RNA–Protein interactions for RNA: ENST00000509637.6

RAB40C-202, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-202ENST00000509637 NPIPB11E5RHQ5 1161 aa12.51□□□□□ -0.41
RAB40C-202ENST00000509637 E9PI62 339 aa12.51□□□□□ -0.41
RAB40C-202ENST00000509637 DEGS1O15121 323 aa12.51□□□□□ -0.41
RAB40C-202ENST00000509637 MYCNOSP40205 109 aa12.51□□□□□ -0.41
RAB40C-202ENST00000509637 PRRX1P54821 245 aa12.51□□□□□ -0.41
RAB40C-202ENST00000509637 LTC4SQ16873 150 aa12.51□□□□□ -0.41
RAB40C-202ENST00000509637 DNAL1Q4LDG9 190 aa12.51□□□□□ -0.41
RAB40C-202ENST00000509637 OR4D6Q8NGJ1 314 aa12.51□□□□□ -0.41
RAB40C-202ENST00000509637 OR8J1Q8NGP2 316 aa12.51□□□□□ -0.41
RAB40C-202ENST00000509637 SPSB1Q96BD6 273 aa12.51□□□□□ -0.41
RAB40C-202ENST00000509637 HRASLS5Q96KN8 279 aa12.51□□□□□ -0.41
RAB40C-202ENST00000509637 OSBPL10Q9BXB5 764 aa12.51□□□□□ -0.41
RAB40C-202ENST00000509637 RIBC2Q9H4K1 309 aa12.51□□□□□ -0.41
RAB40C-202ENST00000509637 CALYQ9NYX4 217 aa12.51□□□□□ -0.41
RAB40C-202ENST00000509637 IGHV3-72A0A0B4J1Y9 119 aa12.5□□□□□ -0.41
RAB40C-202ENST00000509637 CYB5AP00167 134 aa12.5□□□□□ -0.41
RAB40C-202ENST00000509637 IGHG2P01859 326 aa12.5□□□□□ -0.41
RAB40C-202ENST00000509637 ZNF20P17024 532 aa12.5□□□□□ -0.41
RAB40C-202ENST00000509637 CEACAM3P40198 252 aa12.5□□□□□ -0.41
RAB40C-202ENST00000509637 LUMP51884 338 aaPredicted RBP12.5□□□□□ -0.41
RAB40C-202ENST00000509637 DEFB136Q30KP8 78 aa12.5□□□□□ -0.41
RAB40C-202ENST00000509637 RSBN1Q5VWQ0 802 aaPredicted RBP12.5□□□□□ -0.41
RAB40C-202ENST00000509637 SAXO1Q8IYX7 474 aa12.5□□□□□ -0.41
RAB40C-202ENST00000509637 Q8N6K4 173 aa12.5□□□□□ -0.41
RAB40C-202ENST00000509637 KLHL30-AS1Q8NEE0 82 aa12.5□□□□□ -0.41
RAB40C-202ENST00000509637 TOMM40LQ969M1 308 aa12.5□□□□□ -0.41
RAB40C-202ENST00000509637 RPEQ96AT9 228 aa12.5□□□□□ -0.41
RAB40C-202ENST00000509637 PRR25Q96S07 402 aa12.5□□□□□ -0.41
RAB40C-202ENST00000509637 ISG20L2Q9H9L3 353 aaKnown RBP12.5□□□□□ -0.41
RAB40C-202ENST00000509637 PLSCR3Q9NRY6 295 aa12.5□□□□□ -0.41
RAB40C-202ENST00000509637 IDI2-AS1Q9NZ38 188 aa12.5□□□□□ -0.41
RAB40C-202ENST00000509637 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.5□□□□□ -0.41
RAB40C-202ENST00000509637 GLS2Q9UI32 602 aa12.5□□□□□ -0.41
RAB40C-202ENST00000509637 SCOCQ9UIL1 159 aa12.5□□□□□ -0.41
RAB40C-202ENST00000509637 PCDHGB5Q9Y5G0 923 aa12.5□□□□□ -0.41
RAB40C-202ENST00000509637 H0YJX3 145 aa12.49□□□□□ -0.41
RAB40C-202ENST00000509637 M0QZK8 103 aa12.49□□□□□ -0.41
RAB40C-202ENST00000509637 SLC16A6O15403 523 aa12.49□□□□□ -0.41
RAB40C-202ENST00000509637 IGKV1D-33P01593 117 aa12.49□□□□□ -0.41
RAB40C-202ENST00000509637 IGKV1-33P01594 117 aa12.49□□□□□ -0.41
RAB40C-202ENST00000509637 RPLP1P05386 114 aaKnown RBP12.49□□□□□ -0.41
RAB40C-202ENST00000509637 FAM106CPP0CH98 169 aa12.49□□□□□ -0.41
RAB40C-202ENST00000509637 SSTR5P35346 364 aa12.49□□□□□ -0.41
RAB40C-202ENST00000509637 GLP1RP43220 463 aa12.49□□□□□ -0.41
RAB40C-202ENST00000509637 GNG10P50151 68 aa12.49□□□□□ -0.41
RAB40C-202ENST00000509637 CCR9P51686 369 aa12.49□□□□□ -0.41
RAB40C-202ENST00000509637 ALKBH1Q13686 389 aaKnown RBP12.49□□□□□ -0.41
RAB40C-202ENST00000509637 EBI3Q14213 229 aa12.49□□□□□ -0.41
RAB40C-202ENST00000509637 ZSCAN26Q16670 478 aa12.49□□□□□ -0.41
RAB40C-202ENST00000509637 ZDHHC13Q8IUH4 622 aa12.49□□□□□ -0.41
RAB40C-202ENST00000509637 STPG2Q8N412 459 aa12.49□□□□□ -0.41
RAB40C-202ENST00000509637 OR51A2Q8NGJ7 313 aa12.49□□□□□ -0.41
RAB40C-202ENST00000509637 OR13C3Q8NGS6 347 aa12.49□□□□□ -0.41
RAB40C-202ENST00000509637 OR10K1Q8NGX5 313 aa12.49□□□□□ -0.41
RAB40C-202ENST00000509637 UBALD1Q8TB05 177 aa12.49□□□□□ -0.41
RAB40C-202ENST00000509637 MRGPRDQ8TDS7 321 aa12.49□□□□□ -0.41
RAB40C-202ENST00000509637 RNFT2Q96EX2 444 aa12.49□□□□□ -0.41
RAB40C-202ENST00000509637 NR1H4Q96RI1 486 aaPredicted RBP12.49□□□□□ -0.41
RAB40C-202ENST00000509637 ZCCHC4Q9H5U6 513 aa12.49□□□□□ -0.41
RAB40C-202ENST00000509637 OAZ3Q9UMX2 235 aa12.49□□□□□ -0.41
RAB40C-202ENST00000509637 FUOMA2VDF0 154 aa12.48□□□□□ -0.41
RAB40C-202ENST00000509637 SERPINE3A8MV23 424 aa12.48□□□□□ -0.41
RAB40C-202ENST00000509637 ZNF736B4DX44 427 aaPredicted RBP12.48□□□□□ -0.41
RAB40C-202ENST00000509637 H3BUI4 141 aa12.48□□□□□ -0.41
RAB40C-202ENST00000509637 J3QLW9 94 aa12.48□□□□□ -0.41
RAB40C-202ENST00000509637 IL1AP01583 271 aa12.48□□□□□ -0.41
RAB40C-202ENST00000509637 TMEM225BP0DP42 221 aa12.48□□□□□ -0.41
RAB40C-202ENST00000509637 ZNF19P17023 458 aa12.48□□□□□ -0.41
RAB40C-202ENST00000509637 TMEM11P17152 192 aa12.48□□□□□ -0.41
RAB40C-202ENST00000509637 FASP25445 335 aa12.48□□□□□ -0.41
RAB40C-202ENST00000509637 ATP6V1E1P36543 226 aa12.48□□□□□ -0.41
RAB40C-202ENST00000509637 MNDAP41218 407 aa12.48□□□□□ -0.41
RAB40C-202ENST00000509637 REG1BP48304 166 aa12.48□□□□□ -0.41
RAB40C-202ENST00000509637 TMED1Q13445 227 aa12.48□□□□□ -0.41
RAB40C-202ENST00000509637 KISS1Q15726 138 aa12.48□□□□□ -0.41
RAB40C-202ENST00000509637 PIGYQ3MUY2 71 aa12.48□□□□□ -0.41
RAB40C-202ENST00000509637 LPCAT4Q643R3 524 aa12.48□□□□□ -0.41
RAB40C-202ENST00000509637 Q8N9W7 124 aa12.48□□□□□ -0.41
RAB40C-202ENST00000509637 CHST4Q8NCG5 386 aa12.48□□□□□ -0.41
RAB40C-202ENST00000509637 CNIH3Q8TBE1 160 aa12.48□□□□□ -0.41
RAB40C-202ENST00000509637 CHPT1Q8WUD6 406 aa12.48□□□□□ -0.41
RAB40C-202ENST00000509637 RGP1Q92546 391 aaPredicted RBP12.48□□□□□ -0.41
RAB40C-202ENST00000509637 EAF1Q96JC9 268 aaPredicted RBP12.48□□□□□ -0.41
RAB40C-202ENST00000509637 C4orf36Q96KX1 117 aa12.48□□□□□ -0.41
RAB40C-202ENST00000509637 ASCL2Q99929 193 aa12.48□□□□□ -0.41
RAB40C-202ENST00000509637 DCLRE1BQ9H816 532 aa12.48□□□□□ -0.41
RAB40C-202ENST00000509637 ZFP57Q9NU63 452 aa12.48□□□□□ -0.41
RAB40C-202ENST00000509637 OR6C3Q9NZP0 311 aa12.48□□□□□ -0.41
RAB40C-202ENST00000509637 AP4S1Q9Y587 144 aa12.48□□□□□ -0.41
RAB40C-202ENST00000509637 DYNC2H1Q8NCM8 4307 aaKnown RBP12.47□□□□□ -0.41
RAB40C-202ENST00000509637 MEIKINA0A087WXM9 373 aa12.47□□□□□ -0.41
RAB40C-202ENST00000509637 SAC3D1A6NKF1 404 aa12.47□□□□□ -0.41
RAB40C-202ENST00000509637 NUDT19A8MXV4 375 aa12.47□□□□□ -0.41
RAB40C-202ENST00000509637 CCL24O00175 119 aa12.47□□□□□ -0.41
RAB40C-202ENST00000509637 GABRPO00591 440 aa12.47□□□□□ -0.41
RAB40C-202ENST00000509637 FGF16O43320 207 aa12.47□□□□□ -0.41
RAB40C-202ENST00000509637 ZFPL1O95159 310 aa12.47□□□□□ -0.41
RAB40C-202ENST00000509637 CLIC3O95833 236 aa12.47□□□□□ -0.41
RAB40C-202ENST00000509637 HTR1AP08908 422 aa12.47□□□□□ -0.41
RAB40C-202ENST00000509637 DGCR2P98153 550 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms