RNA–Protein interactions for RNA: ENST00000517514.1

CLN8-202, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 4

Gene CLN8, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-202ENST00000517514 CGB7P0DN87 165 aa8.15□□□□□ -1.1
CLN8-202ENST00000517514 NDUFB7P17568 137 aa8.15□□□□□ -1.1
CLN8-202ENST00000517514 ELK1P19419 428 aa8.15□□□□□ -1.1
CLN8-202ENST00000517514 CDK2P24941 298 aa8.15□□□□□ -1.1
CLN8-202ENST00000517514 NPY4RP50391 375 aa8.15□□□□□ -1.1
CLN8-202ENST00000517514 DLX6P56179 175 aa8.15□□□□□ -1.1
CLN8-202ENST00000517514 P2RX3P56373 397 aa8.15□□□□□ -1.1
CLN8-202ENST00000517514 AESQ08117 197 aa8.15□□□□□ -1.1
CLN8-202ENST00000517514 ZNF273Q14593 569 aa8.15□□□□□ -1.1
CLN8-202ENST00000517514 ATXN7L3Q14CW9 347 aaPredicted RBP8.15□□□□□ -1.1
CLN8-202ENST00000517514 GRK1Q15835 563 aa8.15□□□□□ -1.1
CLN8-202ENST00000517514 ESCO2Q56NI9 601 aa8.15□□□□□ -1.1
CLN8-202ENST00000517514 LRRC10Q5BKY1 277 aa8.15□□□□□ -1.1
CLN8-202ENST00000517514 ZNF497Q6ZNH5 498 aa8.15□□□□□ -1.1
CLN8-202ENST00000517514 NLRC3Q7RTR2 1065 aa8.15□□□□□ -1.1
CLN8-202ENST00000517514 LAX1Q8IWV1 398 aa8.15□□□□□ -1.1
CLN8-202ENST00000517514 C11orf42Q8N5U0 333 aa8.15□□□□□ -1.1
CLN8-202ENST00000517514 SAMD12Q8N8I0 201 aa8.15□□□□□ -1.1
CLN8-202ENST00000517514 LINC01356Q8N9X3 169 aa8.15□□□□□ -1.1
CLN8-202ENST00000517514 OR10R2Q8NGX6 335 aa8.15□□□□□ -1.1
CLN8-202ENST00000517514 ACOT12Q8WYK0 555 aa8.15□□□□□ -1.1
CLN8-202ENST00000517514 C18orf12Q96KH6 178 aa8.15□□□□□ -1.1
CLN8-202ENST00000517514 HDHD3Q9BSH5 251 aaPredicted RBP8.15□□□□□ -1.1
CLN8-202ENST00000517514 URM1Q9BTM9 101 aaKnown RBP8.15□□□□□ -1.1
CLN8-202ENST00000517514 ATG5Q9H1Y0 275 aa8.15□□□□□ -1.1
CLN8-202ENST00000517514 BATF3Q9NR55 127 aa8.15□□□□□ -1.1
CLN8-202ENST00000517514 GLS2Q9UI32 602 aa8.15□□□□□ -1.1
CLN8-202ENST00000517514 HSF4Q9ULV5 492 aa8.15□□□□□ -1.1
CLN8-202ENST00000517514 CSPG4Q6UVK1 2322 aa8.15□□□□□ -1.1
CLN8-202ENST00000517514 TLN2Q9Y4G6 2542 aa8.14□□□□□ -1.11
CLN8-202ENST00000517514 LOC105371242A0A075B767 164 aa8.14□□□□□ -1.11
CLN8-202ENST00000517514 IGHV2-70DA0A0C4DH43 119 aa8.14□□□□□ -1.11
CLN8-202ENST00000517514 KIR2DS1A0A191URI9 304 aa8.14□□□□□ -1.11
CLN8-202ENST00000517514 B4DSR2 109 aa8.14□□□□□ -1.11
CLN8-202ENST00000517514 FOXH1O75593 365 aa8.14□□□□□ -1.11
CLN8-202ENST00000517514 AVPP01185 164 aa8.14□□□□□ -1.11
CLN8-202ENST00000517514 APOA1P02647 267 aa8.14□□□□□ -1.11
CLN8-202ENST00000517514 MT-ND4P03905 459 aa8.14□□□□□ -1.11
CLN8-202ENST00000517514 GLAP06280 429 aa8.14□□□□□ -1.11
CLN8-202ENST00000517514 PTHLHP12272 177 aa8.14□□□□□ -1.11
CLN8-202ENST00000517514 HIST1H1DP16402 221 aaKnown RBP8.14□□□□□ -1.11
CLN8-202ENST00000517514 ZNF16P17020 682 aaPredicted RBP8.14□□□□□ -1.11
CLN8-202ENST00000517514 ERP29P30040 261 aaKnown RBP8.14□□□□□ -1.11
CLN8-202ENST00000517514 ERVFRD-1P60508 538 aa8.14□□□□□ -1.11
CLN8-202ENST00000517514 EDDM3AQ14507 147 aa8.14□□□□□ -1.11
CLN8-202ENST00000517514 CNPY1Q3B7I2 92 aa8.14□□□□□ -1.11
CLN8-202ENST00000517514 ZNF260Q3ZCT1 412 aa8.14□□□□□ -1.11
CLN8-202ENST00000517514 UBE2NLQ5JXB2 153 aa8.14□□□□□ -1.11
CLN8-202ENST00000517514 NKAPLQ5M9Q1 402 aa8.14□□□□□ -1.11
CLN8-202ENST00000517514 TMEM200BQ69YZ2 307 aa8.14□□□□□ -1.11
CLN8-202ENST00000517514 SLC35E4Q6ICL7 350 aa8.14□□□□□ -1.11
CLN8-202ENST00000517514 C1orf229Q6ZS94 237 aaPredicted RBP8.14□□□□□ -1.11
CLN8-202ENST00000517514 Q6ZTK2 550 aa8.14□□□□□ -1.11
CLN8-202ENST00000517514 IZUMO1Q8IYV9 350 aa8.14□□□□□ -1.11
CLN8-202ENST00000517514 Q8N7P7 452 aa8.14□□□□□ -1.11
CLN8-202ENST00000517514 OR56B1Q8NGI3 324 aa8.14□□□□□ -1.11
CLN8-202ENST00000517514 OR5D13Q8NGL4 314 aa8.14□□□□□ -1.11
CLN8-202ENST00000517514 OR13A1Q8NGR1 328 aa8.14□□□□□ -1.11
CLN8-202ENST00000517514 MRPL30Q8TCC3 161 aaKnown RBP8.14□□□□□ -1.11
CLN8-202ENST00000517514 RAB40AQ8WXH6 277 aa8.14□□□□□ -1.11
CLN8-202ENST00000517514 CMTM3Q96MX0 182 aa8.14□□□□□ -1.11
CLN8-202ENST00000517514 ZMAT3Q9HA38 289 aaKnown RBP8.14□□□□□ -1.11
CLN8-202ENST00000517514 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.14□□□□□ -1.11
CLN8-202ENST00000517514 AK3Q9UIJ7 227 aa8.14□□□□□ -1.11
CLN8-202ENST00000517514 KIF25Q9UIL4 384 aa8.14□□□□□ -1.11
CLN8-202ENST00000517514 INSIG2Q9Y5U4 225 aa8.14□□□□□ -1.11
CLN8-202ENST00000517514 ZFHX3Q15911 3703 aa8.14□□□□□ -1.11
CLN8-202ENST00000517514 F8P00451 2351 aa8.13□□□□□ -1.11
CLN8-202ENST00000517514 PPIAL4CA0A0B4J2A2 164 aa8.13□□□□□ -1.11
CLN8-202ENST00000517514 ODAMA1E959 279 aa8.13□□□□□ -1.11
CLN8-202ENST00000517514 MCRIP1C9JLW8 97 aa8.13□□□□□ -1.11
CLN8-202ENST00000517514 GPR37O15354 613 aa8.13□□□□□ -1.11
CLN8-202ENST00000517514 SSX5O60225 188 aa8.13□□□□□ -1.11
CLN8-202ENST00000517514 MMP23AO75900 390 aa8.13□□□□□ -1.11
CLN8-202ENST00000517514 LY6G6DO95868 133 aa8.13□□□□□ -1.11
CLN8-202ENST00000517514 NAPSAO96009 420 aa8.13□□□□□ -1.11
CLN8-202ENST00000517514 HLA-DQB1P01920 261 aa8.13□□□□□ -1.11
CLN8-202ENST00000517514 INHBBP09529 407 aa8.13□□□□□ -1.11
CLN8-202ENST00000517514 CD99P14209 185 aa8.13□□□□□ -1.11
CLN8-202ENST00000517514 MMP9P14780 707 aa8.13□□□□□ -1.11
CLN8-202ENST00000517514 GNB3P16520 340 aa8.13□□□□□ -1.11
CLN8-202ENST00000517514 CCL3L1P16619 93 aa8.13□□□□□ -1.11
CLN8-202ENST00000517514 SOX6P35712 828 aa8.13□□□□□ -1.11
CLN8-202ENST00000517514 GDNFP39905 211 aa8.13□□□□□ -1.11
CLN8-202ENST00000517514 RANBP1P43487 201 aa8.13□□□□□ -1.11
CLN8-202ENST00000517514 KCNJ3P48549 501 aa8.13□□□□□ -1.11
CLN8-202ENST00000517514 GZMKP49863 264 aa8.13□□□□□ -1.11
CLN8-202ENST00000517514 DVL1P1P54792 670 aaPredicted RBP8.13□□□□□ -1.11
CLN8-202ENST00000517514 DLX1P56177 255 aa8.13□□□□□ -1.11
CLN8-202ENST00000517514 EDDM3BP56851 147 aa8.13□□□□□ -1.11
CLN8-202ENST00000517514 RPL31P62899 125 aaKnown RBP8.13□□□□□ -1.11
CLN8-202ENST00000517514 PAX8Q06710 450 aa8.13□□□□□ -1.11
CLN8-202ENST00000517514 C17orf58Q2M2W7 97 aa8.13□□□□□ -1.11
CLN8-202ENST00000517514 CR1LQ2VPA4 569 aa8.13□□□□□ -1.11
CLN8-202ENST00000517514 C11orf91Q3C1V1 193 aa8.13□□□□□ -1.11
CLN8-202ENST00000517514 CDNFQ49AH0 187 aa8.13□□□□□ -1.11
CLN8-202ENST00000517514 KRBOX4Q5JUW0 171 aa8.13□□□□□ -1.11
CLN8-202ENST00000517514 UTF1Q5T230 341 aa8.13□□□□□ -1.11
CLN8-202ENST00000517514 CYB5R2Q6BCY4 276 aa8.13□□□□□ -1.11
CLN8-202ENST00000517514 ZNF880Q6PDB4 577 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms