RNA–Protein interactions for RNA: ENST00000513578.5

RNF4-220, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-220ENST00000513578 KNG1P01042 644 aa7.08□□□□□ -1.28
RNF4-220ENST00000513578 ADH4P08319 380 aa7.08□□□□□ -1.28
RNF4-220ENST00000513578 AKR1C4P17516 323 aa7.08□□□□□ -1.28
RNF4-220ENST00000513578 GATA4P43694 442 aa7.08□□□□□ -1.28
RNF4-220ENST00000513578 NPY4RP50391 375 aa7.08□□□□□ -1.28
RNF4-220ENST00000513578 H2BFSP57053 126 aa7.08□□□□□ -1.28
RNF4-220ENST00000513578 KLF3P57682 345 aaPredicted RBP7.08□□□□□ -1.28
RNF4-220ENST00000513578 SUPT4H1P63272 117 aaKnown RBP7.08□□□□□ -1.28
RNF4-220ENST00000513578 FGL1Q08830 312 aa7.08□□□□□ -1.28
RNF4-220ENST00000513578 MSMPQ1L6U9 139 aa7.08□□□□□ -1.28
RNF4-220ENST00000513578 LIN54Q6MZP7 749 aa7.08□□□□□ -1.28
RNF4-220ENST00000513578 BRICD5Q6PL45 260 aa7.08□□□□□ -1.28
RNF4-220ENST00000513578 WDR82Q6UXN9 313 aa7.08□□□□□ -1.28
RNF4-220ENST00000513578 UNQ6494/PRO21346Q6UXR6 183 aa7.08□□□□□ -1.28
RNF4-220ENST00000513578 C17orf107Q6ZR85 190 aa7.08□□□□□ -1.28
RNF4-220ENST00000513578 SLC38A6Q8IZM9 456 aa7.08□□□□□ -1.28
RNF4-220ENST00000513578 ASCC1Q8N9N2 400 aaKnown RBP7.08□□□□□ -1.28
RNF4-220ENST00000513578 OR4A4PQ8NGN8 299 aa7.08□□□□□ -1.28
RNF4-220ENST00000513578 LILRB1Q8NHL6 650 aaPredicted RBP7.08□□□□□ -1.28
RNF4-220ENST00000513578 COQ8AQ8NI60 647 aa7.08□□□□□ -1.28
RNF4-220ENST00000513578 ERGIC1Q969X5 290 aa7.08□□□□□ -1.28
RNF4-220ENST00000513578 GALNT14Q96FL9 552 aa7.08□□□□□ -1.28
RNF4-220ENST00000513578 ZNF488Q96MN9 340 aa7.08□□□□□ -1.28
RNF4-220ENST00000513578 TMEM246Q9BRR3 403 aa7.08□□□□□ -1.28
RNF4-220ENST00000513578 CABLES2Q9BTV7 478 aa7.08□□□□□ -1.28
RNF4-220ENST00000513578 RSRP1Q9BUV0 290 aa7.08□□□□□ -1.28
RNF4-220ENST00000513578 WDR13Q9H1Z4 485 aa7.08□□□□□ -1.28
RNF4-220ENST00000513578 CLEC4MQ9H2X3 399 aaPredicted RBP7.08□□□□□ -1.28
RNF4-220ENST00000513578 LIME1Q9H400 295 aa7.08□□□□□ -1.28
RNF4-220ENST00000513578 CHMP1AQ9HD42 196 aaPredicted RBP7.08□□□□□ -1.28
RNF4-220ENST00000513578 RAB18Q9NP72 206 aa7.08□□□□□ -1.28
RNF4-220ENST00000513578 NGBQ9NPG2 151 aa7.08□□□□□ -1.28
RNF4-220ENST00000513578 IL36RNQ9UBH0 155 aa7.08□□□□□ -1.28
RNF4-220ENST00000513578 SLC23A1Q9UHI7 598 aa7.08□□□□□ -1.28
RNF4-220ENST00000513578 GLS2Q9UI32 602 aa7.08□□□□□ -1.28
RNF4-220ENST00000513578 PCDHB10Q9UN67 800 aa7.08□□□□□ -1.28
RNF4-220ENST00000513578 WIPI2Q9Y4P8 454 aa7.08□□□□□ -1.28
RNF4-220ENST00000513578 CRYM-AS1A6NIL9 109 aa7.07□□□□□ -1.28
RNF4-220ENST00000513578 RFPL4AA6NLU0 287 aa7.07□□□□□ -1.28
RNF4-220ENST00000513578 RFPL4AL1F8VTS6 287 aa7.07□□□□□ -1.28
RNF4-220ENST00000513578 NXPH2O95156 264 aa7.07□□□□□ -1.28
RNF4-220ENST00000513578 OR2H2O95918 312 aa7.07□□□□□ -1.28
RNF4-220ENST00000513578 THBDP07204 575 aa7.07□□□□□ -1.28
RNF4-220ENST00000513578 GRPP07492 148 aa7.07□□□□□ -1.28
RNF4-220ENST00000513578 WNT2P09544 360 aa7.07□□□□□ -1.28
RNF4-220ENST00000513578 ZNF728P0DKX0 622 aa7.07□□□□□ -1.28
RNF4-220ENST00000513578 SLC25A4P12235 298 aa7.07□□□□□ -1.28
RNF4-220ENST00000513578 C4BPBP20851 252 aa7.07□□□□□ -1.28
RNF4-220ENST00000513578 GLRA1P23415 457 aa7.07□□□□□ -1.28
RNF4-220ENST00000513578 FCGR2CP31995 323 aa7.07□□□□□ -1.28
RNF4-220ENST00000513578 ASCL1P50553 236 aa7.07□□□□□ -1.28
RNF4-220ENST00000513578 SELENOVP59797 346 aa7.07□□□□□ -1.28
RNF4-220ENST00000513578 GMFBP60983 142 aa7.07□□□□□ -1.28
RNF4-220ENST00000513578 RND3P61587 244 aa7.07□□□□□ -1.28
RNF4-220ENST00000513578 CYCSP99999 105 aaKnown RBP7.07□□□□□ -1.28
RNF4-220ENST00000513578 PDCD1Q15116 288 aa7.07□□□□□ -1.28
RNF4-220ENST00000513578 LGALSLQ3ZCW2 172 aaPredicted RBP7.07□□□□□ -1.28
RNF4-220ENST00000513578 Q5BKY6 102 aa7.07□□□□□ -1.28
RNF4-220ENST00000513578 DCAF12L2Q5VW00 463 aa7.07□□□□□ -1.28
RNF4-220ENST00000513578 SLC35E4Q6ICL7 350 aa7.07□□□□□ -1.28
RNF4-220ENST00000513578 TMEM65Q6PI78 240 aa7.07□□□□□ -1.28
RNF4-220ENST00000513578 CLEC18BQ6UXF7 455 aa7.07□□□□□ -1.28
RNF4-220ENST00000513578 ACP7Q6ZNF0 438 aa7.07□□□□□ -1.28
RNF4-220ENST00000513578 ZNF497Q6ZNH5 498 aa7.07□□□□□ -1.28
RNF4-220ENST00000513578 C22orf34Q6ZV56 151 aa7.07□□□□□ -1.28
RNF4-220ENST00000513578 FAM185AQ8N0U4 392 aa7.07□□□□□ -1.28
RNF4-220ENST00000513578 LRTM2Q8N967 370 aa7.07□□□□□ -1.28
RNF4-220ENST00000513578 ZCCHC14Q8WYQ9 949 aaKnown RBP7.07□□□□□ -1.28
RNF4-220ENST00000513578 DYRK2Q92630 601 aa7.07□□□□□ -1.28
RNF4-220ENST00000513578 MRPL24Q96A35 216 aaKnown RBP7.07□□□□□ -1.28
RNF4-220ENST00000513578 DIRC2Q96SL1 478 aa7.07□□□□□ -1.28
RNF4-220ENST00000513578 VRK1Q99986 396 aaPredicted RBP7.07□□□□□ -1.28
RNF4-220ENST00000513578 FXYD6Q9H0Q3 95 aa7.07□□□□□ -1.28
RNF4-220ENST00000513578 TMEM165Q9HC07 324 aa7.07□□□□□ -1.28
RNF4-220ENST00000513578 PLSCR3Q9NRY6 295 aa7.07□□□□□ -1.28
RNF4-220ENST00000513578 MBNL3Q9NUK0 354 aaKnown RBP7.07□□□□□ -1.28
RNF4-220ENST00000513578 ZDHHC8Q9ULC8 765 aa7.07□□□□□ -1.28
RNF4-220ENST00000513578 HSPB11Q9Y547 144 aa7.07□□□□□ -1.28
RNF4-220ENST00000513578 TRBV6-7A0A0A0MS04 114 aa7.06□□□□□ -1.28
RNF4-220ENST00000513578 FAM221AA4D161 298 aa7.06□□□□□ -1.28
RNF4-220ENST00000513578 DPRXA6NFQ7 191 aa7.06□□□□□ -1.28
RNF4-220ENST00000513578 SRRM5B3KS81 715 aa7.06□□□□□ -1.28
RNF4-220ENST00000513578 ATP6V1G2-DDX39BF2Z307 99 aa7.06□□□□□ -1.28
RNF4-220ENST00000513578 HAND1O96004 215 aa7.06□□□□□ -1.28
RNF4-220ENST00000513578 PPYP01298 95 aa7.06□□□□□ -1.28
RNF4-220ENST00000513578 TK1P04183 234 aa7.06□□□□□ -1.28
RNF4-220ENST00000513578 CD55P08174 381 aa7.06□□□□□ -1.28
RNF4-220ENST00000513578 PGAM2P15259 253 aa7.06□□□□□ -1.28
RNF4-220ENST00000513578 ZNF44P15621 663 aa7.06□□□□□ -1.28
RNF4-220ENST00000513578 NFYAP23511 347 aaPredicted RBP7.06□□□□□ -1.28
RNF4-220ENST00000513578 VAMP1P23763 118 aa7.06□□□□□ -1.28
RNF4-220ENST00000513578 DUSP1P28562 367 aa7.06□□□□□ -1.28
RNF4-220ENST00000513578 HERV-K104P61576 105 aa7.06□□□□□ -1.28
RNF4-220ENST00000513578 HLA-DRB3P79483 266 aa7.06□□□□□ -1.28
RNF4-220ENST00000513578 HMGN3Q15651 99 aa7.06□□□□□ -1.28
RNF4-220ENST00000513578 NDUFA5Q16718 116 aa7.06□□□□□ -1.28
RNF4-220ENST00000513578 SMIM21Q3B7S5 101 aa7.06□□□□□ -1.28
RNF4-220ENST00000513578 PAN3Q58A45 887 aaKnown RBP7.06□□□□□ -1.28
RNF4-220ENST00000513578 PCSK4Q6UW60 755 aa7.06□□□□□ -1.28
RNF4-220ENST00000513578 ZNF767PQ75MW2 155 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms