RNA–Protein interactions for RNA: ENST00000517276.1

SCARNA11.3-201, small Cajal body-specific RNA 11, humanhuman

BASIC

Gene SCARNA11, Length 130 nt, Biotype scaRNA, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA11.3-201ENST00000517276 OR2T4Q8NH00 348 aa1.91□□□□□ -2.1
SCARNA11.3-201ENST00000517276 Q8WTZ3 238 aa1.91□□□□□ -2.1
SCARNA11.3-201ENST00000517276 TWIST2Q8WVJ9 160 aa1.91□□□□□ -2.1
SCARNA11.3-201ENST00000517276 YIPF5Q969M3 257 aa1.91□□□□□ -2.1
SCARNA11.3-201ENST00000517276 FAM104AQ969W3 186 aa1.91□□□□□ -2.1
SCARNA11.3-201ENST00000517276 TAMM41Q96BW9 452 aa1.91□□□□□ -2.1
SCARNA11.3-201ENST00000517276 SNF8Q96H20 258 aa1.91□□□□□ -2.1
SCARNA11.3-201ENST00000517276 C1orf147Q96MC9 270 aaPredicted RBP1.91□□□□□ -2.1
SCARNA11.3-201ENST00000517276 OR2A7Q96R45 310 aa1.91□□□□□ -2.1
SCARNA11.3-201ENST00000517276 SIGMAR1Q99720 223 aa1.91□□□□□ -2.1
SCARNA11.3-201ENST00000517276 NIPSNAP1Q9BPW8 284 aa1.91□□□□□ -2.1
SCARNA11.3-201ENST00000517276 ZNF649Q9BS31 505 aa1.91□□□□□ -2.1
SCARNA11.3-201ENST00000517276 EBPLQ9BY08 206 aa1.91□□□□□ -2.1
SCARNA11.3-201ENST00000517276 GNB1LQ9BYB4 327 aa1.91□□□□□ -2.1
SCARNA11.3-201ENST00000517276 SND1-IT1Q9HBX3 110 aa1.91□□□□□ -2.1
SCARNA11.3-201ENST00000517276 PARP11Q9NR21 331 aa1.91□□□□□ -2.1
SCARNA11.3-201ENST00000517276 PLSCR3Q9NRY6 295 aa1.91□□□□□ -2.1
SCARNA11.3-201ENST00000517276 ZNF391Q9UJN7 358 aa1.91□□□□□ -2.1
SCARNA11.3-201ENST00000517276 ZNF223Q9UK11 482 aaPredicted RBP1.91□□□□□ -2.1
SCARNA11.3-201ENST00000517276 POMPQ9Y244 141 aa1.91□□□□□ -2.1
SCARNA11.3-201ENST00000517276 POLR1DQ9Y2S0 133 aa1.91□□□□□ -2.1
SCARNA11.3-201ENST00000517276 HDGFL3Q9Y3E1 203 aa1.91□□□□□ -2.1
SCARNA11.3-201ENST00000517276 LSM5Q9Y4Y9 91 aaKnown RBP1.91□□□□□ -2.1
SCARNA11.3-201ENST00000517276 ZNF780BQ9Y6R6 833 aa1.91□□□□□ -2.1
SCARNA11.3-201ENST00000517276 SETD1AO15047 1707 aaKnown RBP1.91□□□□□ -2.1
SCARNA11.3-201ENST00000517276 PIKFYVEQ9Y2I7 2098 aa1.9□□□□□ -2.1
SCARNA11.3-201ENST00000517276 SCN2AQ99250 2005 aa1.9□□□□□ -2.11
SCARNA11.3-201ENST00000517276 IGHV2-26A0A0B4J1V2 119 aa1.9□□□□□ -2.11
SCARNA11.3-201ENST00000517276 A0A0G2JMP0 313 aa1.9□□□□□ -2.11
SCARNA11.3-201ENST00000517276 A0A0X1KG70 313 aa1.9□□□□□ -2.11
SCARNA11.3-201ENST00000517276 GNG14A0A1W2PPG7 69 aa1.9□□□□□ -2.11
SCARNA11.3-201ENST00000517276 OR6C6A6NF89 314 aa1.9□□□□□ -2.11
SCARNA11.3-201ENST00000517276 C2orf74A8MZ97 194 aa1.9□□□□□ -2.11
SCARNA11.3-201ENST00000517276 KLLNB2CW77 178 aa1.9□□□□□ -2.11
SCARNA11.3-201ENST00000517276 ZNF878C9JN71 531 aa1.9□□□□□ -2.11
SCARNA11.3-201ENST00000517276 LAD1O00515 517 aa1.9□□□□□ -2.11
SCARNA11.3-201ENST00000517276 UPK2O00526 184 aa1.9□□□□□ -2.11
SCARNA11.3-201ENST00000517276 KLRC4O43908 158 aa1.9□□□□□ -2.11
SCARNA11.3-201ENST00000517276 PLIN3O60664 434 aa1.9□□□□□ -2.11
SCARNA11.3-201ENST00000517276 SS18L1O75177 396 aaPredicted RBP1.9□□□□□ -2.11
SCARNA11.3-201ENST00000517276 YIF1AO95070 293 aa1.9□□□□□ -2.11
SCARNA11.3-201ENST00000517276 CYB5R3P00387 301 aaPredicted RBP1.9□□□□□ -2.11
SCARNA11.3-201ENST00000517276 CECR9P0C854 216 aa1.9□□□□□ -2.11
SCARNA11.3-201ENST00000517276 OMGP23515 440 aa1.9□□□□□ -2.11
SCARNA11.3-201ENST00000517276 PRTN3P24158 256 aa1.9□□□□□ -2.11
SCARNA11.3-201ENST00000517276 MAP2K4P45985 399 aa1.9□□□□□ -2.11
SCARNA11.3-201ENST00000517276 CRYBA4P53673 196 aa1.9□□□□□ -2.11
SCARNA11.3-201ENST00000517276 H2BFSP57053 126 aa1.9□□□□□ -2.11
SCARNA11.3-201ENST00000517276 RIPPLY3P57055 190 aa1.9□□□□□ -2.11
SCARNA11.3-201ENST00000517276 RAB2AP61019 212 aa1.9□□□□□ -2.11
SCARNA11.3-201ENST00000517276 PSG4Q00888 419 aa1.9□□□□□ -2.11
SCARNA11.3-201ENST00000517276 DAZ2Q13117 558 aaKnown RBP1.9□□□□□ -2.11
SCARNA11.3-201ENST00000517276 PRDX4Q13162 271 aa1.9□□□□□ -2.11
SCARNA11.3-201ENST00000517276 C16orf72Q14CZ0 275 aa1.9□□□□□ -2.11
SCARNA11.3-201ENST00000517276 ALX1Q15699 326 aa1.9□□□□□ -2.11
SCARNA11.3-201ENST00000517276 SSX1Q16384 188 aa1.9□□□□□ -2.11
SCARNA11.3-201ENST00000517276 HIST3H3Q16695 136 aa1.9□□□□□ -2.11
SCARNA11.3-201ENST00000517276 TMEM241Q24JQ0 296 aa1.9□□□□□ -2.11
SCARNA11.3-201ENST00000517276 UBE2NLQ5JXB2 153 aa1.9□□□□□ -2.11
SCARNA11.3-201ENST00000517276 CLLU1OSQ5K130 101 aa1.9□□□□□ -2.11
SCARNA11.3-201ENST00000517276 TMEM42Q69YG0 159 aa1.9□□□□□ -2.11
SCARNA11.3-201ENST00000517276 ELP2Q6IA86 826 aa1.9□□□□□ -2.11
SCARNA11.3-201ENST00000517276 SHISA6Q6ZSJ9 500 aa1.9□□□□□ -2.11
SCARNA11.3-201ENST00000517276 ATP5L2Q7Z4Y8 100 aa1.9□□□□□ -2.11
SCARNA11.3-201ENST00000517276 VN1R4Q7Z5H5 301 aa1.9□□□□□ -2.11
SCARNA11.3-201ENST00000517276 CAMK2N1Q7Z7J9 78 aa1.9□□□□□ -2.11
SCARNA11.3-201ENST00000517276 SLC51BQ86UW2 128 aa1.9□□□□□ -2.11
SCARNA11.3-201ENST00000517276 ZNF429Q86V71 674 aa1.9□□□□□ -2.11
SCARNA11.3-201ENST00000517276 ITPRIPQ8IWB1 547 aa1.9□□□□□ -2.11
SCARNA11.3-201ENST00000517276 C14orf178Q8N769 122 aaPredicted RBP1.9□□□□□ -2.11
SCARNA11.3-201ENST00000517276 SLC35G3Q8N808 338 aa1.9□□□□□ -2.11
SCARNA11.3-201ENST00000517276 Q8N9P0 234 aaPredicted RBP1.9□□□□□ -2.11
SCARNA11.3-201ENST00000517276 DCAF4L2Q8NA75 395 aa1.9□□□□□ -2.11
SCARNA11.3-201ENST00000517276 OR10G4Q8NGN3 311 aa1.9□□□□□ -2.11
SCARNA11.3-201ENST00000517276 OR2K2Q8NGT1 345 aa1.9□□□□□ -2.11
SCARNA11.3-201ENST00000517276 LINC01006Q8NI28 216 aa1.9□□□□□ -2.11
SCARNA11.3-201ENST00000517276 TNFAIP8L1Q8WVP5 186 aa1.9□□□□□ -2.11
SCARNA11.3-201ENST00000517276 RASSF5Q8WWW0 418 aa1.9□□□□□ -2.11
SCARNA11.3-201ENST00000517276 TMBIM1Q969X1 311 aa1.9□□□□□ -2.11
SCARNA11.3-201ENST00000517276 CPNE2Q96FN4 548 aaPredicted RBP1.9□□□□□ -2.11
SCARNA11.3-201ENST00000517276 LINC00477Q96M19 166 aa1.9□□□□□ -2.11
SCARNA11.3-201ENST00000517276 PARP12Q9H0J9 701 aaKnown RBP1.9□□□□□ -2.11
SCARNA11.3-201ENST00000517276 OR52D1Q9H346 318 aa1.9□□□□□ -2.11
SCARNA11.3-201ENST00000517276 ZSCAN16Q9H4T2 348 aaPredicted RBP1.9□□□□□ -2.11
SCARNA11.3-201ENST00000517276 DAZ3Q9NR90 486 aaKnown RBP1.9□□□□□ -2.11
SCARNA11.3-201ENST00000517276 VNN3Q9NY84 501 aa1.9□□□□□ -2.11
SCARNA11.3-201ENST00000517276 PAK5Q9P286 719 aa1.9□□□□□ -2.11
SCARNA11.3-201ENST00000517276 GLS2Q9UI32 602 aa1.9□□□□□ -2.11
SCARNA11.3-201ENST00000517276 YTHDF2Q9Y5A9 579 aaKnown RBP1.9□□□□□ -2.11
SCARNA11.3-201ENST00000517276 MYO15BQ96JP2 1530 aa1.9□□□□□ -2.11
SCARNA11.3-201ENST00000517276 NPHP4O75161 1426 aaPredicted RBP1.9□□□□□ -2.11
SCARNA11.3-201ENST00000517276 TET2Q6N021 2002 aaPredicted RBP1.9□□□□□ -2.11
SCARNA11.3-201ENST00000517276 EIF3AQ14152 1382 aaKnown RBP1.89□□□□□ -2.11
SCARNA11.3-201ENST00000517276 TSPOAP1O95153 1857 aa1.89□□□□□ -2.11
SCARNA11.3-201ENST00000517276 A0A0U1RQV1 116 aa1.89□□□□□ -2.11
SCARNA11.3-201ENST00000517276 ARGFXA6NJG6 315 aa1.89□□□□□ -2.11
SCARNA11.3-201ENST00000517276 OR5H1A6NKK0 313 aa1.89□□□□□ -2.11
SCARNA11.3-201ENST00000517276 KRTAP16-1A8MUX0 517 aa1.89□□□□□ -2.11
SCARNA11.3-201ENST00000517276 M0QYV0 167 aa1.89□□□□□ -2.11
SCARNA11.3-201ENST00000517276 LGALS9O00182 355 aa1.89□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms