RNA–Protein interactions for RNA: ENST00000517403.5

PABPC1-202, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-202ENST00000517403 CLIC3O95833 236 aa6.85□□□□□ -1.31
PABPC1-202ENST00000517403 ZNF19P17023 458 aa6.85□□□□□ -1.31
PABPC1-202ENST00000517403 HOXB6P17509 224 aaKnown RBP6.85□□□□□ -1.31
PABPC1-202ENST00000517403 OR3A4PP47883 348 aa6.85□□□□□ -1.31
PABPC1-202ENST00000517403 RBP2P50120 134 aa6.85□□□□□ -1.31
PABPC1-202ENST00000517403 MTCP1P56278 107 aa6.85□□□□□ -1.31
PABPC1-202ENST00000517403 ACTR3P61158 418 aa6.85□□□□□ -1.31
PABPC1-202ENST00000517403 MEF2CQ06413 473 aaPredicted RBP6.85□□□□□ -1.31
PABPC1-202ENST00000517403 ALKBH1Q13686 389 aaKnown RBP6.85□□□□□ -1.31
PABPC1-202ENST00000517403 ABCA11PQ4W5N1 156 aa6.85□□□□□ -1.31
PABPC1-202ENST00000517403 SLC25A30Q5SVS4 291 aa6.85□□□□□ -1.31
PABPC1-202ENST00000517403 TPTE2P1Q5T6R2 138 aa6.85□□□□□ -1.31
PABPC1-202ENST00000517403 OR2G6Q5TZ20 316 aa6.85□□□□□ -1.31
PABPC1-202ENST00000517403 RSBN1Q5VWQ0 802 aaPredicted RBP6.85□□□□□ -1.31
PABPC1-202ENST00000517403 LAIR2Q6ISS4 152 aa6.85□□□□□ -1.31
PABPC1-202ENST00000517403 HEPN1Q6WQI6 88 aa6.85□□□□□ -1.31
PABPC1-202ENST00000517403 CCDC121Q6ZUS5 278 aa6.85□□□□□ -1.31
PABPC1-202ENST00000517403 NDUFA11Q86Y39 141 aa6.85□□□□□ -1.31
PABPC1-202ENST00000517403 ABHD12Q8N2K0 398 aa6.85□□□□□ -1.31
PABPC1-202ENST00000517403 OR52I1Q8NGK6 324 aa6.85□□□□□ -1.31
PABPC1-202ENST00000517403 OR13C3Q8NGS6 347 aa6.85□□□□□ -1.31
PABPC1-202ENST00000517403 OR13D1Q8NGV5 346 aa6.85□□□□□ -1.31
PABPC1-202ENST00000517403 NDNFQ8TB73 568 aa6.85□□□□□ -1.31
PABPC1-202ENST00000517403 PP6455Q8WZ26 134 aa6.85□□□□□ -1.31
PABPC1-202ENST00000517403 CORO2AQ92828 525 aa6.85□□□□□ -1.31
PABPC1-202ENST00000517403 MYDGFQ969H8 173 aa6.85□□□□□ -1.31
PABPC1-202ENST00000517403 ITFG2Q969R8 447 aa6.85□□□□□ -1.31
PABPC1-202ENST00000517403 R3HDM4Q96D70 268 aa6.85□□□□□ -1.31
PABPC1-202ENST00000517403 ALG8Q9BVK2 526 aa6.85□□□□□ -1.31
PABPC1-202ENST00000517403 CLEC7AQ9BXN2 247 aa6.85□□□□□ -1.31
PABPC1-202ENST00000517403 PRRG3Q9BZD7 231 aa6.85□□□□□ -1.31
PABPC1-202ENST00000517403 INPP5EQ9NRR6 644 aa6.85□□□□□ -1.31
PABPC1-202ENST00000517403 ERVK13-1Q9NX77 482 aa6.85□□□□□ -1.31
PABPC1-202ENST00000517403 KIF25Q9UIL4 384 aa6.85□□□□□ -1.31
PABPC1-202ENST00000517403 SLC7A11Q9UPY5 501 aa6.85□□□□□ -1.31
PABPC1-202ENST00000517403 A0A087X0M5 115 aa6.84□□□□□ -1.31
PABPC1-202ENST00000517403 A0A1B0GX30 115 aa6.84□□□□□ -1.31
PABPC1-202ENST00000517403 hADV38S2A0JD32 116 aa6.84□□□□□ -1.31
PABPC1-202ENST00000517403 DAPL1A0PJW8 107 aa6.84□□□□□ -1.31
PABPC1-202ENST00000517403 SLC31A2O15432 143 aa6.84□□□□□ -1.31
PABPC1-202ENST00000517403 MT-ND2P03891 347 aa6.84□□□□□ -1.31
PABPC1-202ENST00000517403 CSN2P05814 226 aa6.84□□□□□ -1.31
PABPC1-202ENST00000517403 HTR1AP08908 422 aa6.84□□□□□ -1.31
PABPC1-202ENST00000517403 PEX2P28328 305 aa6.84□□□□□ -1.31
PABPC1-202ENST00000517403 ERP29P30040 261 aaKnown RBP6.84□□□□□ -1.31
PABPC1-202ENST00000517403 ADMP35318 185 aa6.84□□□□□ -1.31
PABPC1-202ENST00000517403 VDAC2P45880 294 aaPredicted RBP6.84□□□□□ -1.31
PABPC1-202ENST00000517403 SOX2P48431 317 aa6.84□□□□□ -1.31
PABPC1-202ENST00000517403 ETV1P50549 477 aa6.84□□□□□ -1.31
PABPC1-202ENST00000517403 ATP1B3P54709 279 aa6.84□□□□□ -1.31
PABPC1-202ENST00000517403 LGALS4P56470 323 aa6.84□□□□□ -1.31
PABPC1-202ENST00000517403 BDH1Q02338 343 aa6.84□□□□□ -1.31
PABPC1-202ENST00000517403 SCN1BQ07699 218 aa6.84□□□□□ -1.31
PABPC1-202ENST00000517403 SPIN3Q5JUX0 258 aa6.84□□□□□ -1.31
PABPC1-202ENST00000517403 MINOS1Q5TGZ0 78 aa6.84□□□□□ -1.31
PABPC1-202ENST00000517403 LCNL1Q6ZST4 164 aa6.84□□□□□ -1.31
PABPC1-202ENST00000517403 ZNF485Q8NCK3 441 aa6.84□□□□□ -1.31
PABPC1-202ENST00000517403 OR5AU1Q8NGC0 362 aa6.84□□□□□ -1.31
PABPC1-202ENST00000517403 NOL4LQ96MY1 436 aaPredicted RBP6.84□□□□□ -1.31
PABPC1-202ENST00000517403 DUX3Q96PT4 197 aa6.84□□□□□ -1.31
PABPC1-202ENST00000517403 SLC25A33Q9BSK2 321 aa6.84□□□□□ -1.31
PABPC1-202ENST00000517403 TEX12Q9BXU0 123 aa6.84□□□□□ -1.31
PABPC1-202ENST00000517403 EXOSC4Q9NPD3 245 aaKnown RBP6.84□□□□□ -1.31
PABPC1-202ENST00000517403 LINC00527Q9UJ94 153 aa6.84□□□□□ -1.31
PABPC1-202ENST00000517403 UBE2J1Q9Y385 318 aaPredicted RBP6.84□□□□□ -1.31
PABPC1-202ENST00000517403 MINOS1-NBL1R4GNA1 71 aa6.84□□□□□ -1.31
PABPC1-202ENST00000517403 U3KQE9 123 aa6.84□□□□□ -1.31
PABPC1-202ENST00000517403 TRAV8-7A0A075B6U6 113 aa6.83□□□□□ -1.32
PABPC1-202ENST00000517403 FAM90A18PA6NE21 464 aa6.83□□□□□ -1.32
PABPC1-202ENST00000517403 FAM90A16PA6NEW6 464 aa6.83□□□□□ -1.32
PABPC1-202ENST00000517403 FAM90A20PA6NIJ5 464 aa6.83□□□□□ -1.32
PABPC1-202ENST00000517403 FAM90A9PA6NNJ1 464 aa6.83□□□□□ -1.32
PABPC1-202ENST00000517403 FAM90A12PA8MX19 464 aa6.83□□□□□ -1.32
PABPC1-202ENST00000517403 FAM90A5PA8MXJ8 464 aa6.83□□□□□ -1.32
PABPC1-202ENST00000517403 ZNF736B4DX44 427 aaPredicted RBP6.83□□□□□ -1.32
PABPC1-202ENST00000517403 H0YJX3 145 aa6.83□□□□□ -1.32
PABPC1-202ENST00000517403 BUB1B-PAK6H3BSN5 160 aa6.83□□□□□ -1.32
PABPC1-202ENST00000517403 PIN1P1O15428 100 aa6.83□□□□□ -1.32
PABPC1-202ENST00000517403 CDRT1O95170 752 aa6.83□□□□□ -1.32
PABPC1-202ENST00000517403 SNRNP70P08621 437 aaKnown RBP6.83□□□□□ -1.32
PABPC1-202ENST00000517403 FAM90A15PP0C7V4 464 aa6.83□□□□□ -1.32
PABPC1-202ENST00000517403 FAM90A13PP0C7W8 464 aa6.83□□□□□ -1.32
PABPC1-202ENST00000517403 FAM90A14PP0C7W9 464 aa6.83□□□□□ -1.32
PABPC1-202ENST00000517403 FAM90A24PP0C7X0 464 aa6.83□□□□□ -1.32
PABPC1-202ENST00000517403 ZNF44P15621 663 aa6.83□□□□□ -1.32
PABPC1-202ENST00000517403 ZNF20P17024 532 aa6.83□□□□□ -1.32
PABPC1-202ENST00000517403 HTR1DP28221 377 aa6.83□□□□□ -1.32
PABPC1-202ENST00000517403 HOXD3P31249 432 aaPredicted RBP6.83□□□□□ -1.32
PABPC1-202ENST00000517403 GLP1RP43220 463 aa6.83□□□□□ -1.32
PABPC1-202ENST00000517403 MTNR1BP49286 362 aa6.83□□□□□ -1.32
PABPC1-202ENST00000517403 GNG10P50151 68 aa6.83□□□□□ -1.32
PABPC1-202ENST00000517403 ALDH3A2P51648 485 aa6.83□□□□□ -1.32
PABPC1-202ENST00000517403 CCR9P51686 369 aa6.83□□□□□ -1.32
PABPC1-202ENST00000517403 RPS11P62280 158 aaKnown RBP eCLIP6.83□□□□□ -1.32
PABPC1-202ENST00000517403 TMED1Q13445 227 aa6.83□□□□□ -1.32
PABPC1-202ENST00000517403 KISS1Q15726 138 aa6.83□□□□□ -1.32
PABPC1-202ENST00000517403 LTC4SQ16873 150 aa6.83□□□□□ -1.32
PABPC1-202ENST00000517403 ZNF691Q5VV52 312 aa6.83□□□□□ -1.32
PABPC1-202ENST00000517403 TMEM244Q5VVB8 128 aa6.83□□□□□ -1.32
PABPC1-202ENST00000517403 FAM220AQ7Z4H9 259 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms