RNA–Protein interactions for RNA: ENST00000520417.1

SKP1-207, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-207ENST00000520417 SSX6Q7RTT6 188 aa1.31□□□□□ -2.2
SKP1-207ENST00000520417 FER1L6-AS1Q8NA97 138 aa1.31□□□□□ -2.2
SKP1-207ENST00000520417 OR4K17Q8NGC6 315 aa1.31□□□□□ -2.2
SKP1-207ENST00000520417 LGALS14Q8TCE9 139 aa1.31□□□□□ -2.2
SKP1-207ENST00000520417 CIDECQ96AQ7 238 aaPredicted RBP1.31□□□□□ -2.2
SKP1-207ENST00000520417 ZMYND19Q96E35 227 aaPredicted RBP1.31□□□□□ -2.2
SKP1-207ENST00000520417 BIRC8Q96P09 236 aa1.31□□□□□ -2.2
SKP1-207ENST00000520417 HINT2Q9BX68 163 aa1.31□□□□□ -2.2
SKP1-207ENST00000520417 BCL2L14Q9BZR8 327 aa1.31□□□□□ -2.2
SKP1-207ENST00000520417 OR5V1Q9UGF6 321 aa1.31□□□□□ -2.2
SKP1-207ENST00000520417 DYSFO75923 2080 aa1.31□□□□□ -2.2
SKP1-207ENST00000520417 NOS1P29475 1434 aa1.31□□□□□ -2.2
SKP1-207ENST00000520417 TRBV24-1A0A075B6N3 115 aa1.3□□□□□ -2.2
SKP1-207ENST00000520417 IGHV1-45A0A0A0MS14 117 aa1.3□□□□□ -2.2
SKP1-207ENST00000520417 A0A1B0GU33 70 aa1.3□□□□□ -2.2
SKP1-207ENST00000520417 GOLGA8IPA6NC78 632 aa1.3□□□□□ -2.2
SKP1-207ENST00000520417 ARGFXA6NJG6 315 aa1.3□□□□□ -2.2
SKP1-207ENST00000520417 I3L4J1 428 aa1.3□□□□□ -2.2
SKP1-207ENST00000520417 hCG_2039718K7EN88 272 aa1.3□□□□□ -2.2
SKP1-207ENST00000520417 UBDO15205 165 aa1.3□□□□□ -2.2
SKP1-207ENST00000520417 CRTAPO75718 401 aaPredicted RBP1.3□□□□□ -2.2
SKP1-207ENST00000520417 IGKV5-2P06315 115 aa1.3□□□□□ -2.2
SKP1-207ENST00000520417 CCDC172P0C7W6 258 aa1.3□□□□□ -2.2
SKP1-207ENST00000520417 CGB3P0DN86 165 aa1.3□□□□□ -2.2
SKP1-207ENST00000520417 CGB7P0DN87 165 aa1.3□□□□□ -2.2
SKP1-207ENST00000520417 CTLA4P16410 223 aa1.3□□□□□ -2.2
SKP1-207ENST00000520417 GZMHP20718 246 aa1.3□□□□□ -2.2
SKP1-207ENST00000520417 PSMB9P28065 219 aa1.3□□□□□ -2.2
SKP1-207ENST00000520417 VSNL1P62760 191 aa1.3□□□□□ -2.2
SKP1-207ENST00000520417 HBG1P69891 147 aa1.3□□□□□ -2.2
SKP1-207ENST00000520417 HBG2P69892 147 aa1.3□□□□□ -2.2
SKP1-207ENST00000520417 TRAM1Q15629 374 aa1.3□□□□□ -2.2
SKP1-207ENST00000520417 TRIP13Q15645 432 aaPredicted RBP1.3□□□□□ -2.2
SKP1-207ENST00000520417 NOXRED1Q6NXP6 359 aa1.3□□□□□ -2.2
SKP1-207ENST00000520417 ZNF322Q6U7Q0 402 aaPredicted RBP1.3□□□□□ -2.2
SKP1-207ENST00000520417 MARCH3Q86UD3 253 aa1.3□□□□□ -2.2
SKP1-207ENST00000520417 Q8NAQ8 132 aa1.3□□□□□ -2.2
SKP1-207ENST00000520417 GATD1Q8NB37 220 aa1.3□□□□□ -2.2
SKP1-207ENST00000520417 OR8K1Q8NGG5 319 aa1.3□□□□□ -2.2
SKP1-207ENST00000520417 OR4K13Q8NH42 304 aa1.3□□□□□ -2.2
SKP1-207ENST00000520417 MFSD8Q8NHS3 518 aa1.3□□□□□ -2.2
SKP1-207ENST00000520417 LRRC20Q8TCA0 184 aa1.3□□□□□ -2.2
SKP1-207ENST00000520417 IFT81Q8WYA0 676 aa1.3□□□□□ -2.2
SKP1-207ENST00000520417 MAL2Q969L2 176 aa1.3□□□□□ -2.2
SKP1-207ENST00000520417 HIST1H2BAQ96A08 127 aa1.3□□□□□ -2.2
SKP1-207ENST00000520417 RAD51AP1Q96B01 352 aa1.3□□□□□ -2.2
SKP1-207ENST00000520417 CPB2Q96IY4 423 aa1.3□□□□□ -2.2
SKP1-207ENST00000520417 C20orf166-AS1Q96NR2 134 aa1.3□□□□□ -2.2
SKP1-207ENST00000520417 TSSK6Q9BXA6 273 aa1.3□□□□□ -2.2
SKP1-207ENST00000520417 OR2D2Q9H210 308 aa1.3□□□□□ -2.2
SKP1-207ENST00000520417 TMBIM4Q9HC24 238 aa1.3□□□□□ -2.2
SKP1-207ENST00000520417 KCNIP2Q9NS61 270 aa1.3□□□□□ -2.2
SKP1-207ENST00000520417 POMPQ9Y244 141 aa1.3□□□□□ -2.2
SKP1-207ENST00000520417 BTRCQ9Y297 605 aa1.3□□□□□ -2.2
SKP1-207ENST00000520417 POLR3AO14802 1390 aaPredicted RBP1.3□□□□□ -2.2
SKP1-207ENST00000520417 VWA8A3KMH1 1905 aa1.29□□□□□ -2.2
SKP1-207ENST00000520417 IGKV1D-37A0A075B6S9 117 aa1.29□□□□□ -2.2
SKP1-207ENST00000520417 A0A1W2PRG6 482 aa1.29□□□□□ -2.2
SKP1-207ENST00000520417 G3V3Q6 166 aa1.29□□□□□ -2.2
SKP1-207ENST00000520417 KLRC4-KLRK1H3BQV0 150 aa1.29□□□□□ -2.2
SKP1-207ENST00000520417 NDUFS8O00217 210 aa1.29□□□□□ -2.2
SKP1-207ENST00000520417 TP53I11O14683 189 aa1.29□□□□□ -2.2
SKP1-207ENST00000520417 SH2D1AO60880 128 aa1.29□□□□□ -2.2
SKP1-207ENST00000520417 OPN1SWP03999 348 aa1.29□□□□□ -2.2
SKP1-207ENST00000520417 OR12D1P0DN82 309 aa1.29□□□□□ -2.2
SKP1-207ENST00000520417 ZNF22P17026 224 aaPredicted RBP1.29□□□□□ -2.2
SKP1-207ENST00000520417 PYCR1P32322 319 aa1.29□□□□□ -2.2
SKP1-207ENST00000520417 RPA3P35244 121 aaPredicted RBP1.29□□□□□ -2.2
SKP1-207ENST00000520417 FUSP35637 526 aaKnown RBP eCLIP1.29□□□□□ -2.2
SKP1-207ENST00000520417 UBE2KP61086 200 aa1.29□□□□□ -2.2
SKP1-207ENST00000520417 TSPAN5P62079 268 aa1.29□□□□□ -2.2
SKP1-207ENST00000520417 TNNC1P63316 161 aa1.29□□□□□ -2.2
SKP1-207ENST00000520417 CASP8Q14790 479 aa1.29□□□□□ -2.2
SKP1-207ENST00000520417 ZNF181Q2M3W8 571 aa1.29□□□□□ -2.2
SKP1-207ENST00000520417 PYCR3Q53H96 274 aa1.29□□□□□ -2.2
SKP1-207ENST00000520417 SPNS3Q6ZMD2 512 aa1.29□□□□□ -2.2
SKP1-207ENST00000520417 OLIG3Q7RTU3 272 aa1.29□□□□□ -2.2
SKP1-207ENST00000520417 FAM19A1Q7Z5A9 133 aa1.29□□□□□ -2.2
SKP1-207ENST00000520417 SPICQ8N5J4 248 aa1.29□□□□□ -2.2
SKP1-207ENST00000520417 TRIML2Q8N7C3 387 aa1.29□□□□□ -2.2
SKP1-207ENST00000520417 OR10D4PQ8NGN7 298 aa1.29□□□□□ -2.2
SKP1-207ENST00000520417 OR4A5Q8NH83 315 aa1.29□□□□□ -2.2
SKP1-207ENST00000520417 LMX1AQ8TE12 382 aa1.29□□□□□ -2.2
SKP1-207ENST00000520417 REEP6Q96HR9 211 aa1.29□□□□□ -2.2
SKP1-207ENST00000520417 CATSPER2Q96P56 530 aa1.29□□□□□ -2.2
SKP1-207ENST00000520417 SUCNR1Q9BXA5 334 aa1.29□□□□□ -2.2
SKP1-207ENST00000520417 PRRG3Q9BZD7 231 aa1.29□□□□□ -2.2
SKP1-207ENST00000520417 ARL6Q9H0F7 186 aa1.29□□□□□ -2.2
SKP1-207ENST00000520417 MFSD1Q9H3U5 465 aa1.29□□□□□ -2.2
SKP1-207ENST00000520417 RMND1Q9NWS8 449 aa1.29□□□□□ -2.2
SKP1-207ENST00000520417 RBMX2Q9Y388 322 aaKnown RBP1.29□□□□□ -2.2
SKP1-207ENST00000520417 TNIKQ9UKE5 1360 aa1.29□□□□□ -2.2
SKP1-207ENST00000520417 TMEM131Q92545 1883 aa1.29□□□□□ -2.2
SKP1-207ENST00000520417 IGHV2-26A0A0B4J1V2 119 aa1.28□□□□□ -2.2
SKP1-207ENST00000520417 A0A1B0GTI1 187 aa1.28□□□□□ -2.2
SKP1-207ENST00000520417 TCF21O43680 179 aa1.28□□□□□ -2.2
SKP1-207ENST00000520417 PDCD6O75340 191 aa1.28□□□□□ -2.2
SKP1-207ENST00000520417 ZMPSTE24O75844 475 aa1.28□□□□□ -2.2
SKP1-207ENST00000520417 ARL14EPLP0DKL9 152 aa1.28□□□□□ -2.2
SKP1-207ENST00000520417 PSKH1P11801 424 aa1.28□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms