RNA–Protein interactions for RNA: ENST00000519623.1

CSMD1-205, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 4

Gene CSMD1, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-205ENST00000519623 FAM90A5PA8MXJ8 464 aa9.91□□□□□ -0.82
CSMD1-205ENST00000519623 MPZL2O60487 215 aa9.91□□□□□ -0.82
CSMD1-205ENST00000519623 LPLP06858 475 aa9.91□□□□□ -0.82
CSMD1-205ENST00000519623 FAM90A15PP0C7V4 464 aa9.91□□□□□ -0.82
CSMD1-205ENST00000519623 FAM90A13PP0C7W8 464 aa9.91□□□□□ -0.82
CSMD1-205ENST00000519623 FAM90A14PP0C7W9 464 aa9.91□□□□□ -0.82
CSMD1-205ENST00000519623 FAM90A24PP0C7X0 464 aa9.91□□□□□ -0.82
CSMD1-205ENST00000519623 CEACAM3P40198 252 aa9.91□□□□□ -0.82
CSMD1-205ENST00000519623 GTF2A1P52655 376 aaPredicted RBP9.91□□□□□ -0.82
CSMD1-205ENST00000519623 RAB40BQ12829 278 aa9.91□□□□□ -0.82
CSMD1-205ENST00000519623 MRPL28Q13084 256 aaKnown RBP9.91□□□□□ -0.82
CSMD1-205ENST00000519623 ASCL4Q6XD76 172 aa9.91□□□□□ -0.82
CSMD1-205ENST00000519623 ZNF565Q8N9K5 539 aa9.91□□□□□ -0.82
CSMD1-205ENST00000519623 CNIH3Q8TBE1 160 aa9.91□□□□□ -0.82
CSMD1-205ENST00000519623 RGP1Q92546 391 aaPredicted RBP9.91□□□□□ -0.82
CSMD1-205ENST00000519623 PHF21AQ96BD5 680 aa9.91□□□□□ -0.82
CSMD1-205ENST00000519623 KIRREL1Q96J84 757 aa9.91□□□□□ -0.82
CSMD1-205ENST00000519623 AKR1E2Q96JD6 320 aa9.91□□□□□ -0.82
CSMD1-205ENST00000519623 NR1H4Q96RI1 486 aaPredicted RBP9.91□□□□□ -0.82
CSMD1-205ENST00000519623 FAM118AQ9NWS6 357 aa9.91□□□□□ -0.82
CSMD1-205ENST00000519623 OR6C3Q9NZP0 311 aa9.91□□□□□ -0.82
CSMD1-205ENST00000519623 SH2D7A6NKC9 451 aaPredicted RBP9.9□□□□□ -0.82
CSMD1-205ENST00000519623 OOSP1A8MZH6 123 aa9.9□□□□□ -0.82
CSMD1-205ENST00000519623 H0YJX3 145 aa9.9□□□□□ -0.82
CSMD1-205ENST00000519623 CCDC159P0C7I6 412 aa9.9□□□□□ -0.82
CSMD1-205ENST00000519623 LIMS3P0CW19 117 aa9.9□□□□□ -0.82
CSMD1-205ENST00000519623 LIMS4P0CW20 117 aa9.9□□□□□ -0.82
CSMD1-205ENST00000519623 NFYBP25208 207 aa9.9□□□□□ -0.82
CSMD1-205ENST00000519623 OR3A4PP47883 348 aa9.9□□□□□ -0.82
CSMD1-205ENST00000519623 ARHGDIBP52566 201 aa9.9□□□□□ -0.82
CSMD1-205ENST00000519623 GBX2P52951 348 aaPredicted RBP9.9□□□□□ -0.82
CSMD1-205ENST00000519623 ZSCAN26Q16670 478 aa9.9□□□□□ -0.82
CSMD1-205ENST00000519623 C10orf99Q6UWK7 81 aa9.9□□□□□ -0.82
CSMD1-205ENST00000519623 THNSL2Q86YJ6 484 aa9.9□□□□□ -0.82
CSMD1-205ENST00000519623 OR51A2Q8NGJ7 313 aa9.9□□□□□ -0.82
CSMD1-205ENST00000519623 OR13A1Q8NGR1 328 aa9.9□□□□□ -0.82
CSMD1-205ENST00000519623 OR9G1Q8NH87 305 aa9.9□□□□□ -0.82
CSMD1-205ENST00000519623 APH1BQ8WW43 257 aa9.9□□□□□ -0.82
CSMD1-205ENST00000519623 SGCDQ92629 289 aa9.9□□□□□ -0.82
CSMD1-205ENST00000519623 C9orf16Q9BUW7 83 aa9.9□□□□□ -0.82
CSMD1-205ENST00000519623 BARHL1Q9BZE3 327 aa9.9□□□□□ -0.82
CSMD1-205ENST00000519623 NECAP2Q9NVZ3 263 aa9.9□□□□□ -0.82
CSMD1-205ENST00000519623 KIF25Q9UIL4 384 aa9.9□□□□□ -0.82
CSMD1-205ENST00000519623 DHDHQ9UQ10 334 aa9.9□□□□□ -0.82
CSMD1-205ENST00000519623 RPL36Q9Y3U8 105 aaKnown RBP9.9□□□□□ -0.82
CSMD1-205ENST00000519623 DNAH3Q8TD57 4116 aa9.9□□□□□ -0.83
CSMD1-205ENST00000519623 MEIKINA0A087WXM9 373 aa9.89□□□□□ -0.83
CSMD1-205ENST00000519623 TCRBV4S1A1TA0A5B7 111 aa9.89□□□□□ -0.83
CSMD1-205ENST00000519623 NPIPB11E5RHQ5 1161 aa9.89□□□□□ -0.83
CSMD1-205ENST00000519623 J3QR06 171 aa9.89□□□□□ -0.83
CSMD1-205ENST00000519623 GABRPO00591 440 aa9.89□□□□□ -0.83
CSMD1-205ENST00000519623 HSPB6O14558 160 aa9.89□□□□□ -0.83
CSMD1-205ENST00000519623 IGHV3-7P01780 117 aa9.89□□□□□ -0.83
CSMD1-205ENST00000519623 IGLL1P15814 213 aa9.89□□□□□ -0.83
CSMD1-205ENST00000519623 RAB3AP20336 220 aa9.89□□□□□ -0.83
CSMD1-205ENST00000519623 LOXL3P58215 753 aa9.89□□□□□ -0.83
CSMD1-205ENST00000519623 PAX5Q02548 391 aa9.89□□□□□ -0.83
CSMD1-205ENST00000519623 RBM39Q14498 530 aaKnown RBP9.89□□□□□ -0.83
CSMD1-205ENST00000519623 IL13RA2Q14627 380 aa9.89□□□□□ -0.83
CSMD1-205ENST00000519623 KLHL22Q53GT1 634 aa9.89□□□□□ -0.83
CSMD1-205ENST00000519623 PAN3Q58A45 887 aaKnown RBP9.89□□□□□ -0.83
CSMD1-205ENST00000519623 RSBN1Q5VWQ0 802 aaPredicted RBP9.89□□□□□ -0.83
CSMD1-205ENST00000519623 FOXB2Q5VYV0 432 aa9.89□□□□□ -0.83
CSMD1-205ENST00000519623 LPCAT4Q643R3 524 aa9.89□□□□□ -0.83
CSMD1-205ENST00000519623 XAF1Q6GPH4 301 aa9.89□□□□□ -0.83
CSMD1-205ENST00000519623 CCDC144NLQ6NUI1 221 aa9.89□□□□□ -0.83
CSMD1-205ENST00000519623 CCDC121Q6ZUS5 278 aa9.89□□□□□ -0.83
CSMD1-205ENST00000519623 SATL1Q86VE3 508 aa9.89□□□□□ -0.83
CSMD1-205ENST00000519623 C10orf67Q8IYJ2 551 aa9.89□□□□□ -0.83
CSMD1-205ENST00000519623 OR10K1Q8NGX5 313 aa9.89□□□□□ -0.83
CSMD1-205ENST00000519623 PLPPR1Q8TBJ4 325 aa9.89□□□□□ -0.83
CSMD1-205ENST00000519623 MRAPQ8TCY5 172 aa9.89□□□□□ -0.83
CSMD1-205ENST00000519623 TNFAIP8L1Q8WVP5 186 aa9.89□□□□□ -0.83
CSMD1-205ENST00000519623 TSEN15Q8WW01 171 aaKnown RBP9.89□□□□□ -0.83
CSMD1-205ENST00000519623 CAPSLQ8WWF8 208 aa9.89□□□□□ -0.83
CSMD1-205ENST00000519623 LEAP2Q969E1 77 aa9.89□□□□□ -0.83
CSMD1-205ENST00000519623 MYDGFQ969H8 173 aa9.89□□□□□ -0.83
CSMD1-205ENST00000519623 JAM3Q9BX67 310 aa9.89□□□□□ -0.83
CSMD1-205ENST00000519623 S100A14Q9HCY8 104 aa9.89□□□□□ -0.83
CSMD1-205ENST00000519623 FGF20Q9NP95 211 aaPredicted RBP9.89□□□□□ -0.83
CSMD1-205ENST00000519623 AURKAIP1Q9NWT8 199 aaPredicted RBP9.89□□□□□ -0.83
CSMD1-205ENST00000519623 CALYQ9NYX4 217 aa9.89□□□□□ -0.83
CSMD1-205ENST00000519623 IDI2-AS1Q9NZ38 188 aa9.89□□□□□ -0.83
CSMD1-205ENST00000519623 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.89□□□□□ -0.83
CSMD1-205ENST00000519623 ZNF581Q9P0T4 197 aa9.89□□□□□ -0.83
CSMD1-205ENST00000519623 PSG11Q9UQ72 335 aa9.89□□□□□ -0.83
CSMD1-205ENST00000519623 TSSC4Q9Y5U2 329 aaPredicted RBP9.89□□□□□ -0.83
CSMD1-205ENST00000519623 M0QZK8 103 aa9.88□□□□□ -0.83
CSMD1-205ENST00000519623 PIN1P1O15428 100 aa9.88□□□□□ -0.83
CSMD1-205ENST00000519623 WBP4O75554 376 aaKnown RBP9.88□□□□□ -0.83
CSMD1-205ENST00000519623 FAM106CPP0CH98 169 aa9.88□□□□□ -0.83
CSMD1-205ENST00000519623 CD33P20138 364 aa9.88□□□□□ -0.83
CSMD1-205ENST00000519623 C21orf33P30042 268 aaPredicted RBP9.88□□□□□ -0.83
CSMD1-205ENST00000519623 MNDAP41218 407 aa9.88□□□□□ -0.83
CSMD1-205ENST00000519623 GLP1RP43220 463 aa9.88□□□□□ -0.83
CSMD1-205ENST00000519623 SOX2P48431 317 aa9.88□□□□□ -0.83
CSMD1-205ENST00000519623 DIAPH2-AS1Q14236 149 aa9.88□□□□□ -0.83
CSMD1-205ENST00000519623 SMN1Q16637 294 aaKnown RBP9.88□□□□□ -0.83
CSMD1-205ENST00000519623 PIGYQ3MUY2 71 aa9.88□□□□□ -0.83
CSMD1-205ENST00000519623 RPL22L1Q6P5R6 122 aaKnown RBP9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms