RNA–Protein interactions for RNA: ENST00000520234.1

HMGB1P41-201, Transcript of high mobility group box 1 pseudogene 41, humanhuman

BASIC

Gene HMGB1P41, Length 440 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P41-201ENST00000520234 LIM2P55344 173 aa2.4□□□□□ -2.03
HMGB1P41-201ENST00000520234 RAB2AP61019 212 aa2.4□□□□□ -2.03
HMGB1P41-201ENST00000520234 RPS11P62280 158 aaKnown RBP eCLIP2.4□□□□□ -2.03
HMGB1P41-201ENST00000520234 PJVKQ0ZLH3 352 aa2.4□□□□□ -2.03
HMGB1P41-201ENST00000520234 SNTB2Q13425 540 aaKnown RBP2.4□□□□□ -2.03
HMGB1P41-201ENST00000520234 MADCAM1Q13477 382 aa2.4□□□□□ -2.03
HMGB1P41-201ENST00000520234 OR2F1Q13607 317 aa2.4□□□□□ -2.03
HMGB1P41-201ENST00000520234 C1DQ13901 141 aaKnown RBP2.4□□□□□ -2.03
HMGB1P41-201ENST00000520234 NUMA1Q14980 2115 aa2.4□□□□□ -2.03
HMGB1P41-201ENST00000520234 SURF2Q15527 256 aaPredicted RBP2.4□□□□□ -2.03
HMGB1P41-201ENST00000520234 OR8G1Q15617 311 aa2.4□□□□□ -2.03
HMGB1P41-201ENST00000520234 CEBPEQ15744 281 aa2.4□□□□□ -2.03
HMGB1P41-201ENST00000520234 NDUFA9Q16795 377 aa2.4□□□□□ -2.03
HMGB1P41-201ENST00000520234 SLC5A12Q1EHB4 618 aa2.4□□□□□ -2.03
HMGB1P41-201ENST00000520234 SLC25A35Q3KQZ1 300 aa2.4□□□□□ -2.03
HMGB1P41-201ENST00000520234 LINC00303Q3SY05 128 aa2.4□□□□□ -2.03
HMGB1P41-201ENST00000520234 RNASE10Q5GAN6 216 aaKnown RBP2.4□□□□□ -2.03
HMGB1P41-201ENST00000520234 COA6Q5JTJ3 125 aaKnown RBP2.4□□□□□ -2.03
HMGB1P41-201ENST00000520234 LIPNQ5VXI9 398 aa2.4□□□□□ -2.03
HMGB1P41-201ENST00000520234 TMEM215Q68D42 235 aa2.4□□□□□ -2.03
HMGB1P41-201ENST00000520234 CYB5R2Q6BCY4 276 aa2.4□□□□□ -2.03
HMGB1P41-201ENST00000520234 DMKNQ6E0U4 476 aaPredicted RBP2.4□□□□□ -2.03
HMGB1P41-201ENST00000520234 RAB12Q6IQ22 244 aa2.4□□□□□ -2.03
HMGB1P41-201ENST00000520234 ACSM5Q6NUN0 579 aa2.4□□□□□ -2.03
HMGB1P41-201ENST00000520234 C1orf94Q6P1W5 598 aa2.4□□□□□ -2.03
HMGB1P41-201ENST00000520234 SFXN4Q6P4A7 337 aa2.4□□□□□ -2.03
HMGB1P41-201ENST00000520234 FAM199XQ6PEV8 388 aaPredicted RBP2.4□□□□□ -2.03
HMGB1P41-201ENST00000520234 TMEM220Q6QAJ8 160 aa2.4□□□□□ -2.03
HMGB1P41-201ENST00000520234 ZNF322Q6U7Q0 402 aaPredicted RBP2.4□□□□□ -2.03
HMGB1P41-201ENST00000520234 LRRN1Q6UXK5 716 aa2.4□□□□□ -2.03
HMGB1P41-201ENST00000520234 UNQ9370/PRO34162Q6UXP9 181 aa2.4□□□□□ -2.03
HMGB1P41-201ENST00000520234 HEPN1Q6WQI6 88 aa2.4□□□□□ -2.03
HMGB1P41-201ENST00000520234 IL34Q6ZMJ4 242 aa2.4□□□□□ -2.03
HMGB1P41-201ENST00000520234 ABHD13Q7L211 337 aa2.4□□□□□ -2.03
HMGB1P41-201ENST00000520234 COMMD6Q7Z4G1 85 aa2.4□□□□□ -2.03
HMGB1P41-201ENST00000520234 DCXRQ7Z4W1 244 aa2.4□□□□□ -2.03
HMGB1P41-201ENST00000520234 DPPA2Q7Z7J5 298 aa2.4□□□□□ -2.03
HMGB1P41-201ENST00000520234 GKN2Q86XP6 184 aa2.4□□□□□ -2.03
HMGB1P41-201ENST00000520234 TMEM25Q86YD3 366 aa2.4□□□□□ -2.03
HMGB1P41-201ENST00000520234 GID4Q8IVV7 300 aa2.4□□□□□ -2.03
HMGB1P41-201ENST00000520234 C11orf53Q8IXP5 236 aa2.4□□□□□ -2.03
HMGB1P41-201ENST00000520234 C9orf40Q8IXQ3 194 aa2.4□□□□□ -2.03
HMGB1P41-201ENST00000520234 CLECL1Q8IZS7 167 aa2.4□□□□□ -2.03
HMGB1P41-201ENST00000520234 CMTM8Q8IZV2 173 aa2.4□□□□□ -2.03
HMGB1P41-201ENST00000520234 HIST3H2BBQ8N257 126 aa2.4□□□□□ -2.03
HMGB1P41-201ENST00000520234 MRPL43Q8N983 215 aaKnown RBP2.4□□□□□ -2.03
HMGB1P41-201ENST00000520234 MORN4Q8NDC4 146 aa2.4□□□□□ -2.03
HMGB1P41-201ENST00000520234 OR4D9Q8NGE8 314 aa2.4□□□□□ -2.03
HMGB1P41-201ENST00000520234 OR13C8Q8NGS7 320 aa2.4□□□□□ -2.03
HMGB1P41-201ENST00000520234 OR9A2Q8NGT5 310 aa2.4□□□□□ -2.03
HMGB1P41-201ENST00000520234 TRMT10AQ8TBZ6 339 aaKnown RBP2.4□□□□□ -2.03
HMGB1P41-201ENST00000520234 ACOT11Q8WXI4 607 aaPredicted RBP2.4□□□□□ -2.03
HMGB1P41-201ENST00000520234 NEIL2Q969S2 332 aa2.4□□□□□ -2.03
HMGB1P41-201ENST00000520234 TMEM159Q96B96 161 aa2.4□□□□□ -2.03
HMGB1P41-201ENST00000520234 PPCDCQ96CD2 204 aa2.4□□□□□ -2.03
HMGB1P41-201ENST00000520234 GALNT14Q96FL9 552 aa2.4□□□□□ -2.03
HMGB1P41-201ENST00000520234 COX14Q96I36 57 aa2.4□□□□□ -2.03
HMGB1P41-201ENST00000520234 FAM210BQ96KR6 192 aa2.4□□□□□ -2.03
HMGB1P41-201ENST00000520234 PGLYRP3Q96LB9 341 aa2.4□□□□□ -2.03
HMGB1P41-201ENST00000520234 ZNF75AQ96N20 296 aa2.4□□□□□ -2.03
HMGB1P41-201ENST00000520234 TGM7Q96PF1 710 aa2.4□□□□□ -2.03
HMGB1P41-201ENST00000520234 IL4I1Q96RQ9 567 aa2.4□□□□□ -2.03
HMGB1P41-201ENST00000520234 ZNF607Q96SK3 696 aa2.4□□□□□ -2.03
HMGB1P41-201ENST00000520234 GPA33Q99795 319 aa2.4□□□□□ -2.03
HMGB1P41-201ENST00000520234 SLC35A5Q9BS91 424 aa2.4□□□□□ -2.03
HMGB1P41-201ENST00000520234 TMEM208Q9BTX3 173 aa2.4□□□□□ -2.03
HMGB1P41-201ENST00000520234 RIOK2Q9BVS4 552 aaKnown RBP2.4□□□□□ -2.03
HMGB1P41-201ENST00000520234 SNHG12Q9BXW3 62 aa2.4□□□□□ -2.03
HMGB1P41-201ENST00000520234 HDHD2Q9H0R4 259 aa2.4□□□□□ -2.03
HMGB1P41-201ENST00000520234 OR52A5Q9H2C5 316 aa2.4□□□□□ -2.03
HMGB1P41-201ENST00000520234 PTGES2Q9H7Z7 377 aa2.4□□□□□ -2.03
HMGB1P41-201ENST00000520234 TMEM27Q9HBJ8 222 aa2.4□□□□□ -2.03
HMGB1P41-201ENST00000520234 MMP26Q9NRE1 261 aa2.4□□□□□ -2.03
HMGB1P41-201ENST00000520234 GLRX2Q9NS18 164 aa2.4□□□□□ -2.03
HMGB1P41-201ENST00000520234 DUX4Q9UBX2 424 aa2.4□□□□□ -2.03
HMGB1P41-201ENST00000520234 TBX21Q9UL17 535 aa2.4□□□□□ -2.03
HMGB1P41-201ENST00000520234 ANGPT4Q9Y264 503 aa2.4□□□□□ -2.03
HMGB1P41-201ENST00000520234 RASD1Q9Y272 281 aa2.4□□□□□ -2.03
HMGB1P41-201ENST00000520234 GSTK1Q9Y2Q3 226 aa2.4□□□□□ -2.03
HMGB1P41-201ENST00000520234 STARD10Q9Y365 291 aa2.4□□□□□ -2.03
HMGB1P41-201ENST00000520234 EXOSC1Q9Y3B2 195 aaKnown RBP2.4□□□□□ -2.03
HMGB1P41-201ENST00000520234 DOCK9Q9BZ29 2069 aa2.4□□□□□ -2.03
HMGB1P41-201ENST00000520234 A0A0U1RQV5 110 aa2.39□□□□□ -2.03
HMGB1P41-201ENST00000520234 TMEM269A0A1B0GVZ9 245 aa2.39□□□□□ -2.03
HMGB1P41-201ENST00000520234 A0A1B0GW64 132 aa2.39□□□□□ -2.03
HMGB1P41-201ENST00000520234 GNG14A0A1W2PPG7 69 aa2.39□□□□□ -2.03
HMGB1P41-201ENST00000520234 TMEM72A0PK05 275 aa2.39□□□□□ -2.03
HMGB1P41-201ENST00000520234 C7orf77A4D0Y5 90 aa2.39□□□□□ -2.03
HMGB1P41-201ENST00000520234 METTL21EPA6NDL7 271 aa2.39□□□□□ -2.03
HMGB1P41-201ENST00000520234 A6NIN4 97 aa2.39□□□□□ -2.03
HMGB1P41-201ENST00000520234 SEC14L6B5MCN3 397 aa2.39□□□□□ -2.03
HMGB1P41-201ENST00000520234 TRDCB7Z8K6 153 aa2.39□□□□□ -2.03
HMGB1P41-201ENST00000520234 C9J4A7 227 aa2.39□□□□□ -2.03
HMGB1P41-201ENST00000520234 LRRN3E7EW58 273 aa2.39□□□□□ -2.03
HMGB1P41-201ENST00000520234 RNASEK-C17orf49H0YIS7 233 aa2.39□□□□□ -2.03
HMGB1P41-201ENST00000520234 H3BMH7 237 aa2.39□□□□□ -2.03
HMGB1P41-201ENST00000520234 GABARAPH6UMI1 98 aa2.39□□□□□ -2.03
HMGB1P41-201ENST00000520234 K7EP13 123 aa2.39□□□□□ -2.03
HMGB1P41-201ENST00000520234 HMGN4O00479 90 aa2.39□□□□□ -2.03
HMGB1P41-201ENST00000520234 TNFSF11O14788 317 aa2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms