RNA–Protein interactions for RNA: ENST00000518723.1

TRAPPC9-204, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-204ENST00000518723 PPIL3Q9H2H8 161 aaKnown RBP9.62□□□□□ -0.87
TRAPPC9-204ENST00000518723 NCOR1P1Q9H4R4 102 aa9.62□□□□□ -0.87
TRAPPC9-204ENST00000518723 RHOFQ9HBH0 211 aa9.62□□□□□ -0.87
TRAPPC9-204ENST00000518723 ZNF580Q9UK33 172 aa9.62□□□□□ -0.87
TRAPPC9-204ENST00000518723 PSG11Q9UQ72 335 aa9.62□□□□□ -0.87
TRAPPC9-204ENST00000518723 IGKV1-12A0A0C4DH73 117 aa9.61□□□□□ -0.87
TRAPPC9-204ENST00000518723 NCBP2LA6PVI3 153 aaKnown RBP9.61□□□□□ -0.87
TRAPPC9-204ENST00000518723 H3BSH0 61 aa9.61□□□□□ -0.87
TRAPPC9-204ENST00000518723 SLC33A1O00400 549 aaPredicted RBP9.61□□□□□ -0.87
TRAPPC9-204ENST00000518723 MPZL2O60487 215 aa9.61□□□□□ -0.87
TRAPPC9-204ENST00000518723 RPP14O95059 124 aaKnown RBP9.61□□□□□ -0.87
TRAPPC9-204ENST00000518723 IL1AP01583 271 aa9.61□□□□□ -0.87
TRAPPC9-204ENST00000518723 IGKV1D-12P01611 117 aa9.61□□□□□ -0.87
TRAPPC9-204ENST00000518723 KRT8P05787 483 aa9.61□□□□□ -0.87
TRAPPC9-204ENST00000518723 ZNF44P15621 663 aa9.61□□□□□ -0.87
TRAPPC9-204ENST00000518723 PRKACBP22694 351 aa9.61□□□□□ -0.87
TRAPPC9-204ENST00000518723 VEGFCP49767 419 aa9.61□□□□□ -0.87
TRAPPC9-204ENST00000518723 MNAT1P51948 309 aa9.61□□□□□ -0.87
TRAPPC9-204ENST00000518723 RUNX1Q01196 453 aa9.61□□□□□ -0.87
TRAPPC9-204ENST00000518723 ZNF816Q0VGE8 651 aaPredicted RBP9.61□□□□□ -0.87
TRAPPC9-204ENST00000518723 BNIP1Q12981 228 aa9.61□□□□□ -0.87
TRAPPC9-204ENST00000518723 ATXN7L3Q14CW9 347 aaPredicted RBP9.61□□□□□ -0.87
TRAPPC9-204ENST00000518723 ASPHD1Q5U4P2 390 aa9.61□□□□□ -0.87
TRAPPC9-204ENST00000518723 ADAMTSL5Q6ZMM2 481 aa9.61□□□□□ -0.87
TRAPPC9-204ENST00000518723 LHFPL2Q6ZUX7 228 aa9.61□□□□□ -0.87
TRAPPC9-204ENST00000518723 UTS2BQ765I0 119 aa9.61□□□□□ -0.87
TRAPPC9-204ENST00000518723 ARHGAP24Q8N264 748 aa9.61□□□□□ -0.87
TRAPPC9-204ENST00000518723 ZNF565Q8N9K5 539 aa9.61□□□□□ -0.87
TRAPPC9-204ENST00000518723 OR51T1Q8NGJ9 327 aa9.61□□□□□ -0.87
TRAPPC9-204ENST00000518723 LEAP2Q969E1 77 aa9.61□□□□□ -0.87
TRAPPC9-204ENST00000518723 SPSB1Q96BD6 273 aa9.61□□□□□ -0.87
TRAPPC9-204ENST00000518723 ADI1Q9BV57 179 aa9.61□□□□□ -0.87
TRAPPC9-204ENST00000518723 OSBPL10Q9BXB5 764 aa9.61□□□□□ -0.87
TRAPPC9-204ENST00000518723 ARL8BQ9NVJ2 186 aa9.61□□□□□ -0.87
TRAPPC9-204ENST00000518723 CALYQ9NYX4 217 aa9.61□□□□□ -0.87
TRAPPC9-204ENST00000518723 IDI2-AS1Q9NZ38 188 aa9.61□□□□□ -0.87
TRAPPC9-204ENST00000518723 LOC107986453A0A1B0GWG9 222 aa9.6□□□□□ -0.87
TRAPPC9-204ENST00000518723 NPIPB11E5RHQ5 1161 aa9.6□□□□□ -0.87
TRAPPC9-204ENST00000518723 I3L521 148 aa9.6□□□□□ -0.87
TRAPPC9-204ENST00000518723 HSD17B6O14756 317 aa9.6□□□□□ -0.87
TRAPPC9-204ENST00000518723 PRKYO43930 277 aa9.6□□□□□ -0.87
TRAPPC9-204ENST00000518723 IGHV3-7P01780 117 aa9.6□□□□□ -0.87
TRAPPC9-204ENST00000518723 IGF1P05019 195 aa9.6□□□□□ -0.87
TRAPPC9-204ENST00000518723 OR5H8P0DN80 308 aa9.6□□□□□ -0.87
TRAPPC9-204ENST00000518723 ANXA8P13928 327 aa9.6□□□□□ -0.87
TRAPPC9-204ENST00000518723 ATF1P18846 271 aa9.6□□□□□ -0.87
TRAPPC9-204ENST00000518723 VDAC1P21796 283 aa9.6□□□□□ -0.87
TRAPPC9-204ENST00000518723 GLP1RP43220 463 aa9.6□□□□□ -0.87
TRAPPC9-204ENST00000518723 MS4A2Q01362 244 aa9.6□□□□□ -0.87
TRAPPC9-204ENST00000518723 ZNF616Q08AN1 781 aa9.6□□□□□ -0.87
TRAPPC9-204ENST00000518723 TRIM25Q14258 630 aaKnown RBP9.6□□□□□ -0.87
TRAPPC9-204ENST00000518723 PLECQ15149 4684 aaKnown RBP9.6□□□□□ -0.87
TRAPPC9-204ENST00000518723 AADACL4Q5VUY2 407 aa9.6□□□□□ -0.87
TRAPPC9-204ENST00000518723 SSX6Q7RTT6 188 aa9.6□□□□□ -0.87
TRAPPC9-204ENST00000518723 HS3ST5Q8IZT8 346 aa9.6□□□□□ -0.87
TRAPPC9-204ENST00000518723 FAM71E2Q8N5Q1 922 aa9.6□□□□□ -0.87
TRAPPC9-204ENST00000518723 YIPF7Q8N8F6 280 aa9.6□□□□□ -0.87
TRAPPC9-204ENST00000518723 OR10A7Q8NGE5 316 aa9.6□□□□□ -0.87
TRAPPC9-204ENST00000518723 OR13A1Q8NGR1 328 aa9.6□□□□□ -0.87
TRAPPC9-204ENST00000518723 OR10X1Q8NGY0 326 aa9.6□□□□□ -0.87
TRAPPC9-204ENST00000518723 OR2T10Q8NGZ9 312 aa9.6□□□□□ -0.87
TRAPPC9-204ENST00000518723 ADAT3Q96EY9 351 aaPredicted RBP9.6□□□□□ -0.87
TRAPPC9-204ENST00000518723 UBE2E2Q96LR5 201 aa9.6□□□□□ -0.87
TRAPPC9-204ENST00000518723 ISYNA1Q9NPH2 558 aa9.6□□□□□ -0.87
TRAPPC9-204ENST00000518723 PLSCR3Q9NRY6 295 aa9.6□□□□□ -0.87
TRAPPC9-204ENST00000518723 ING3Q9NXR8 418 aa9.6□□□□□ -0.87
TRAPPC9-204ENST00000518723 IGHV1-3A0A0C4DH29 117 aa9.59□□□□□ -0.87
TRAPPC9-204ENST00000518723 METTL15A6NJ78 407 aa9.59□□□□□ -0.87
TRAPPC9-204ENST00000518723 LDLRAD4O15165 306 aa9.59□□□□□ -0.87
TRAPPC9-204ENST00000518723 SNX3O60493 162 aa9.59□□□□□ -0.87
TRAPPC9-204ENST00000518723 SULT1C4O75897 302 aa9.59□□□□□ -0.87
TRAPPC9-204ENST00000518723 GAPDHP04406 335 aaKnown RBP9.59□□□□□ -0.87
TRAPPC9-204ENST00000518723 UBCP0CG48 685 aaKnown RBP9.59□□□□□ -0.87
TRAPPC9-204ENST00000518723 GP9P14770 177 aa9.59□□□□□ -0.87
TRAPPC9-204ENST00000518723 SPNP16150 400 aa9.59□□□□□ -0.87
TRAPPC9-204ENST00000518723 PRKACGP22612 351 aa9.59□□□□□ -0.87
TRAPPC9-204ENST00000518723 C21orf33P30042 268 aaPredicted RBP9.59□□□□□ -0.87
TRAPPC9-204ENST00000518723 CRISP1P54107 249 aa9.59□□□□□ -0.87
TRAPPC9-204ENST00000518723 PAX5Q02548 391 aa9.59□□□□□ -0.87
TRAPPC9-204ENST00000518723 SCN1BQ07699 218 aa9.59□□□□□ -0.87
TRAPPC9-204ENST00000518723 KIAA0141Q14154 515 aaPredicted RBP9.59□□□□□ -0.87
TRAPPC9-204ENST00000518723 CDK5R1Q15078 307 aa9.59□□□□□ -0.87
TRAPPC9-204ENST00000518723 NXNL2Q5VZ03 156 aa9.59□□□□□ -0.87
TRAPPC9-204ENST00000518723 BCDIN3DQ7Z5W3 292 aaKnown RBP9.59□□□□□ -0.87
TRAPPC9-204ENST00000518723 MOB3BQ86TA1 216 aa9.59□□□□□ -0.87
TRAPPC9-204ENST00000518723 SAXO1Q8IYX7 474 aa9.59□□□□□ -0.87
TRAPPC9-204ENST00000518723 PRSS35Q8N3Z0 413 aa9.59□□□□□ -0.87
TRAPPC9-204ENST00000518723 TMEM104Q8NE00 496 aa9.59□□□□□ -0.87
TRAPPC9-204ENST00000518723 OR8H1Q8NGG4 311 aa9.59□□□□□ -0.87
TRAPPC9-204ENST00000518723 OR1N2Q8NGR9 330 aa9.59□□□□□ -0.87
TRAPPC9-204ENST00000518723 DNAJC9Q8WXX5 260 aa9.59□□□□□ -0.87
TRAPPC9-204ENST00000518723 OPALINQ96PE5 141 aa9.59□□□□□ -0.87
TRAPPC9-204ENST00000518723 CHCHD6Q9BRQ6 235 aa9.59□□□□□ -0.87
TRAPPC9-204ENST00000518723 PRRG3Q9BZD7 231 aa9.59□□□□□ -0.87
TRAPPC9-204ENST00000518723 CHCHD3Q9NX63 227 aaKnown RBP9.59□□□□□ -0.87
TRAPPC9-204ENST00000518723 KIF25Q9UIL4 384 aa9.59□□□□□ -0.87
TRAPPC9-204ENST00000518723 MEIKINA0A087WXM9 373 aa9.58□□□□□ -0.88
TRAPPC9-204ENST00000518723 TRIM64CA6NLI5 447 aa9.58□□□□□ -0.88
TRAPPC9-204ENST00000518723 GNGT2O14610 69 aa9.58□□□□□ -0.88
TRAPPC9-204ENST00000518723 DEGS1O15121 323 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms