AQ9Y5Y9 1956 aa2.01□□□□□ -2.09
HMGN1P28-201ENST00000521340 PTPRJQ12913 1337 aa2□□□□□ -2.09
HMGN1P28-201ENST00000521340 IGLV3-16A0A075B6K0 115 aa2□□□□□ -2.09
HMGN1P28-201ENST00000521340 hCG_1818297A0A087WSY0 165 aa2□□□□□ -2.09
HMGN1P28-201ENST00000521340 TRAV19A0A0A6YYK7 116 aa2□□□□□ -2.09
HMGN1P28-201ENST00000521340 FAM240AA0A1B0GVK7 77 aa2□□□□□ -2.09
HMGN1P28-201ENST00000521340 A0A1B0GW15 77 aa2□□□□□ -2.09
HMGN1P28-201ENST00000521340 EXOC1LA0A1B0GW35 172 aa2□□□□□ -2.09
HMGN1P28-201ENST00000521340 MGAT4DA6NG13 374 aa2□□□□□ -2.09
HMGN1P28-201ENST00000521340 SIGLEC16A6NMB1 481 aa2□□□□□ -2.09
HMGN1P28-201ENST00000521340 SEC14L6B5MCN3 397 aa2□□□□□ -2.09
HMGN1P28-201ENST00000521340 H7C2Y5 167 aa2□□□□□ -2.09
HMGN1P28-201ENST00000521340 M0R1X1 148 aa2□□□□□ -2.09
HMGN1P28-201ENST00000521340 MANBAO00462 879 aa2□□□□□ -2.09
HMGN1P28-201ENST00000521340 ZNF593O00488 134 aaPredicted RBP2□□□□□ -2.09
HMGN1P28-201ENST00000521340 RBFOX2O43251 390 aaKnown RBP eCLIP2□□□□□ -2.09
HMGN1P28-201ENST00000521340 EDF1O60869 148 aaKnown RBP2□□□□□ -2.09
HMGN1P28-201ENST00000521340 DCTN3O75935 186 aa2□□□□□ -2.09
HMGN1P28-201ENST00000521340 C1QAP02745 245 aa2□□□□□ -2.09
HMGN1P28-201ENST00000521340 RHOCP08134 193 aa2□□□□□ -2.09
HMGN1P28-201ENST00000521340 ADRA2AP08913 450 aa2□□□□□ -2.09
HMGN1P28-201ENST00000521340 GTF2H1P32780 548 aa2□□□□□ -2.09
HMGN1P28-201ENST00000521340 APLNRP35414 380 aa2□□□□□ -2.09
HMGN1P28-201ENST00000521340 PCK1P35558 622 aa2□□□□□ -2.09
HMGN1P28-201ENST00000521340 TALDO1P37837 337 aa2□□□□□ -2.09
HMGN1P28-201ENST00000521340 CMC4P56277 68 aaPredicted RBP2□□□□□ -2.09
HMGN1P28-201ENST00000521340 OR2B6P58173 313 aa2□□□□□ -2.09
HMGN1P28-201ENST00000521340 SLAMF1Q13291 335 aa2□□□□□ -2.09
HMGN1P28-201ENST00000521340 PTGES3Q15185 160 aaKnown RBP2□□□□□ -2.09
HMGN1P28-201ENST00000521340 SP6Q3SY56 376 aa2□□□□□ -2.09
HMGN1P28-201ENST00000521340 MFSD14CQ5VZR4 134 aa2□□□□□ -2.09
HMGN1P28-201ENST00000521340 ZFP1Q6P2D0 407 aa2□□□□□ -2.09
HMGN1P28-201ENST00000521340 PHF13Q86YI8 300 aaPredicted RBP2□□□□□ -2.09
HMGN1P28-201ENST00000521340 SLC35G3Q8N808 338 aa2□□□□□ -2.09
HMGN1P28-201ENST00000521340 SPANXA2-OT1Q8N9U9 137 aa2□□□□□ -2.09
HMGN1P28-201ENST00000521340 CYB561A3Q8NBI2 242 aa2□□□□□ -2.09
HMGN1P28-201ENST00000521340 TMEM161BQ8NDZ6 487 aa2□□□□□ -2.09
HMGN1P28-201ENST00000521340 OR4D6Q8NGJ1 314 aa2□□□□□ -2.09
HMGN1P28-201ENST00000521340 OR6K2Q8NGY2 324 aa2□□□□□ -2.09
HMGN1P28-201ENST00000521340 DCAKDQ8WVC6 231 aa2□□□□□ -2.09
HMGN1P28-201ENST00000521340 DYDC1Q8WWB3 177 aa2□□□□□ -2.09
HMGN1P28-201ENST00000521340 C1orf54Q8WWF1 131 aa2□□□□□ -2.09
HMGN1P28-201ENST00000521340 OR5P2Q8WZ92 322 aa2□□□□□ -2.09
HMGN1P28-201ENST00000521340 TNFRSF14Q92956 283 aa2□□□□□ -2.09
HMGN1P28-201ENST00000521340 ADTRPQ96IZ2 230 aa2□□□□□ -2.09
HMGN1P28-201ENST00000521340 TRABDQ9H4I3 376 aa2□□□□□ -2.09
HMGN1P28-201ENST00000521340 TREM1Q9NP99 234 aa2□□□□□ -2.09
HMGN1P28-201ENST00000521340 ACOT13Q9NPJ3 140 aa2□□□□□ -2.09
HMGN1P28-201ENST00000521340 XPNPEP1Q9NQW7 623 aa2□□□□□ -2.09
HMGN1P28-201ENST00000521340 BATF3Q9NR55 127 aa2□□□□□ -2.09
HMGN1P28-201ENST00000521340 NKIRAS1Q9NYS0 192 aa2□□□□□ -2.09
HMGN1P28-201ENST00000521340 CFL2Q9Y281 166 aa2□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms