RNA–Protein interactions for RNA: ENST00000518743.1

HMGB1P23-201, Transcript of high mobility group box 1 pseudogene 23, humanhuman

BASIC

Gene HMGB1P23, Length 568 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P23-201ENST00000518743 DEFB108BQ8NET1 73 aa3.38□□□□□ -1.87
HMGB1P23-201ENST00000518743 WFDC9Q8NEX5 89 aa3.38□□□□□ -1.87
HMGB1P23-201ENST00000518743 OR4K2Q8NGD2 314 aa3.38□□□□□ -1.87
HMGB1P23-201ENST00000518743 OR10R2Q8NGX6 335 aa3.38□□□□□ -1.87
HMGB1P23-201ENST00000518743 C7orf33Q8WU49 177 aa3.38□□□□□ -1.87
HMGB1P23-201ENST00000518743 RDH5Q92781 318 aa3.38□□□□□ -1.87
HMGB1P23-201ENST00000518743 RAB1CQ92928 201 aa3.38□□□□□ -1.87
HMGB1P23-201ENST00000518743 FCRL1Q96LA6 429 aa3.38□□□□□ -1.87
HMGB1P23-201ENST00000518743 PRAP1Q96NZ9 151 aa3.38□□□□□ -1.87
HMGB1P23-201ENST00000518743 MCEEQ96PE7 176 aa3.38□□□□□ -1.87
HMGB1P23-201ENST00000518743 P2RX4Q99571 388 aa3.38□□□□□ -1.87
HMGB1P23-201ENST00000518743 OSBPL11Q9BXB4 747 aa3.38□□□□□ -1.87
HMGB1P23-201ENST00000518743 MRPL37Q9BZE1 423 aaKnown RBP3.38□□□□□ -1.87
HMGB1P23-201ENST00000518743 EDA2RQ9HAV5 297 aa3.38□□□□□ -1.87
HMGB1P23-201ENST00000518743 CA10Q9NS85 328 aa3.38□□□□□ -1.87
HMGB1P23-201ENST00000518743 UBAP1Q9NZ09 502 aa3.38□□□□□ -1.87
HMGB1P23-201ENST00000518743 SIGLEC9Q9Y336 463 aa3.38□□□□□ -1.87
HMGB1P23-201ENST00000518743 SLC22A7Q9Y694 548 aa3.38□□□□□ -1.87
HMGB1P23-201ENST00000518743 HMCN2Q8NDA2 5059 aa3.37□□□□□ -1.87
HMGB1P23-201ENST00000518743 DYNC1H1Q14204 4646 aaKnown RBP3.37□□□□□ -1.87
HMGB1P23-201ENST00000518743 FAM231BA6NCW3 169 aa3.37□□□□□ -1.87
HMGB1P23-201ENST00000518743 OR5H1A6NKK0 313 aa3.37□□□□□ -1.87
HMGB1P23-201ENST00000518743 CENPXA8MT69 81 aa3.37□□□□□ -1.87
HMGB1P23-201ENST00000518743 MMP23AO75900 390 aa3.37□□□□□ -1.87
HMGB1P23-201ENST00000518743 FARS2O95363 451 aaKnown RBP3.37□□□□□ -1.87
HMGB1P23-201ENST00000518743 LSM8O95777 96 aaKnown RBP3.37□□□□□ -1.87
HMGB1P23-201ENST00000518743 APOA1P02647 267 aa3.37□□□□□ -1.87
HMGB1P23-201ENST00000518743 ACSM4P0C7M7 580 aa3.37□□□□□ -1.87
HMGB1P23-201ENST00000518743 GKN3PP0CG01 181 aa3.37□□□□□ -1.87
HMGB1P23-201ENST00000518743 PNMA6AP0CW24 399 aaPredicted RBP3.37□□□□□ -1.87
HMGB1P23-201ENST00000518743 OR12D1P0DN82 309 aa3.37□□□□□ -1.87
HMGB1P23-201ENST00000518743 ZNF17P17021 662 aa3.37□□□□□ -1.87
HMGB1P23-201ENST00000518743 COL8A2P25067 703 aa3.37□□□□□ -1.87
HMGB1P23-201ENST00000518743 F2RP25116 425 aa3.37□□□□□ -1.87
HMGB1P23-201ENST00000518743 TMEM33P57088 247 aa3.37□□□□□ -1.87
HMGB1P23-201ENST00000518743 RAB8AP61006 207 aa3.37□□□□□ -1.87
HMGB1P23-201ENST00000518743 ACTA2P62736 377 aa3.37□□□□□ -1.87
HMGB1P23-201ENST00000518743 ACTG2P63267 376 aa3.37□□□□□ -1.87
HMGB1P23-201ENST00000518743 ACTC1P68032 377 aa3.37□□□□□ -1.87
HMGB1P23-201ENST00000518743 ACTA1P68133 377 aa3.37□□□□□ -1.87
HMGB1P23-201ENST00000518743 PRDX1Q06830 199 aaKnown RBP3.37□□□□□ -1.87
HMGB1P23-201ENST00000518743 TMED2Q15363 201 aa3.37□□□□□ -1.87
HMGB1P23-201ENST00000518743 SLC1A5Q15758 541 aa3.37□□□□□ -1.87
HMGB1P23-201ENST00000518743 FAM83EQ2M2I3 478 aa3.37□□□□□ -1.87
HMGB1P23-201ENST00000518743 CCSMST1Q4G0I0 132 aa3.37□□□□□ -1.87
HMGB1P23-201ENST00000518743 SOHLH1Q5JUK2 328 aa3.37□□□□□ -1.87
HMGB1P23-201ENST00000518743 CCDC122Q5T0U0 273 aa3.37□□□□□ -1.87
HMGB1P23-201ENST00000518743 THEM4Q5T1C6 240 aa3.37□□□□□ -1.87
HMGB1P23-201ENST00000518743 CCNJQ5T5M9 372 aa3.37□□□□□ -1.87
HMGB1P23-201ENST00000518743 DCUN1D2Q6PH85 259 aa3.37□□□□□ -1.87
HMGB1P23-201ENST00000518743 RNF165Q6ZSG1 346 aa3.37□□□□□ -1.87
HMGB1P23-201ENST00000518743 SNX20Q7Z614 316 aa3.37□□□□□ -1.87
HMGB1P23-201ENST00000518743 NDUFA11Q86Y39 141 aa3.37□□□□□ -1.87
HMGB1P23-201ENST00000518743 OR13C9Q8NGT0 318 aa3.37□□□□□ -1.87
HMGB1P23-201ENST00000518743 OR2G3Q8NGZ4 309 aa3.37□□□□□ -1.87
HMGB1P23-201ENST00000518743 TYMSOSQ8TAI1 123 aa3.37□□□□□ -1.87
HMGB1P23-201ENST00000518743 NUBPLQ8TB37 319 aa3.37□□□□□ -1.87
HMGB1P23-201ENST00000518743 TMEM54Q969K7 222 aa3.37□□□□□ -1.87
HMGB1P23-201ENST00000518743 FOPNLQ96NB1 174 aa3.37□□□□□ -1.87
HMGB1P23-201ENST00000518743 OR5B12Q96R08 314 aa3.37□□□□□ -1.87
HMGB1P23-201ENST00000518743 OR11A1Q9GZK7 315 aa3.37□□□□□ -1.87
HMGB1P23-201ENST00000518743 GAL3ST2Q9H3Q3 398 aa3.37□□□□□ -1.87
HMGB1P23-201ENST00000518743 NUFIP1Q9UHK0 495 aaKnown RBP3.37□□□□□ -1.87
HMGB1P23-201ENST00000518743 ZNF107Q9UII5 783 aaPredicted RBP3.37□□□□□ -1.87
HMGB1P23-201ENST00000518743 RHBDD3Q9Y3P4 386 aa3.37□□□□□ -1.87
HMGB1P23-201ENST00000518743 ARL5AQ9Y689 179 aa3.37□□□□□ -1.87
HMGB1P23-201ENST00000518743 DNAH11Q96DT5 4516 aa3.37□□□□□ -1.87
HMGB1P23-201ENST00000518743 FAM168BA1KXE4 195 aa3.36□□□□□ -1.87
HMGB1P23-201ENST00000518743 H0YHG0 523 aa3.36□□□□□ -1.87
HMGB1P23-201ENST00000518743 KCNK1O00180 336 aa3.36□□□□□ -1.87
HMGB1P23-201ENST00000518743 CCL22O00626 93 aa3.36□□□□□ -1.87
HMGB1P23-201ENST00000518743 MFSD11O43934 449 aa3.36□□□□□ -1.87
HMGB1P23-201ENST00000518743 FKBP6O75344 327 aa3.36□□□□□ -1.87
HMGB1P23-201ENST00000518743 FOXH1O75593 365 aa3.36□□□□□ -1.87
HMGB1P23-201ENST00000518743 HBE1P02100 147 aa3.36□□□□□ -1.87
HMGB1P23-201ENST00000518743 OR56A5P0C7T3 313 aa3.36□□□□□ -1.87
HMGB1P23-201ENST00000518743 SMIM10L1P0DMW3 83 aa3.36□□□□□ -1.87
HMGB1P23-201ENST00000518743 CD28P10747 220 aa3.36□□□□□ -1.87
HMGB1P23-201ENST00000518743 GFAPP14136 432 aa3.36□□□□□ -1.87
HMGB1P23-201ENST00000518743 MGMTP16455 207 aa3.36□□□□□ -1.87
HMGB1P23-201ENST00000518743 COILP38432 576 aaPredicted RBP3.36□□□□□ -1.87
HMGB1P23-201ENST00000518743 SLC1A2P43004 574 aa3.36□□□□□ -1.87
HMGB1P23-201ENST00000518743 RORCP51449 518 aa3.36□□□□□ -1.87
HMGB1P23-201ENST00000518743 PSMD4P55036 377 aaKnown RBP3.36□□□□□ -1.87
HMGB1P23-201ENST00000518743 APOC4P55056 127 aa3.36□□□□□ -1.87
HMGB1P23-201ENST00000518743 GNB2P62879 340 aa3.36□□□□□ -1.87
HMGB1P23-201ENST00000518743 QPRTQ15274 297 aa3.36□□□□□ -1.87
HMGB1P23-201ENST00000518743 LRRC10Q5BKY1 277 aa3.36□□□□□ -1.87
HMGB1P23-201ENST00000518743 SLC25A30Q5SVS4 291 aa3.36□□□□□ -1.87
HMGB1P23-201ENST00000518743 UBE2UQ5VVX9 321 aa3.36□□□□□ -1.87
HMGB1P23-201ENST00000518743 DNAJC24Q6P3W2 148 aa3.36□□□□□ -1.87
HMGB1P23-201ENST00000518743 LINC00336Q6ZUF6 198 aa3.36□□□□□ -1.87
HMGB1P23-201ENST00000518743 MRPL21Q7Z2W9 205 aaKnown RBP3.36□□□□□ -1.87
HMGB1P23-201ENST00000518743 PNKDQ8N490 385 aa3.36□□□□□ -1.87
HMGB1P23-201ENST00000518743 PRELID2Q8N945 189 aa3.36□□□□□ -1.87
HMGB1P23-201ENST00000518743 CCDC54Q8NEL0 328 aa3.36□□□□□ -1.87
HMGB1P23-201ENST00000518743 OR4K17Q8NGC6 315 aa3.36□□□□□ -1.87
HMGB1P23-201ENST00000518743 OR5M1Q8NGP8 315 aa3.36□□□□□ -1.87
HMGB1P23-201ENST00000518743 FANK1Q8TC84 345 aa3.36□□□□□ -1.87
HMGB1P23-201ENST00000518743 LKAAEAR1Q8TD35 194 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms