RNA–Protein interactions for RNA: ENST00000510737.1

USP53-206, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 5

Gene USP53, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-206ENST00000510737 CCL3L1P16619 93 aa4.45□□□□□ -1.7
USP53-206ENST00000510737 AQP2P41181 271 aa4.45□□□□□ -1.7
USP53-206ENST00000510737 GUCA1AP43080 201 aaPredicted RBP4.45□□□□□ -1.7
USP53-206ENST00000510737 CDX1P47902 265 aaPredicted RBP4.45□□□□□ -1.7
USP53-206ENST00000510737 CAV3P56539 151 aa4.45□□□□□ -1.7
USP53-206ENST00000510737 EMX2Q04743 252 aa4.45□□□□□ -1.7
USP53-206ENST00000510737 SLC34A1Q06495 639 aa4.45□□□□□ -1.7
USP53-206ENST00000510737 SCRN3Q0VDG4 424 aa4.45□□□□□ -1.7
USP53-206ENST00000510737 SPANXN4Q5MJ08 99 aa4.45□□□□□ -1.7
USP53-206ENST00000510737 ZNF770Q6IQ21 691 aaPredicted RBP4.45□□□□□ -1.7
USP53-206ENST00000510737 PLBD1Q6P4A8 553 aa4.45□□□□□ -1.7
USP53-206ENST00000510737 CEMP1Q6PRD7 247 aaPredicted RBP4.45□□□□□ -1.7
USP53-206ENST00000510737 WDR82Q6UXN9 313 aa4.45□□□□□ -1.7
USP53-206ENST00000510737 DHDDSQ86SQ9 333 aa4.45□□□□□ -1.7
USP53-206ENST00000510737 LCA5Q86VQ0 697 aa4.45□□□□□ -1.7
USP53-206ENST00000510737 ZNRF1Q8ND25 227 aa4.45□□□□□ -1.7
USP53-206ENST00000510737 ANGPTL6Q8NI99 470 aa4.45□□□□□ -1.7
USP53-206ENST00000510737 SPRYD4Q8WW59 207 aaPredicted RBP4.45□□□□□ -1.7
USP53-206ENST00000510737 HIST1H2ACQ93077 130 aa4.45□□□□□ -1.7
USP53-206ENST00000510737 C12orf43Q96C57 262 aaKnown RBP4.45□□□□□ -1.7
USP53-206ENST00000510737 RBM14Q96PK6 669 aaKnown RBP4.45□□□□□ -1.7
USP53-206ENST00000510737 RBP7Q96R05 134 aa4.45□□□□□ -1.7
USP53-206ENST00000510737 ADAT1Q9BUB4 502 aaKnown RBP4.45□□□□□ -1.7
USP53-206ENST00000510737 HAO2Q9NYQ3 351 aa4.45□□□□□ -1.7
USP53-206ENST00000510737 BTNL2Q9UIR0 455 aa4.45□□□□□ -1.7
USP53-206ENST00000510737 ZNF229Q9UJW7 825 aa4.45□□□□□ -1.7
USP53-206ENST00000510737 KPNA4O00629 521 aaPredicted RBP4.44□□□□□ -1.7
USP53-206ENST00000510737 RER1O15258 196 aa4.44□□□□□ -1.7
USP53-206ENST00000510737 SIGLEC5O15389 551 aa4.44□□□□□ -1.7
USP53-206ENST00000510737 GCAP28676 217 aa4.44□□□□□ -1.7
USP53-206ENST00000510737 PHBP35232 272 aa4.44□□□□□ -1.7
USP53-206ENST00000510737 DAP3P51398 398 aaKnown RBP4.44□□□□□ -1.7
USP53-206ENST00000510737 OR12D2P58182 307 aa4.44□□□□□ -1.7
USP53-206ENST00000510737 GMFBP60983 142 aa4.44□□□□□ -1.7
USP53-206ENST00000510737 CAV1Q03135 178 aa4.44□□□□□ -1.7
USP53-206ENST00000510737 RBMY1FQ15415 496 aaKnown RBP4.44□□□□□ -1.7
USP53-206ENST00000510737 ACP7Q6ZNF0 438 aa4.44□□□□□ -1.7
USP53-206ENST00000510737 LINC00336Q6ZUF6 198 aa4.44□□□□□ -1.7
USP53-206ENST00000510737 PGAP1Q75T13 922 aa4.44□□□□□ -1.7
USP53-206ENST00000510737 C10orf107Q8IVU9 208 aa4.44□□□□□ -1.7
USP53-206ENST00000510737 OR11H1Q8NG94 326 aa4.44□□□□□ -1.7
USP53-206ENST00000510737 OR11H6Q8NGC7 330 aa4.44□□□□□ -1.7
USP53-206ENST00000510737 SLAMF9Q96A28 289 aa4.44□□□□□ -1.7
USP53-206ENST00000510737 AKR1E2Q96JD6 320 aa4.44□□□□□ -1.7
USP53-206ENST00000510737 RAB3IPQ96QF0 476 aaPredicted RBP4.44□□□□□ -1.7
USP53-206ENST00000510737 PANX1Q96RD7 426 aa4.44□□□□□ -1.7
USP53-206ENST00000510737 SLC22A4Q9H015 551 aa4.44□□□□□ -1.7
USP53-206ENST00000510737 DNTTIP1Q9H147 329 aa4.44□□□□□ -1.7
USP53-206ENST00000510737 BCL2L10Q9HD36 194 aa4.44□□□□□ -1.7
USP53-206ENST00000510737 MEPEQ9NQ76 525 aaPredicted RBP4.44□□□□□ -1.7
USP53-206ENST00000510737 INIPQ9NRY2 104 aa4.44□□□□□ -1.7
USP53-206ENST00000510737 DCDC2Q9UHG0 476 aa4.44□□□□□ -1.7
USP53-206ENST00000510737 ANGPT4Q9Y264 503 aa4.44□□□□□ -1.7
USP53-206ENST00000510737 SORL1Q92673 2214 aa4.44□□□□□ -1.7
USP53-206ENST00000510737 C17orf98A8MV24 154 aa4.43□□□□□ -1.7
USP53-206ENST00000510737 CDIPTO14735 213 aa4.43□□□□□ -1.7
USP53-206ENST00000510737 OR2F2O95006 317 aa4.43□□□□□ -1.7
USP53-206ENST00000510737 TSPAN19P0C672 248 aa4.43□□□□□ -1.7
USP53-206ENST00000510737 IGHV1-8P0DP01 117 aa4.43□□□□□ -1.7
USP53-206ENST00000510737 UMPSP11172 480 aa4.43□□□□□ -1.7
USP53-206ENST00000510737 CPA3P15088 417 aa4.43□□□□□ -1.7
USP53-206ENST00000510737 CTLA4P16410 223 aa4.43□□□□□ -1.7
USP53-206ENST00000510737 ZNF823P16415 610 aa4.43□□□□□ -1.7
USP53-206ENST00000510737 TCP1P17987 556 aaKnown RBP4.43□□□□□ -1.7
USP53-206ENST00000510737 FUT1P19526 365 aa4.43□□□□□ -1.7
USP53-206ENST00000510737 POU3F4P49335 361 aa4.43□□□□□ -1.7
USP53-206ENST00000510737 DLX6P56179 175 aa4.43□□□□□ -1.7
USP53-206ENST00000510737 DSTNP60981 165 aa4.43□□□□□ -1.7
USP53-206ENST00000510737 EWSR1Q01844 656 aaKnown RBP eCLIP4.43□□□□□ -1.7
USP53-206ENST00000510737 SRSF9Q13242 221 aaKnown RBP eCLIP4.43□□□□□ -1.7
USP53-206ENST00000510737 TTC33Q6PID6 262 aaPredicted RBP4.43□□□□□ -1.7
USP53-206ENST00000510737 LINC00322Q6ZN03 302 aaPredicted RBP4.43□□□□□ -1.7
USP53-206ENST00000510737 NANOGNBQ7Z5D8 188 aa4.43□□□□□ -1.7
USP53-206ENST00000510737 LYPD6Q86Y78 171 aa4.43□□□□□ -1.7
USP53-206ENST00000510737 FAM89BQ8N5H3 189 aa4.43□□□□□ -1.7
USP53-206ENST00000510737 COMMD1Q8N668 190 aa4.43□□□□□ -1.7
USP53-206ENST00000510737 DRAM1Q8N682 238 aa4.43□□□□□ -1.7
USP53-206ENST00000510737 TRIML2Q8N7C3 387 aa4.43□□□□□ -1.7
USP53-206ENST00000510737 CSNK1G2-AS1Q8NCQ2 148 aa4.43□□□□□ -1.7
USP53-206ENST00000510737 OR1M1Q8NGA1 313 aa4.43□□□□□ -1.7
USP53-206ENST00000510737 AGR3Q8TD06 166 aa4.43□□□□□ -1.7
USP53-206ENST00000510737 DCUN1D4Q92564 292 aa4.43□□□□□ -1.7
USP53-206ENST00000510737 STMN2Q93045 179 aa4.43□□□□□ -1.7
USP53-206ENST00000510737 MAL2Q969L2 176 aa4.43□□□□□ -1.7
USP53-206ENST00000510737 TESCQ96BS2 214 aa4.43□□□□□ -1.7
USP53-206ENST00000510737 ALG12Q9BV10 488 aa4.43□□□□□ -1.7
USP53-206ENST00000510737 ISYNA1Q9NPH2 558 aa4.43□□□□□ -1.7
USP53-206ENST00000510737 ZNF581Q9P0T4 197 aa4.43□□□□□ -1.7
USP53-206ENST00000510737 HHLA2Q9UM44 414 aa4.43□□□□□ -1.7
USP53-206ENST00000510737 DNAH5Q8TE73 4624 aa4.42□□□□□ -1.7
USP53-206ENST00000510737 IGKV1D-17A0A075B6S4 117 aa4.42□□□□□ -1.7
USP53-206ENST00000510737 A0A1W2PPM1 405 aa4.42□□□□□ -1.7
USP53-206ENST00000510737 GMNCA6NCL1 334 aa4.42□□□□□ -1.7
USP53-206ENST00000510737 NUPR2A6NF83 97 aa4.42□□□□□ -1.7
USP53-206ENST00000510737 SERPINE3A8MV23 424 aa4.42□□□□□ -1.7
USP53-206ENST00000510737 C12orf77C9JDV5 145 aa4.42□□□□□ -1.7
USP53-206ENST00000510737 PLIN3O60664 434 aa4.42□□□□□ -1.7
USP53-206ENST00000510737 SAP30O75446 220 aa4.42□□□□□ -1.7
USP53-206ENST00000510737 KRT75O95678 551 aa4.42□□□□□ -1.7
USP53-206ENST00000510737 ACSM4P0C7M7 580 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms