RNA–Protein interactions for RNA: ENST00000517417.2

PCDHGA1-202, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHGA1, Length 4,604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-202ENST00000517417 ZNF727A8MUV8 499 aa9.5□□□□□ -0.89
PCDHGA1-202ENST00000517417 TGFBR3LH3BV60 316 aa9.5□□□□□ -0.89
PCDHGA1-202ENST00000517417 MASP2O00187 686 aa9.5□□□□□ -0.89
PCDHGA1-202ENST00000517417 MFNGO00587 321 aa9.5□□□□□ -0.89
PCDHGA1-202ENST00000517417 PPP1R2P9O14990 202 aa9.5□□□□□ -0.89
PCDHGA1-202ENST00000517417 CT45A6P0DMU7 189 aa9.5□□□□□ -0.89
PCDHGA1-202ENST00000517417 CT45A5P0DMU8 189 aa9.5□□□□□ -0.89
PCDHGA1-202ENST00000517417 CT45A7P0DMV0 189 aa9.5□□□□□ -0.89
PCDHGA1-202ENST00000517417 CT45A1Q5HYN5 189 aa9.5□□□□□ -0.89
PCDHGA1-202ENST00000517417 OR2A2Q6IF42 318 aa9.5□□□□□ -0.89
PCDHGA1-202ENST00000517417 SLC25A45Q8N413 288 aa9.5□□□□□ -0.89
PCDHGA1-202ENST00000517417 CT45A3Q8NHU0 189 aa9.5□□□□□ -0.89
PCDHGA1-202ENST00000517417 CMTM2Q8TAZ6 248 aa9.5□□□□□ -0.89
PCDHGA1-202ENST00000517417 SCARF2Q96GP6 870 aaPredicted RBP9.5□□□□□ -0.89
PCDHGA1-202ENST00000517417 RCL1Q9Y2P8 373 aaKnown RBP9.5□□□□□ -0.89
PCDHGA1-202ENST00000517417 CHD9Q3L8U1 2897 aa9.5□□□□□ -0.89
PCDHGA1-202ENST00000517417 C3orf80F5H4A9 247 aa9.49□□□□□ -0.89
PCDHGA1-202ENST00000517417 PDCD6O75340 191 aa9.49□□□□□ -0.89
PCDHGA1-202ENST00000517417 TTRP02766 147 aa9.49□□□□□ -0.89
PCDHGA1-202ENST00000517417 HNF1AP20823 631 aa9.49□□□□□ -0.89
PCDHGA1-202ENST00000517417 CEACAM6P40199 344 aa9.49□□□□□ -0.89
PCDHGA1-202ENST00000517417 TSPO2Q5TGU0 170 aa9.49□□□□□ -0.89
PCDHGA1-202ENST00000517417 NECAP1Q8NC96 275 aa9.49□□□□□ -0.89
PCDHGA1-202ENST00000517417 OR4F5Q8NH21 305 aa9.49□□□□□ -0.89
PCDHGA1-202ENST00000517417 ZNF385AQ96PM9 386 aaKnown RBP9.49□□□□□ -0.89
PCDHGA1-202ENST00000517417 OR4F4Q96R69 305 aa9.49□□□□□ -0.89
PCDHGA1-202ENST00000517417 RCC2Q9P258 522 aaKnown RBP9.49□□□□□ -0.89
PCDHGA1-202ENST00000517417 POMT1Q9Y6A1 747 aa9.49□□□□□ -0.89
PCDHGA1-202ENST00000517417 F6UZH7 168 aa9.49□□□□□ -0.89
PCDHGA1-202ENST00000517417 TSTD3H0UI37 97 aa9.49□□□□□ -0.89
PCDHGA1-202ENST00000517417 GPR37O15354 613 aa9.49□□□□□ -0.89
PCDHGA1-202ENST00000517417 IL11P20809 199 aa9.49□□□□□ -0.89
PCDHGA1-202ENST00000517417 SRSF3P84103 164 aaKnown RBP9.49□□□□□ -0.89
PCDHGA1-202ENST00000517417 HFEQ30201 348 aa9.49□□□□□ -0.89
PCDHGA1-202ENST00000517417 COMMD1Q8N668 190 aa9.49□□□□□ -0.89
PCDHGA1-202ENST00000517417 TMEM104Q8NE00 496 aa9.49□□□□□ -0.89
PCDHGA1-202ENST00000517417 RNF133Q8WVZ7 376 aa9.49□□□□□ -0.89
PCDHGA1-202ENST00000517417 OIT3Q8WWZ8 545 aa9.49□□□□□ -0.89
PCDHGA1-202ENST00000517417 CLDN23Q96B33 292 aa9.49□□□□□ -0.89
PCDHGA1-202ENST00000517417 ADAM19Q9H013 955 aa9.49□□□□□ -0.89
PCDHGA1-202ENST00000517417 TOLLIPQ9H0E2 274 aa9.49□□□□□ -0.89
PCDHGA1-202ENST00000517417 SLC2A8Q9NY64 477 aa9.49□□□□□ -0.89
PCDHGA1-202ENST00000517417 MIOXQ9UGB7 285 aa9.49□□□□□ -0.89
PCDHGA1-202ENST00000517417 M0R1X1 148 aa9.49□□□□□ -0.89
PCDHGA1-202ENST00000517417 SCGB1D1O95968 90 aa9.49□□□□□ -0.89
PCDHGA1-202ENST00000517417 MST1P26927 711 aa9.49□□□□□ -0.89
PCDHGA1-202ENST00000517417 LPAR6P43657 344 aa9.49□□□□□ -0.89
PCDHGA1-202ENST00000517417 MMP16P51512 607 aa9.49□□□□□ -0.89
PCDHGA1-202ENST00000517417 RPL11P62913 178 aaKnown RBP9.49□□□□□ -0.89
PCDHGA1-202ENST00000517417 FHL1Q13642 323 aa9.49□□□□□ -0.89
PCDHGA1-202ENST00000517417 ZNF239Q16600 458 aaKnown RBP9.49□□□□□ -0.89
PCDHGA1-202ENST00000517417 TEX30Q5JUR7 227 aa9.49□□□□□ -0.89
PCDHGA1-202ENST00000517417 NCMAPQ5T1S8 102 aa9.49□□□□□ -0.89
PCDHGA1-202ENST00000517417 RAB33BQ9H082 229 aa9.49□□□□□ -0.89
PCDHGA1-202ENST00000517417 MMP24Q9Y5R2 645 aa9.49□□□□□ -0.89
PCDHGA1-202ENST00000517417 H7BYZ3 331 aa9.49□□□□□ -0.89
PCDHGA1-202ENST00000517417 OR7C2O60412 319 aa9.49□□□□□ -0.89
PCDHGA1-202ENST00000517417 CRYABP02511 175 aaKnown RBP9.49□□□□□ -0.89
PCDHGA1-202ENST00000517417 HEXAP06865 529 aa9.49□□□□□ -0.89
PCDHGA1-202ENST00000517417 OR10J4P0C629 311 aa9.49□□□□□ -0.89
PCDHGA1-202ENST00000517417 S100A7AQ86SG5 101 aa9.49□□□□□ -0.89
PCDHGA1-202ENST00000517417 SLC39A7Q92504 469 aa9.49□□□□□ -0.89
PCDHGA1-202ENST00000517417 SLC35E1Q96K37 410 aa9.49□□□□□ -0.89
PCDHGA1-202ENST00000517417 ADGRG7Q96K78 797 aa9.49□□□□□ -0.89
PCDHGA1-202ENST00000517417 DMRTA2Q96SC8 542 aa9.49□□□□□ -0.89
PCDHGA1-202ENST00000517417 KCNIP2Q9NS61 270 aa9.49□□□□□ -0.89
PCDHGA1-202ENST00000517417 CARHSP1Q9Y2V2 147 aaKnown RBP9.49□□□□□ -0.89
PCDHGA1-202ENST00000517417 TCF20Q9UGU0 1960 aaKnown RBP9.49□□□□□ -0.89
PCDHGA1-202ENST00000517417 IGHV3-43A0A0B4J1X8 118 aa9.48□□□□□ -0.89
PCDHGA1-202ENST00000517417 A0A1W2PP11 408 aa9.48□□□□□ -0.89
PCDHGA1-202ENST00000517417 ZNHIT1O43257 154 aa9.48□□□□□ -0.89
PCDHGA1-202ENST00000517417 DXOO77932 396 aaKnown RBP9.48□□□□□ -0.89
PCDHGA1-202ENST00000517417 IGHV3-43DP0DP04 118 aa9.48□□□□□ -0.89
PCDHGA1-202ENST00000517417 BSCL2Q96G97 398 aaPredicted RBP9.48□□□□□ -0.89
PCDHGA1-202ENST00000517417 TECTBQ96PL2 329 aa9.48□□□□□ -0.89
PCDHGA1-202ENST00000517417 PARP11Q9NR21 331 aa9.48□□□□□ -0.89
PCDHGA1-202ENST00000517417 GPR132Q9UNW8 380 aa9.48□□□□□ -0.89
PCDHGA1-202ENST00000517417 COL6A6A6NMZ7 2263 aa9.48□□□□□ -0.89
PCDHGA1-202ENST00000517417 LOC101059948A0A1B0GTJ6 334 aa9.48□□□□□ -0.89
PCDHGA1-202ENST00000517417 MSGN1A6NI15 193 aa9.48□□□□□ -0.89
PCDHGA1-202ENST00000517417 ADAM10O14672 748 aa9.48□□□□□ -0.89
PCDHGA1-202ENST00000517417 DTYMKP23919 212 aa9.48□□□□□ -0.89
PCDHGA1-202ENST00000517417 ID4P47928 161 aa9.48□□□□□ -0.89
PCDHGA1-202ENST00000517417 PLAURQ03405 335 aa9.48□□□□□ -0.89
PCDHGA1-202ENST00000517417 RTL8BQ17RB0 113 aa9.48□□□□□ -0.89
PCDHGA1-202ENST00000517417 BAGE3Q86Y29 109 aa9.48□□□□□ -0.89
PCDHGA1-202ENST00000517417 BAGE2Q86Y30 109 aa9.48□□□□□ -0.89
PCDHGA1-202ENST00000517417 FLVCR1-AS1Q8TAF5 88 aa9.48□□□□□ -0.89
PCDHGA1-202ENST00000517417 OR10C1Q96KK4 312 aa9.48□□□□□ -0.89
PCDHGA1-202ENST00000517417 SLC26A1Q9H2B4 701 aa9.48□□□□□ -0.89
PCDHGA1-202ENST00000517417 TMPRSS5Q9H3S3 457 aa9.48□□□□□ -0.89
PCDHGA1-202ENST00000517417 TMEM30CPA0ZSE6 113 aa9.48□□□□□ -0.89
PCDHGA1-202ENST00000517417 PQLC2LA1A4F0 135 aa9.48□□□□□ -0.89
PCDHGA1-202ENST00000517417 BTBD17A6NE02 478 aa9.48□□□□□ -0.89
PCDHGA1-202ENST00000517417 ZNF735P0CB33 412 aa9.48□□□□□ -0.89
PCDHGA1-202ENST00000517417 RAB5AP20339 215 aa9.48□□□□□ -0.89
PCDHGA1-202ENST00000517417 SUB1P53999 127 aaKnown RBP eCLIP9.48□□□□□ -0.89
PCDHGA1-202ENST00000517417 B2MP61769 119 aa9.48□□□□□ -0.89
PCDHGA1-202ENST00000517417 C21orf62-AS1Q17RA5 79 aa9.48□□□□□ -0.89
PCDHGA1-202ENST00000517417 ANKRD55Q3KP44 614 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms