RNA–Protein interactions for RNA: ENST00000517838.5

PVT1-206, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 518 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-206ENST00000517838 OR8H1Q8NGG4 311 aa6.28□□□□□ -1.4
PVT1-206ENST00000517838 FGFBP3Q8TAT2 258 aa6.28□□□□□ -1.4
PVT1-206ENST00000517838 APOBEC3DQ96AK3 386 aaPredicted RBP6.28□□□□□ -1.4
PVT1-206ENST00000517838 MED30Q96HR3 178 aa6.28□□□□□ -1.4
PVT1-206ENST00000517838 ARHGAP5-AS1Q96IT6 56 aa6.28□□□□□ -1.4
PVT1-206ENST00000517838 FANCD2OSQ96PS1 177 aa6.28□□□□□ -1.4
PVT1-206ENST00000517838 HIST1H2AAQ96QV6 131 aa6.28□□□□□ -1.4
PVT1-206ENST00000517838 PDCD10Q9BUL8 212 aa6.28□□□□□ -1.4
PVT1-206ENST00000517838 ST6GALNAC5Q9BVH7 336 aa6.28□□□□□ -1.4
PVT1-206ENST00000517838 BPESC1Q9GZL8 116 aa6.28□□□□□ -1.4
PVT1-206ENST00000517838 OR51B6Q9H340 312 aa6.28□□□□□ -1.4
PVT1-206ENST00000517838 CDH20Q9HBT6 801 aa6.28□□□□□ -1.4
PVT1-206ENST00000517838 PCDHB16Q9NRJ7 776 aa6.28□□□□□ -1.4
PVT1-206ENST00000517838 PLEKHJ1Q9NW61 149 aa6.28□□□□□ -1.4
PVT1-206ENST00000517838 ATP23Q9Y6H3 246 aa6.28□□□□□ -1.4
PVT1-206ENST00000517838 FXYD6-FXYD2A0A087WZ82 144 aa6.27□□□□□ -1.41
PVT1-206ENST00000517838 ZNF850A8MQ14 1090 aa6.27□□□□□ -1.41
PVT1-206ENST00000517838 RPL36A-HNRNPH2H7BZ11 118 aa6.27□□□□□ -1.41
PVT1-206ENST00000517838 AKR7A2O43488 359 aa6.27□□□□□ -1.41
PVT1-206ENST00000517838 ZNF780AO75290 641 aaPredicted RBP6.27□□□□□ -1.41
PVT1-206ENST00000517838 HLA-AP01891 365 aaKnown RBP6.27□□□□□ -1.41
PVT1-206ENST00000517838 CD74P04233 296 aa6.27□□□□□ -1.41
PVT1-206ENST00000517838 MMP7P09237 267 aaPredicted RBP6.27□□□□□ -1.41
PVT1-206ENST00000517838 GSTT2P0CG29 244 aa6.27□□□□□ -1.41
PVT1-206ENST00000517838 COX5BP10606 129 aa6.27□□□□□ -1.41
PVT1-206ENST00000517838 CCL2P13500 99 aa6.27□□□□□ -1.41
PVT1-206ENST00000517838 ACKR3P25106 362 aa6.27□□□□□ -1.41
PVT1-206ENST00000517838 MPGP29372 298 aa6.27□□□□□ -1.41
PVT1-206ENST00000517838 FUT6P51993 359 aa6.27□□□□□ -1.41
PVT1-206ENST00000517838 FOXG1P55316 489 aaPredicted RBP6.27□□□□□ -1.41
PVT1-206ENST00000517838 SNU13P55769 128 aaKnown RBP6.27□□□□□ -1.41
PVT1-206ENST00000517838 ZP1P60852 638 aa6.27□□□□□ -1.41
PVT1-206ENST00000517838 UBE2MP61081 183 aaKnown RBP6.27□□□□□ -1.41
PVT1-206ENST00000517838 RAB1AP62820 205 aa6.27□□□□□ -1.41
PVT1-206ENST00000517838 DEFA6Q01524 100 aa6.27□□□□□ -1.41
PVT1-206ENST00000517838 IFITM2Q01629 132 aa6.27□□□□□ -1.41
PVT1-206ENST00000517838 TGFBR3Q03167 851 aa6.27□□□□□ -1.41
PVT1-206ENST00000517838 ZNF92Q03936 586 aa6.27□□□□□ -1.41
PVT1-206ENST00000517838 GABRA6Q16445 453 aa6.27□□□□□ -1.41
PVT1-206ENST00000517838 TBC1D28Q2M2D7 210 aa6.27□□□□□ -1.41
PVT1-206ENST00000517838 RSPO1Q2MKA7 263 aaPredicted RBP6.27□□□□□ -1.41
PVT1-206ENST00000517838 HIKESHIQ53FT3 197 aa6.27□□□□□ -1.41
PVT1-206ENST00000517838 PRR31Q5SQ13 230 aa6.27□□□□□ -1.41
PVT1-206ENST00000517838 FBXW9Q5XUX1 488 aa6.27□□□□□ -1.41
PVT1-206ENST00000517838 PEG10Q86TG7 708 aaKnown RBP6.27□□□□□ -1.41
PVT1-206ENST00000517838 RTN4RL2Q86UN3 420 aa6.27□□□□□ -1.41
PVT1-206ENST00000517838 ZDHHC23Q8IYP9 409 aa6.27□□□□□ -1.41
PVT1-206ENST00000517838 C9orf62Q8N4C0 152 aa6.27□□□□□ -1.41
PVT1-206ENST00000517838 SPICQ8N5J4 248 aa6.27□□□□□ -1.41
PVT1-206ENST00000517838 ZDHHC22Q8N966 263 aa6.27□□□□□ -1.41
PVT1-206ENST00000517838 LINC01356Q8N9X3 169 aa6.27□□□□□ -1.41
PVT1-206ENST00000517838 OR2AK2Q8NG84 335 aa6.27□□□□□ -1.41
PVT1-206ENST00000517838 OR56B2PQ8NGI1 322 aa6.27□□□□□ -1.41
PVT1-206ENST00000517838 OR1K1Q8NGR3 316 aa6.27□□□□□ -1.41
PVT1-206ENST00000517838 CASTOR1Q8WTX7 329 aa6.27□□□□□ -1.41
PVT1-206ENST00000517838 SNAPC3Q92966 411 aa6.27□□□□□ -1.41
PVT1-206ENST00000517838 SCGB3A2Q96PL1 93 aa6.27□□□□□ -1.41
PVT1-206ENST00000517838 GON7Q9BXV9 100 aa6.27□□□□□ -1.41
PVT1-206ENST00000517838 PECRQ9BY49 303 aa6.27□□□□□ -1.41
PVT1-206ENST00000517838 FXYD6Q9H0Q3 95 aa6.27□□□□□ -1.41
PVT1-206ENST00000517838 OPA3Q9H6K4 179 aa6.27□□□□□ -1.41
PVT1-206ENST00000517838 CHMP1AQ9HD42 196 aaPredicted RBP6.27□□□□□ -1.41
PVT1-206ENST00000517838 EHFQ9NZC4 300 aa6.27□□□□□ -1.41
PVT1-206ENST00000517838 COMMD9Q9P000 198 aa6.27□□□□□ -1.41
PVT1-206ENST00000517838 GPR160Q9UJ42 338 aa6.27□□□□□ -1.41
PVT1-206ENST00000517838 MALRD1Q5VYJ5 2156 aa6.27□□□□□ -1.41
PVT1-206ENST00000517838 ANKRD30BLA7E2S9 258 aa6.26□□□□□ -1.41
PVT1-206ENST00000517838 SERPINE3A8MV23 424 aa6.26□□□□□ -1.41
PVT1-206ENST00000517838 FAM25EA8MYX2 175 aa6.26□□□□□ -1.41
PVT1-206ENST00000517838 FAM157AC9JC47 383 aa6.26□□□□□ -1.41
PVT1-206ENST00000517838 ATP6V1G2-DDX39BF2Z307 99 aa6.26□□□□□ -1.41
PVT1-206ENST00000517838 L7N2F9 121 aa6.26□□□□□ -1.41
PVT1-206ENST00000517838 MFNGO00587 321 aa6.26□□□□□ -1.41
PVT1-206ENST00000517838 SSX5O60225 188 aa6.26□□□□□ -1.41
PVT1-206ENST00000517838 NOS1APO75052 506 aaPredicted RBP6.26□□□□□ -1.41
PVT1-206ENST00000517838 SLC22A5O76082 557 aa6.26□□□□□ -1.41
PVT1-206ENST00000517838 SIX6O95475 246 aa6.26□□□□□ -1.41
PVT1-206ENST00000517838 MELTFP08582 738 aa6.26□□□□□ -1.41
PVT1-206ENST00000517838 OR4E1P0C645 316 aa6.26□□□□□ -1.41
PVT1-206ENST00000517838 AKR1C4P17516 323 aa6.26□□□□□ -1.41
PVT1-206ENST00000517838 MECP2P51608 486 aaKnown RBP6.26□□□□□ -1.41
PVT1-206ENST00000517838 GMFBP60983 142 aa6.26□□□□□ -1.41
PVT1-206ENST00000517838 FAM3AP98173 230 aa6.26□□□□□ -1.41
PVT1-206ENST00000517838 PRDX4Q13162 271 aa6.26□□□□□ -1.41
PVT1-206ENST00000517838 KRTAP27-1Q3LI81 207 aa6.26□□□□□ -1.41
PVT1-206ENST00000517838 ATPAF1Q5TC12 328 aaPredicted RBP6.26□□□□□ -1.41
PVT1-206ENST00000517838 ZBTB37Q5TC79 503 aa6.26□□□□□ -1.41
PVT1-206ENST00000517838 C17orf107Q6ZR85 190 aa6.26□□□□□ -1.41
PVT1-206ENST00000517838 ZNF767PQ75MW2 155 aa6.26□□□□□ -1.41
PVT1-206ENST00000517838 SLC36A1Q7Z2H8 476 aa6.26□□□□□ -1.41
PVT1-206ENST00000517838 C1QL2Q7Z5L3 287 aa6.26□□□□□ -1.41
PVT1-206ENST00000517838 MDP1Q86V88 176 aa6.26□□□□□ -1.41
PVT1-206ENST00000517838 OSR2Q8N2R0 312 aa6.26□□□□□ -1.41
PVT1-206ENST00000517838 MUC20Q8N307 709 aaPredicted RBP6.26□□□□□ -1.41
PVT1-206ENST00000517838 CPEB3Q8NE35 698 aaKnown RBP6.26□□□□□ -1.41
PVT1-206ENST00000517838 OR5L1Q8NGL2 311 aa6.26□□□□□ -1.41
PVT1-206ENST00000517838 NEK7Q8TDX7 302 aa6.26□□□□□ -1.41
PVT1-206ENST00000517838 FAM216AQ8WUB2 273 aa6.26□□□□□ -1.41
PVT1-206ENST00000517838 MAFIPQ8WZ33 124 aa6.26□□□□□ -1.41
PVT1-206ENST00000517838 ELMOD3Q96FG2 381 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms