RNA–Protein interactions for RNA: ENST00000520909.5

CLK4-207, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,305 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-207ENST00000520909 PRR14LQ5THK1 2151 aa3.2□□□□□ -1.9
CLK4-207ENST00000520909 DIDO1Q9BTC0 2240 aaKnown RBP3.2□□□□□ -1.9
CLK4-207ENST00000520909 BAHCC1Q9P281 2608 aa3.2□□□□□ -1.9
CLK4-207ENST00000520909 CFAP46Q8IYW2 2715 aa3.2□□□□□ -1.9
CLK4-207ENST00000520909 TRAV8-7A0A075B6U6 113 aa3.19□□□□□ -1.9
CLK4-207ENST00000520909 A0A087X0M5 115 aa3.19□□□□□ -1.9
CLK4-207ENST00000520909 ARPC4-TTLL3A0A0A6YYG9 625 aa3.19□□□□□ -1.9
CLK4-207ENST00000520909 TRAV1-2A0A0B4J238 106 aa3.19□□□□□ -1.9
CLK4-207ENST00000520909 A0A0U1RQV5 110 aa3.19□□□□□ -1.9
CLK4-207ENST00000520909 A0A1B0GX30 115 aa3.19□□□□□ -1.9
CLK4-207ENST00000520909 PDCD5O14737 125 aa3.19□□□□□ -1.9
CLK4-207ENST00000520909 MTRF1O75570 445 aaKnown RBP3.19□□□□□ -1.9
CLK4-207ENST00000520909 SC5DO75845 299 aa3.19□□□□□ -1.9
CLK4-207ENST00000520909 CLPXO76031 633 aa3.19□□□□□ -1.9
CLK4-207ENST00000520909 CD2P06729 351 aa3.19□□□□□ -1.9
CLK4-207ENST00000520909 ZNF14P17017 642 aaPredicted RBP3.19□□□□□ -1.9
CLK4-207ENST00000520909 SRMP19623 302 aa3.19□□□□□ -1.9
CLK4-207ENST00000520909 RAB3BP20337 219 aa3.19□□□□□ -1.9
CLK4-207ENST00000520909 PSMB1P20618 241 aaKnown RBP3.19□□□□□ -1.9
CLK4-207ENST00000520909 OTX1P32242 354 aaPredicted RBP3.19□□□□□ -1.9
CLK4-207ENST00000520909 ZNF83P51522 516 aa3.19□□□□□ -1.9
CLK4-207ENST00000520909 OR10A3P58181 314 aa3.19□□□□□ -1.9
CLK4-207ENST00000520909 ZNF92Q03936 586 aa3.19□□□□□ -1.9
CLK4-207ENST00000520909 GAGE2BQ13066 116 aa3.19□□□□□ -1.9
CLK4-207ENST00000520909 PPA1Q15181 289 aa3.19□□□□□ -1.9
CLK4-207ENST00000520909 IGFBP7Q16270 282 aa3.19□□□□□ -1.9
CLK4-207ENST00000520909 TBC1D28Q2M2D7 210 aa3.19□□□□□ -1.9
CLK4-207ENST00000520909 C15orf32Q32M92 178 aa3.19□□□□□ -1.9
CLK4-207ENST00000520909 GAGE2EQ4V326 116 aa3.19□□□□□ -1.9
CLK4-207ENST00000520909 GLYATL3Q5SZD4 288 aa3.19□□□□□ -1.9
CLK4-207ENST00000520909 IDNKQ5T6J7 187 aa3.19□□□□□ -1.9
CLK4-207ENST00000520909 GAGE2AQ6NT46 116 aa3.19□□□□□ -1.9
CLK4-207ENST00000520909 GLDNQ6ZMI3 551 aaPredicted RBP3.19□□□□□ -1.9
CLK4-207ENST00000520909 TPRA1Q86W33 373 aa3.19□□□□□ -1.9
CLK4-207ENST00000520909 C17orf78Q8N4C9 275 aa3.19□□□□□ -1.9
CLK4-207ENST00000520909 Q8N7P7 452 aa3.19□□□□□ -1.9
CLK4-207ENST00000520909 RELL2Q8NC24 303 aaPredicted RBP3.19□□□□□ -1.9
CLK4-207ENST00000520909 OR5L1Q8NGL2 311 aa3.19□□□□□ -1.9
CLK4-207ENST00000520909 OR5D14Q8NGL3 314 aa3.19□□□□□ -1.9
CLK4-207ENST00000520909 OR2AE1Q8NHA4 323 aa3.19□□□□□ -1.9
CLK4-207ENST00000520909 TMEM106AQ96A25 262 aa3.19□□□□□ -1.9
CLK4-207ENST00000520909 SLC25A46Q96AG3 418 aa3.19□□□□□ -1.9
CLK4-207ENST00000520909 SGK3Q96BR1 496 aa3.19□□□□□ -1.9
CLK4-207ENST00000520909 ADAT3Q96EY9 351 aaPredicted RBP3.19□□□□□ -1.9
CLK4-207ENST00000520909 REEP6Q96HR9 211 aa3.19□□□□□ -1.9
CLK4-207ENST00000520909 SGK494Q96LW2 274 aa3.19□□□□□ -1.9
CLK4-207ENST00000520909 MED18Q9BUE0 208 aa3.19□□□□□ -1.9
CLK4-207ENST00000520909 TRAF4Q9BUZ4 470 aaPredicted RBP3.19□□□□□ -1.9
CLK4-207ENST00000520909 ACTR6Q9GZN1 396 aa3.19□□□□□ -1.9
CLK4-207ENST00000520909 SLIRPQ9GZT3 109 aaKnown RBP3.19□□□□□ -1.9
CLK4-207ENST00000520909 C6orf62Q9GZU0 229 aaPredicted RBP3.19□□□□□ -1.9
CLK4-207ENST00000520909 OR51B6Q9H340 312 aa3.19□□□□□ -1.9
CLK4-207ENST00000520909 ABCB10Q9NRK6 738 aa3.19□□□□□ -1.9
CLK4-207ENST00000520909 ZNF275Q9NSD4 429 aaPredicted RBP3.19□□□□□ -1.9
CLK4-207ENST00000520909 TAS2R4Q9NYW5 299 aa3.19□□□□□ -1.9
CLK4-207ENST00000520909 PTTG3PQ9NZH4 202 aa3.19□□□□□ -1.9
CLK4-207ENST00000520909 CCDC59Q9P031 241 aaKnown RBP3.19□□□□□ -1.9
CLK4-207ENST00000520909 CRNNQ9UBG3 495 aaPredicted RBP3.19□□□□□ -1.9
CLK4-207ENST00000520909 EIF3KQ9UBQ5 218 aaKnown RBP3.19□□□□□ -1.9
CLK4-207ENST00000520909 CKLFQ9UBR5 152 aa3.19□□□□□ -1.9
CLK4-207ENST00000520909 GAGE2DQ9UEU5 116 aa3.19□□□□□ -1.9
CLK4-207ENST00000520909 ATPIF1Q9UII2 106 aa3.19□□□□□ -1.9
CLK4-207ENST00000520909 DAPK2Q9UIK4 370 aa3.19□□□□□ -1.9
CLK4-207ENST00000520909 PPP1R3CQ9UQK1 317 aa3.19□□□□□ -1.9
CLK4-207ENST00000520909 PIGLQ9Y2B2 252 aa3.19□□□□□ -1.9
CLK4-207ENST00000520909 STARD10Q9Y365 291 aa3.19□□□□□ -1.9
CLK4-207ENST00000520909 AK6Q9Y3D8 172 aaKnown RBP3.19□□□□□ -1.9
CLK4-207ENST00000520909 SLC25A15Q9Y619 301 aa3.19□□□□□ -1.9
CLK4-207ENST00000520909 SHANK1Q9Y566 2161 aa3.19□□□□□ -1.9
CLK4-207ENST00000520909 SMG1Q96Q15 3661 aaKnown RBP3.19□□□□□ -1.9
CLK4-207ENST00000520909 SPTBN1Q01082 2364 aaKnown RBP3.19□□□□□ -1.9
CLK4-207ENST00000520909 ARHGAP21Q5T5U3 1957 aa3.19□□□□□ -1.9
CLK4-207ENST00000520909 A0A0B4J203 849 aa3.19□□□□□ -1.9
CLK4-207ENST00000520909 IGHV1-18A0A0C4DH31 117 aa3.19□□□□□ -1.9
CLK4-207ENST00000520909 A0A1B0GUH1 482 aa3.19□□□□□ -1.9
CLK4-207ENST00000520909 GGT3PA6NGU5 568 aa3.19□□□□□ -1.9
CLK4-207ENST00000520909 ANXA2P2A6NMY6 339 aa3.19□□□□□ -1.9
CLK4-207ENST00000520909 M0R1B8 84 aa3.19□□□□□ -1.9
CLK4-207ENST00000520909 CTDSP2O14595 271 aa3.19□□□□□ -1.9
CLK4-207ENST00000520909 RGS5O15539 181 aa3.19□□□□□ -1.9
CLK4-207ENST00000520909 XRCC2O43543 280 aa3.19□□□□□ -1.9
CLK4-207ENST00000520909 DHRS3O75911 302 aa3.19□□□□□ -1.9
CLK4-207ENST00000520909 MAS1P04201 325 aa3.19□□□□□ -1.9
CLK4-207ENST00000520909 PRB1P04280 392 aa3.19□□□□□ -1.9
CLK4-207ENST00000520909 CECR9P0C854 216 aa3.19□□□□□ -1.9
CLK4-207ENST00000520909 OCMP0CE72 109 aaPredicted RBP3.19□□□□□ -1.9
CLK4-207ENST00000520909 SLC2A2P11168 524 aaPredicted RBP3.19□□□□□ -1.9
CLK4-207ENST00000520909 RAB3AP20336 220 aa3.19□□□□□ -1.9
CLK4-207ENST00000520909 CCL1P22362 96 aa3.19□□□□□ -1.9
CLK4-207ENST00000520909 CFL1P23528 166 aaKnown RBP3.19□□□□□ -1.9
CLK4-207ENST00000520909 S100A5P33763 92 aa3.19□□□□□ -1.9
CLK4-207ENST00000520909 DDOSTP39656 456 aa3.19□□□□□ -1.9
CLK4-207ENST00000520909 UQCRFS1P47985 274 aa3.19□□□□□ -1.9
CLK4-207ENST00000520909 ASCL1P50553 236 aa3.19□□□□□ -1.9
CLK4-207ENST00000520909 PSMD7P51665 324 aa3.19□□□□□ -1.9
CLK4-207ENST00000520909 PPP1CBP62140 327 aa3.19□□□□□ -1.9
CLK4-207ENST00000520909 PPP3R1P63098 170 aa3.19□□□□□ -1.9
CLK4-207ENST00000520909 DLK1P80370 383 aa3.19□□□□□ -1.9
CLK4-207ENST00000520909 RIPPLY1Q0D2K3 151 aa3.19□□□□□ -1.9
CLK4-207ENST00000520909 TAB1Q15750 504 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms