RNA–Protein interactions for RNA: ENST00000515838.2

RBM4-209, Transcript of RNA binding motif protein 4, human

TSL 2

Gene RBM4, Length 943 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM4-209	ENST00000515838	BUB1B-PAK6	H3BSN5	160 aa		11.97	□□□□□ -0.49
RBM4-209	ENST00000515838	SCN1B	Q07699	218 aa		11.97	□□□□□ -0.49
RBM4-209	ENST00000515838	CDK5R1	Q15078	307 aa		11.97	□□□□□ -0.49
RBM4-209	ENST00000515838	BEAN1	Q3B7T3	259 aa		11.97	□□□□□ -0.49
RBM4-209	ENST00000515838	PAN3	Q58A45	887 aa	Known RBP	11.97	□□□□□ -0.49
RBM4-209	ENST00000515838	NHLRC3	Q5JS37	347 aa		11.97	□□□□□ -0.49
RBM4-209	ENST00000515838	LINC00596	Q86U02	117 aa		11.97	□□□□□ -0.49
RBM4-209	ENST00000515838	C11orf44	Q8N8P7	122 aa		11.97	□□□□□ -0.49
RBM4-209	ENST00000515838	OR9G1	Q8NH87	305 aa		11.97	□□□□□ -0.49
RBM4-209	ENST00000515838	COQ2	Q96H96	371 aa		11.97	□□□□□ -0.49
RBM4-209	ENST00000515838	PDCD1LG2	Q9BQ51	273 aa		11.97	□□□□□ -0.49
RBM4-209	ENST00000515838	IFT22	Q9H7X7	185 aa		11.97	□□□□□ -0.49
RBM4-209	ENST00000515838	SMPD3	Q9NY59	655 aa	Predicted RBP	11.97	□□□□□ -0.49
RBM4-209	ENST00000515838	IL36G	Q9NZH8	169 aa		11.97	□□□□□ -0.49
RBM4-209	ENST00000515838	ZNF780A	O75290	641 aa	Predicted RBP	11.96	□□□□□ -0.49
RBM4-209	ENST00000515838	MMP23A	O75900	390 aa		11.96	□□□□□ -0.49
RBM4-209	ENST00000515838	CALCB	P10092	127 aa		11.96	□□□□□ -0.49
RBM4-209	ENST00000515838	BLCAP	P62952	87 aa		11.96	□□□□□ -0.49
RBM4-209	ENST00000515838	PPP3R1	P63098	170 aa		11.96	□□□□□ -0.49
RBM4-209	ENST00000515838	HABP2	Q14520	560 aa	Predicted RBP	11.96	□□□□□ -0.49
RBM4-209	ENST00000515838	ATXN7L3	Q14CW9	347 aa	Predicted RBP	11.96	□□□□□ -0.49
RBM4-209	ENST00000515838	RSU1	Q15404	277 aa		11.96	□□□□□ -0.49
RBM4-209	ENST00000515838	TPTE2P1	Q5T6R2	138 aa		11.96	□□□□□ -0.49
RBM4-209	ENST00000515838	ASCL4	Q6XD76	172 aa		11.96	□□□□□ -0.49
RBM4-209	ENST00000515838	CNIH3	Q8TBE1	160 aa		11.96	□□□□□ -0.49
RBM4-209	ENST00000515838	TNFAIP8L1	Q8WVP5	186 aa		11.96	□□□□□ -0.49
RBM4-209	ENST00000515838	RBM14	Q96PK6	669 aa	Known RBP	11.96	□□□□□ -0.49
RBM4-209	ENST00000515838	SLC29A1	Q99808	456 aa		11.96	□□□□□ -0.49
RBM4-209	ENST00000515838	OCSTAMP	Q9BR26	566 aa		11.96	□□□□□ -0.49
RBM4-209	ENST00000515838	MMP28	Q9H239	520 aa		11.96	□□□□□ -0.49
RBM4-209	ENST00000515838	ZNF286A	Q9HBT8	521 aa		11.96	□□□□□ -0.49
RBM4-209	ENST00000515838	AMBN	Q9NP70	447 aa		11.96	□□□□□ -0.49
RBM4-209	ENST00000515838	TMEM138	Q9NPI0	162 aa		11.96	□□□□□ -0.49
RBM4-209	ENST00000515838	NKX1-2	Q9UD57	310 aa	Predicted RBP	11.96	□□□□□ -0.49
RBM4-209	ENST00000515838		E9PI62	339 aa		11.95	□□□□□ -0.5
RBM4-209	ENST00000515838	IL1A	P01583	271 aa		11.95	□□□□□ -0.5
RBM4-209	ENST00000515838	FAM106CP	P0CH98	169 aa		11.95	□□□□□ -0.5
RBM4-209	ENST00000515838	LIMS3	P0CW19	117 aa		11.95	□□□□□ -0.5
RBM4-209	ENST00000515838	LIMS4	P0CW20	117 aa		11.95	□□□□□ -0.5
RBM4-209	ENST00000515838	CD28	P10747	220 aa		11.95	□□□□□ -0.5
RBM4-209	ENST00000515838	MYL12A	P19105	171 aa		11.95	□□□□□ -0.5
RBM4-209	ENST00000515838	C17orf58	Q2M2W7	97 aa		11.95	□□□□□ -0.5
RBM4-209	ENST00000515838	NSUN5P1	Q3KNT7	163 aa		11.95	□□□□□ -0.5
RBM4-209	ENST00000515838	THNSL2	Q86YJ6	484 aa		11.95	□□□□□ -0.5
RBM4-209	ENST00000515838	SETD9	Q8NE22	299 aa		11.95	□□□□□ -0.5
RBM4-209	ENST00000515838	TMEM106A	Q96A25	262 aa		11.95	□□□□□ -0.5
RBM4-209	ENST00000515838	R3HDM4	Q96D70	268 aa		11.95	□□□□□ -0.5
RBM4-209	ENST00000515838	KIRREL1	Q96J84	757 aa		11.95	□□□□□ -0.5
RBM4-209	ENST00000515838	S100A13	Q99584	98 aa		11.95	□□□□□ -0.5
RBM4-209	ENST00000515838	CITED2	Q99967	270 aa	Predicted RBP	11.95	□□□□□ -0.5
RBM4-209	ENST00000515838	SLC25A33	Q9BSK2	321 aa		11.95	□□□□□ -0.5
RBM4-209	ENST00000515838	DCLRE1B	Q9H816	532 aa		11.95	□□□□□ -0.5
RBM4-209	ENST00000515838	CALY	Q9NYX4	217 aa		11.95	□□□□□ -0.5
RBM4-209	ENST00000515838	MEIKIN	A0A087WXM9	373 aa		11.94	□□□□□ -0.5
RBM4-209	ENST00000515838	LY6L	H3BQJ8	138 aa		11.94	□□□□□ -0.5
RBM4-209	ENST00000515838	GABRP	O00591	440 aa		11.94	□□□□□ -0.5
RBM4-209	ENST00000515838	CGB3	P0DN86	165 aa		11.94	□□□□□ -0.5
RBM4-209	ENST00000515838	CGB7	P0DN87	165 aa		11.94	□□□□□ -0.5
RBM4-209	ENST00000515838	GLP1R	P43220	463 aa		11.94	□□□□□ -0.5
RBM4-209	ENST00000515838	RAB7A	P51149	207 aa		11.94	□□□□□ -0.5
RBM4-209	ENST00000515838	CD83	Q01151	205 aa		11.94	□□□□□ -0.5
RBM4-209	ENST00000515838	MADCAM1	Q13477	382 aa		11.94	□□□□□ -0.5
RBM4-209	ENST00000515838	RCN1	Q15293	331 aa		11.94	□□□□□ -0.5
RBM4-209	ENST00000515838	TTC23	Q5W5X9	447 aa		11.94	□□□□□ -0.5
RBM4-209	ENST00000515838	C1QL4	Q86Z23	238 aa		11.94	□□□□□ -0.5
RBM4-209	ENST00000515838	OR8H3	Q8N146	312 aa		11.94	□□□□□ -0.5
RBM4-209	ENST00000515838	OR5AU1	Q8NGC0	362 aa		11.94	□□□□□ -0.5
RBM4-209	ENST00000515838	OR4X2	Q8NGF9	303 aa		11.94	□□□□□ -0.5
RBM4-209	ENST00000515838	APH1B	Q8WW43	257 aa		11.94	□□□□□ -0.5
RBM4-209	ENST00000515838	RPE	Q96AT9	228 aa		11.94	□□□□□ -0.5
RBM4-209	ENST00000515838	SMIM19	Q96E16	107 aa		11.94	□□□□□ -0.5
RBM4-209	ENST00000515838	RAB9B	Q9NP90	201 aa		11.94	□□□□□ -0.5
RBM4-209	ENST00000515838	CHCHD3	Q9NX63	227 aa	Known RBP	11.94	□□□□□ -0.5
RBM4-209	ENST00000515838	CKLF	Q9UBR5	152 aa		11.94	□□□□□ -0.5
RBM4-209	ENST00000515838	AASS	Q9UDR5	926 aa		11.94	□□□□□ -0.5
RBM4-209	ENST00000515838	KIF25	Q9UIL4	384 aa		11.94	□□□□□ -0.5
RBM4-209	ENST00000515838	DIMT1	Q9UNQ2	313 aa	Known RBP	11.94	□□□□□ -0.5
RBM4-209	ENST00000515838	ZNF281	Q9Y2X9	895 aa		11.94	□□□□□ -0.5
RBM4-209	ENST00000515838	EXOSC1	Q9Y3B2	195 aa	Known RBP	11.94	□□□□□ -0.5
RBM4-209	ENST00000515838	TRAV24	A0A0B4J272	114 aa		11.93	□□□□□ -0.5
RBM4-209	ENST00000515838	NPIPB11	E5RHQ5	1161 aa		11.93	□□□□□ -0.5
RBM4-209	ENST00000515838		G3V4G9	280 aa		11.93	□□□□□ -0.5
RBM4-209	ENST00000515838	WBP4	O75554	376 aa	Known RBP	11.93	□□□□□ -0.5
RBM4-209	ENST00000515838	CSTB	P04080	98 aa	Known RBP	11.93	□□□□□ -0.5
RBM4-209	ENST00000515838	GZMH	P20718	246 aa		11.93	□□□□□ -0.5
RBM4-209	ENST00000515838	ZNF93	P35789	620 aa	Predicted RBP	11.93	□□□□□ -0.5
RBM4-209	ENST00000515838	GPR176	Q14439	515 aa		11.93	□□□□□ -0.5
RBM4-209	ENST00000515838	MPV17L	Q2QL34	196 aa		11.93	□□□□□ -0.5
RBM4-209	ENST00000515838	RNF144B	Q7Z419	303 aa		11.93	□□□□□ -0.5
RBM4-209	ENST00000515838	CENPV	Q7Z7K6	275 aa	Predicted RBP	11.93	□□□□□ -0.5
RBM4-209	ENST00000515838	SATL1	Q86VE3	508 aa		11.93	□□□□□ -0.5
RBM4-209	ENST00000515838	PACRGL	Q8N7B6	248 aa		11.93	□□□□□ -0.5
RBM4-209	ENST00000515838	OR52N1	Q8NH53	320 aa		11.93	□□□□□ -0.5
RBM4-209	ENST00000515838	THRSP	Q92748	146 aa		11.93	□□□□□ -0.5
RBM4-209	ENST00000515838	TOMM40L	Q969M1	308 aa		11.93	□□□□□ -0.5
RBM4-209	ENST00000515838	FAM192A	Q9GZU8	254 aa		11.93	□□□□□ -0.5
RBM4-209	ENST00000515838	METTL9	Q9H1A3	318 aa		11.93	□□□□□ -0.5
RBM4-209	ENST00000515838	PPIL3	Q9H2H8	161 aa	Known RBP	11.93	□□□□□ -0.5
RBM4-209	ENST00000515838	SPACA1	Q9HBV2	294 aa		11.93	□□□□□ -0.5
RBM4-209	ENST00000515838	BABAM2	Q9NXR7	383 aa		11.93	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms