RNA–Protein interactions for RNA: ENST00000519848.1

PABPC1-213, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 676 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-213ENST00000519848 ERP29P30040 261 aaKnown RBP6.84□□□□□ -1.31
PABPC1-213ENST00000519848 VDAC2P45880 294 aaPredicted RBP6.84□□□□□ -1.31
PABPC1-213ENST00000519848 SOX2P48431 317 aa6.84□□□□□ -1.31
PABPC1-213ENST00000519848 ETV1P50549 477 aa6.84□□□□□ -1.31
PABPC1-213ENST00000519848 ATP1B3P54709 279 aa6.84□□□□□ -1.31
PABPC1-213ENST00000519848 LGALS4P56470 323 aa6.84□□□□□ -1.31
PABPC1-213ENST00000519848 BDH1Q02338 343 aa6.84□□□□□ -1.31
PABPC1-213ENST00000519848 SCN1BQ07699 218 aa6.84□□□□□ -1.31
PABPC1-213ENST00000519848 ZNF124Q15973 351 aa6.84□□□□□ -1.31
PABPC1-213ENST00000519848 SPIN3Q5JUX0 258 aa6.84□□□□□ -1.31
PABPC1-213ENST00000519848 MINOS1Q5TGZ0 78 aa6.84□□□□□ -1.31
PABPC1-213ENST00000519848 LCNL1Q6ZST4 164 aa6.84□□□□□ -1.31
PABPC1-213ENST00000519848 LHFPL2Q6ZUX7 228 aa6.84□□□□□ -1.31
PABPC1-213ENST00000519848 ZNF485Q8NCK3 441 aa6.84□□□□□ -1.31
PABPC1-213ENST00000519848 OR5AU1Q8NGC0 362 aa6.84□□□□□ -1.31
PABPC1-213ENST00000519848 NOL4LQ96MY1 436 aaPredicted RBP6.84□□□□□ -1.31
PABPC1-213ENST00000519848 DUX3Q96PT4 197 aa6.84□□□□□ -1.31
PABPC1-213ENST00000519848 SLC25A33Q9BSK2 321 aa6.84□□□□□ -1.31
PABPC1-213ENST00000519848 TEX12Q9BXU0 123 aa6.84□□□□□ -1.31
PABPC1-213ENST00000519848 EXOSC4Q9NPD3 245 aaKnown RBP6.84□□□□□ -1.31
PABPC1-213ENST00000519848 LINC00527Q9UJ94 153 aa6.84□□□□□ -1.31
PABPC1-213ENST00000519848 UBE2J1Q9Y385 318 aaPredicted RBP6.84□□□□□ -1.31
PABPC1-213ENST00000519848 MINOS1-NBL1R4GNA1 71 aa6.84□□□□□ -1.31
PABPC1-213ENST00000519848 TRAV8-7A0A075B6U6 113 aa6.83□□□□□ -1.32
PABPC1-213ENST00000519848 FAM90A18PA6NE21 464 aa6.83□□□□□ -1.32
PABPC1-213ENST00000519848 FAM90A16PA6NEW6 464 aa6.83□□□□□ -1.32
PABPC1-213ENST00000519848 FAM90A20PA6NIJ5 464 aa6.83□□□□□ -1.32
PABPC1-213ENST00000519848 DBX1A6NMT0 343 aa6.83□□□□□ -1.32
PABPC1-213ENST00000519848 FAM90A9PA6NNJ1 464 aa6.83□□□□□ -1.32
PABPC1-213ENST00000519848 FAM90A12PA8MX19 464 aa6.83□□□□□ -1.32
PABPC1-213ENST00000519848 FAM90A5PA8MXJ8 464 aa6.83□□□□□ -1.32
PABPC1-213ENST00000519848 ZNF736B4DX44 427 aaPredicted RBP6.83□□□□□ -1.32
PABPC1-213ENST00000519848 H0YJX3 145 aa6.83□□□□□ -1.32
PABPC1-213ENST00000519848 BUB1B-PAK6H3BSN5 160 aa6.83□□□□□ -1.32
PABPC1-213ENST00000519848 PIN1P1O15428 100 aa6.83□□□□□ -1.32
PABPC1-213ENST00000519848 CDRT1O95170 752 aa6.83□□□□□ -1.32
PABPC1-213ENST00000519848 SNRNP70P08621 437 aaKnown RBP6.83□□□□□ -1.32
PABPC1-213ENST00000519848 FAM90A15PP0C7V4 464 aa6.83□□□□□ -1.32
PABPC1-213ENST00000519848 FAM90A13PP0C7W8 464 aa6.83□□□□□ -1.32
PABPC1-213ENST00000519848 FAM90A14PP0C7W9 464 aa6.83□□□□□ -1.32
PABPC1-213ENST00000519848 FAM90A24PP0C7X0 464 aa6.83□□□□□ -1.32
PABPC1-213ENST00000519848 ZNF44P15621 663 aa6.83□□□□□ -1.32
PABPC1-213ENST00000519848 ZNF20P17024 532 aa6.83□□□□□ -1.32
PABPC1-213ENST00000519848 HTR1DP28221 377 aa6.83□□□□□ -1.32
PABPC1-213ENST00000519848 HOXD3P31249 432 aaPredicted RBP6.83□□□□□ -1.32
PABPC1-213ENST00000519848 GLP1RP43220 463 aa6.83□□□□□ -1.32
PABPC1-213ENST00000519848 GNG10P50151 68 aa6.83□□□□□ -1.32
PABPC1-213ENST00000519848 ALDH3A2P51648 485 aa6.83□□□□□ -1.32
PABPC1-213ENST00000519848 CCR9P51686 369 aa6.83□□□□□ -1.32
PABPC1-213ENST00000519848 RPS11P62280 158 aaKnown RBP eCLIP6.83□□□□□ -1.32
PABPC1-213ENST00000519848 TMED1Q13445 227 aa6.83□□□□□ -1.32
PABPC1-213ENST00000519848 GALEQ14376 348 aa6.83□□□□□ -1.32
PABPC1-213ENST00000519848 KISS1Q15726 138 aa6.83□□□□□ -1.32
PABPC1-213ENST00000519848 LTC4SQ16873 150 aa6.83□□□□□ -1.32
PABPC1-213ENST00000519848 ZNF691Q5VV52 312 aa6.83□□□□□ -1.32
PABPC1-213ENST00000519848 TMEM244Q5VVB8 128 aa6.83□□□□□ -1.32
PABPC1-213ENST00000519848 FAM220AQ7Z4H9 259 aa6.83□□□□□ -1.32
PABPC1-213ENST00000519848 TRAPPC6BQ86SZ2 158 aa6.83□□□□□ -1.32
PABPC1-213ENST00000519848 ZNF329Q86UD4 541 aa6.83□□□□□ -1.32
PABPC1-213ENST00000519848 PARP16Q8N5Y8 322 aa6.83□□□□□ -1.32
PABPC1-213ENST00000519848 ACBD7Q8N6N7 88 aa6.83□□□□□ -1.32
PABPC1-213ENST00000519848 LINC00482Q8N8I6 264 aa6.83□□□□□ -1.32
PABPC1-213ENST00000519848 ZFP41Q8N8Y5 198 aa6.83□□□□□ -1.32
PABPC1-213ENST00000519848 OR51T1Q8NGJ9 327 aa6.83□□□□□ -1.32
PABPC1-213ENST00000519848 OR56B4Q8NH76 319 aa6.83□□□□□ -1.32
PABPC1-213ENST00000519848 RHOXF1Q8NHV9 184 aa6.83□□□□□ -1.32
PABPC1-213ENST00000519848 RFESDQ8TAC1 157 aa6.83□□□□□ -1.32
PABPC1-213ENST00000519848 CNIH3Q8TBE1 160 aa6.83□□□□□ -1.32
PABPC1-213ENST00000519848 MRAPQ8TCY5 172 aa6.83□□□□□ -1.32
PABPC1-213ENST00000519848 MRGPRDQ8TDS7 321 aa6.83□□□□□ -1.32
PABPC1-213ENST00000519848 SPSB1Q96BD6 273 aa6.83□□□□□ -1.32
PABPC1-213ENST00000519848 C10orf35Q96D05 121 aa6.83□□□□□ -1.32
PABPC1-213ENST00000519848 RBM14Q96PK6 669 aaKnown RBP6.83□□□□□ -1.32
PABPC1-213ENST00000519848 PRSS22Q9GZN4 317 aa6.83□□□□□ -1.32
PABPC1-213ENST00000519848 ZCCHC4Q9H5U6 513 aa6.83□□□□□ -1.32
PABPC1-213ENST00000519848 CALYQ9NYX4 217 aa6.83□□□□□ -1.32
PABPC1-213ENST00000519848 DPM3Q9P2X0 92 aa6.83□□□□□ -1.32
PABPC1-213ENST00000519848 CLEC2DQ9UHP7 191 aa6.83□□□□□ -1.32
PABPC1-213ENST00000519848 IGHV3-72A0A0B4J1Y9 119 aa6.82□□□□□ -1.32
PABPC1-213ENST00000519848 NPIPB11E5RHQ5 1161 aa6.82□□□□□ -1.32
PABPC1-213ENST00000519848 C15orf65H3BRN8 121 aa6.82□□□□□ -1.32
PABPC1-213ENST00000519848 SULT1B1O43704 296 aa6.82□□□□□ -1.32
PABPC1-213ENST00000519848 OR2F2O95006 317 aa6.82□□□□□ -1.32
PABPC1-213ENST00000519848 FCGR1AP12314 374 aa6.82□□□□□ -1.32
PABPC1-213ENST00000519848 PRKACBP22694 351 aa6.82□□□□□ -1.32
PABPC1-213ENST00000519848 REG1BP48304 166 aa6.82□□□□□ -1.32
PABPC1-213ENST00000519848 CDC42P60953 191 aa6.82□□□□□ -1.32
PABPC1-213ENST00000519848 RBM39Q14498 530 aaKnown RBP6.82□□□□□ -1.32
PABPC1-213ENST00000519848 INSL4Q14641 139 aa6.82□□□□□ -1.32
PABPC1-213ENST00000519848 KRBOX4Q5JUW0 171 aa6.82□□□□□ -1.32
PABPC1-213ENST00000519848 C11orf88Q6PI97 169 aa6.82□□□□□ -1.32
PABPC1-213ENST00000519848 ASCL4Q6XD76 172 aa6.82□□□□□ -1.32
PABPC1-213ENST00000519848 LYPD6Q86Y78 171 aa6.82□□□□□ -1.32
PABPC1-213ENST00000519848 Q8IYB0 196 aa6.82□□□□□ -1.32
PABPC1-213ENST00000519848 SAXO1Q8IYX7 474 aa6.82□□□□□ -1.32
PABPC1-213ENST00000519848 SYS1Q8N2H4 156 aa6.82□□□□□ -1.32
PABPC1-213ENST00000519848 DRAM1Q8N682 238 aa6.82□□□□□ -1.32
PABPC1-213ENST00000519848 C5orf56Q8N8D9 126 aa6.82□□□□□ -1.32
PABPC1-213ENST00000519848 WFDC9Q8NEX5 89 aa6.82□□□□□ -1.32
PABPC1-213ENST00000519848 Q8NFD4 153 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms