RNA–Protein interactions for RNA: ENST00000519767.5

VEGFA-220, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 970 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-220ENST00000519767 IL13RA2Q14627 380 aa20.28■□□□□ 0.84
VEGFA-220ENST00000519767 ATXN7L3Q14CW9 347 aaPredicted RBP20.28■□□□□ 0.84
VEGFA-220ENST00000519767 RSU1Q15404 277 aa20.28■□□□□ 0.84
VEGFA-220ENST00000519767 HLA-DRB5Q30154 266 aa20.28■□□□□ 0.84
VEGFA-220ENST00000519767 BEAN1Q3B7T3 259 aa20.28■□□□□ 0.84
VEGFA-220ENST00000519767 SAMD5Q5TGI4 173 aa20.28■□□□□ 0.84
VEGFA-220ENST00000519767 ASCL4Q6XD76 172 aa20.28■□□□□ 0.84
VEGFA-220ENST00000519767 TMPRSS11AQ6ZMR5 421 aa20.28■□□□□ 0.84
VEGFA-220ENST00000519767 LYG1Q8N1E2 194 aa20.28■□□□□ 0.84
VEGFA-220ENST00000519767 CNIH3Q8TBE1 160 aa20.28■□□□□ 0.84
VEGFA-220ENST00000519767 TNFAIP8L1Q8WVP5 186 aa20.28■□□□□ 0.84
VEGFA-220ENST00000519767 APH1BQ8WW43 257 aa20.28■□□□□ 0.84
VEGFA-220ENST00000519767 NR1H4Q96RI1 486 aaPredicted RBP20.28■□□□□ 0.84
VEGFA-220ENST00000519767 CITED2Q99967 270 aaPredicted RBP20.28■□□□□ 0.84
VEGFA-220ENST00000519767 ZNF286AQ9HBT8 521 aa20.28■□□□□ 0.84
VEGFA-220ENST00000519767 ING3Q9NXR8 418 aa20.28■□□□□ 0.84
VEGFA-220ENST00000519767 PRKDCP78527 4128 aaKnown RBP20.27■□□□□ 0.84
VEGFA-220ENST00000519767 IRGMA1A4Y4 181 aa20.27■□□□□ 0.84
VEGFA-220ENST00000519767 LY6LH3BQJ8 138 aa20.27■□□□□ 0.84
VEGFA-220ENST00000519767 GDNFP39905 211 aa20.27■□□□□ 0.84
VEGFA-220ENST00000519767 MNDAP41218 407 aa20.27■□□□□ 0.84
VEGFA-220ENST00000519767 KCNJ3P48549 501 aa20.27■□□□□ 0.84
VEGFA-220ENST00000519767 GTF2A1P52655 376 aaPredicted RBP20.27■□□□□ 0.84
VEGFA-220ENST00000519767 C17orf58Q2M2W7 97 aa20.27■□□□□ 0.84
VEGFA-220ENST00000519767 PAN3Q58A45 887 aaKnown RBP20.27■□□□□ 0.84
VEGFA-220ENST00000519767 R3HDM4Q96D70 268 aa20.27■□□□□ 0.84
VEGFA-220ENST00000519767 RBM14Q96PK6 669 aaKnown RBP20.27■□□□□ 0.84
VEGFA-220ENST00000519767 LINC00574Q9H8X3 128 aa20.27■□□□□ 0.84
VEGFA-220ENST00000519767 PCDHB16Q9NRJ7 776 aa20.27■□□□□ 0.84
VEGFA-220ENST00000519767 SMPD3Q9NY59 655 aaPredicted RBP20.27■□□□□ 0.84
VEGFA-220ENST00000519767 MEIKINA0A087WXM9 373 aa20.26■□□□□ 0.83
VEGFA-220ENST00000519767 OR2F2O95006 317 aa20.26■□□□□ 0.83
VEGFA-220ENST00000519767 BAG2O95816 211 aa20.26■□□□□ 0.83
VEGFA-220ENST00000519767 PAX5Q02548 391 aa20.26■□□□□ 0.83
VEGFA-220ENST00000519767 TPTE2P1Q5T6R2 138 aa20.26■□□□□ 0.83
VEGFA-220ENST00000519767 CENPVQ7Z7K6 275 aaPredicted RBP20.26■□□□□ 0.83
VEGFA-220ENST00000519767 OR5AU1Q8NGC0 362 aa20.26■□□□□ 0.83
VEGFA-220ENST00000519767 OR9G1Q8NH87 305 aa20.26■□□□□ 0.83
VEGFA-220ENST00000519767 MMP28Q9H239 520 aa20.26■□□□□ 0.83
VEGFA-220ENST00000519767 PPIL3Q9H2H8 161 aaKnown RBP20.26■□□□□ 0.83
VEGFA-220ENST00000519767 TRAV24A0A0B4J272 114 aa20.25■□□□□ 0.83
VEGFA-220ENST00000519767 FAM172BPA6NC97 362 aa20.25■□□□□ 0.83
VEGFA-220ENST00000519767 M0QZK8 103 aa20.25■□□□□ 0.83
VEGFA-220ENST00000519767 GABRPO00591 440 aa20.25■□□□□ 0.83
VEGFA-220ENST00000519767 WBP4O75554 376 aaKnown RBP20.25■□□□□ 0.83
VEGFA-220ENST00000519767 CD24P25063 80 aa20.25■□□□□ 0.83
VEGFA-220ENST00000519767 NFYBP25208 207 aa20.25■□□□□ 0.83
VEGFA-220ENST00000519767 SOX2P48431 317 aa20.25■□□□□ 0.83
VEGFA-220ENST00000519767 CD83Q01151 205 aa20.25■□□□□ 0.83
VEGFA-220ENST00000519767 SLC16A12Q6ZSM3 486 aa20.25■□□□□ 0.83
VEGFA-220ENST00000519767 REC114Q7Z4M0 266 aa20.25■□□□□ 0.83
VEGFA-220ENST00000519767 KIRREL1Q96J84 757 aa20.25■□□□□ 0.83
VEGFA-220ENST00000519767 SLC25A33Q9BSK2 321 aa20.25■□□□□ 0.83
VEGFA-220ENST00000519767 TMEM138Q9NPI0 162 aa20.25■□□□□ 0.83
VEGFA-220ENST00000519767 BABAM2Q9NXR7 383 aa20.25■□□□□ 0.83
VEGFA-220ENST00000519767 AMMECR1Q9Y4X0 333 aaPredicted RBP20.25■□□□□ 0.83
VEGFA-220ENST00000519767 ADARB2-AS1A8MUL3 147 aa20.24■□□□□ 0.83
VEGFA-220ENST00000519767 FAM106CPP0CH98 169 aa20.24■□□□□ 0.83
VEGFA-220ENST00000519767 OR3A4PP47883 348 aa20.24■□□□□ 0.83
VEGFA-220ENST00000519767 ETV1P50549 477 aa20.24■□□□□ 0.83
VEGFA-220ENST00000519767 RBM39Q14498 530 aaKnown RBP20.24■□□□□ 0.83
VEGFA-220ENST00000519767 ZSCAN26Q16670 478 aa20.24■□□□□ 0.83
VEGFA-220ENST00000519767 THNSL2Q86YJ6 484 aa20.24■□□□□ 0.83
VEGFA-220ENST00000519767 OR10A7Q8NGE5 316 aa20.24■□□□□ 0.83
VEGFA-220ENST00000519767 OR51A2Q8NGJ7 313 aa20.24■□□□□ 0.83
VEGFA-220ENST00000519767 RGP1Q92546 391 aaPredicted RBP20.24■□□□□ 0.83
VEGFA-220ENST00000519767 TAS2R4Q9NYW5 299 aa20.24■□□□□ 0.83
VEGFA-220ENST00000519767 CALYQ9NYX4 217 aa20.24■□□□□ 0.83
VEGFA-220ENST00000519767 KIF25Q9UIL4 384 aa20.24■□□□□ 0.83
VEGFA-220ENST00000519767 GLP1RP43220 463 aa20.23■□□□□ 0.83
VEGFA-220ENST00000519767 PPP3R1P63098 170 aa20.23■□□□□ 0.83
VEGFA-220ENST00000519767 SMN1Q16637 294 aaKnown RBP20.23■□□□□ 0.83
VEGFA-220ENST00000519767 TMEM106AQ96A25 262 aa20.23■□□□□ 0.83
VEGFA-220ENST00000519767 FAM192AQ9GZU8 254 aa20.23■□□□□ 0.83
VEGFA-220ENST00000519767 METTL9Q9H1A3 318 aa20.23■□□□□ 0.83
VEGFA-220ENST00000519767 IFT22Q9H7X7 185 aa20.23■□□□□ 0.83
VEGFA-220ENST00000519767 PAK1IP1Q9NWT1 392 aaPredicted RBP20.23■□□□□ 0.83
VEGFA-220ENST00000519767 IDI2-AS1Q9NZ38 188 aa20.23■□□□□ 0.83
VEGFA-220ENST00000519767 ZNF281Q9Y2X9 895 aa20.23■□□□□ 0.83
VEGFA-220ENST00000519767 PLXNB1O43157 2135 aa20.23■□□□□ 0.83
VEGFA-220ENST00000519767 HSPB6O14558 160 aa20.22■□□□□ 0.83
VEGFA-220ENST00000519767 OGG1O15527 345 aa20.22■□□□□ 0.83
VEGFA-220ENST00000519767 HTR3BO95264 441 aa20.22■□□□□ 0.83
VEGFA-220ENST00000519767 MYL12AP19105 171 aa20.22■□□□□ 0.83
VEGFA-220ENST00000519767 TMEM95Q3KNT9 176 aa20.22■□□□□ 0.83
VEGFA-220ENST00000519767 ABCA11PQ4W5N1 156 aa20.22■□□□□ 0.83
VEGFA-220ENST00000519767 NHLRC3Q5JS37 347 aa20.22■□□□□ 0.83
VEGFA-220ENST00000519767 OR13A1Q8NGR1 328 aa20.22■□□□□ 0.83
VEGFA-220ENST00000519767 RPEQ96AT9 228 aa20.22■□□□□ 0.83
VEGFA-220ENST00000519767 S100A13Q99584 98 aa20.22■□□□□ 0.83
VEGFA-220ENST00000519767 IL36GQ9NZH8 169 aa20.22■□□□□ 0.83
VEGFA-220ENST00000519767 ING4Q9UNL4 249 aa20.22■□□□□ 0.83
VEGFA-220ENST00000519767 DIMT1Q9UNQ2 313 aaKnown RBP20.22■□□□□ 0.83
VEGFA-220ENST00000519767 EXOSC1Q9Y3B2 195 aaKnown RBP20.22■□□□□ 0.83
VEGFA-220ENST00000519767 NPIPB11E5RHQ5 1161 aa20.21■□□□□ 0.83
VEGFA-220ENST00000519767 J3QR06 171 aa20.21■□□□□ 0.83
VEGFA-220ENST00000519767 IL1AP01583 271 aa20.21■□□□□ 0.83
VEGFA-220ENST00000519767 GZMHP20718 246 aa20.21■□□□□ 0.83
VEGFA-220ENST00000519767 ZNF93P35789 620 aaPredicted RBP20.21■□□□□ 0.83
VEGFA-220ENST00000519767 MED21Q13503 144 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms