RNA–Protein interactions for RNA: ENST00000509601.1

TPM3-220, Transcript of tropomyosin 3, humanhuman

TSL 4

Gene TPM3, Length 543 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-220ENST00000509601 TET2Q6N021 2002 aaPredicted RBP14.4□□□□□ -0.1
TPM3-220ENST00000509601 A0A087X0M5 115 aa14.39□□□□□ -0.11
TPM3-220ENST00000509601 TRBV5-5A0A0J9YX44 114 aa14.39□□□□□ -0.11
TPM3-220ENST00000509601 A0A1B0GX30 115 aa14.39□□□□□ -0.11
TPM3-220ENST00000509601 FAM172BPA6NC97 362 aa14.39□□□□□ -0.11
TPM3-220ENST00000509601 LY6LH3BQJ8 138 aa14.39□□□□□ -0.11
TPM3-220ENST00000509601 CDRT1O95170 752 aa14.39□□□□□ -0.11
TPM3-220ENST00000509601 CD2P06729 351 aa14.39□□□□□ -0.11
TPM3-220ENST00000509601 VSIG10L2P0DP72 767 aa14.39□□□□□ -0.11
TPM3-220ENST00000509601 PTGFRP43088 359 aa14.39□□□□□ -0.11
TPM3-220ENST00000509601 OR3A4PP47883 348 aa14.39□□□□□ -0.11
TPM3-220ENST00000509601 IL13RA2Q14627 380 aa14.39□□□□□ -0.11
TPM3-220ENST00000509601 C2orf68Q2NKX9 166 aa14.39□□□□□ -0.11
TPM3-220ENST00000509601 PIGYQ3MUY2 71 aa14.39□□□□□ -0.11
TPM3-220ENST00000509601 SMIM19Q96E16 107 aa14.39□□□□□ -0.11
TPM3-220ENST00000509601 ZNF581Q9P0T4 197 aa14.39□□□□□ -0.11
TPM3-220ENST00000509601 KBTBD11-OT1A0A1B0GTJ5 212 aa14.38□□□□□ -0.11
TPM3-220ENST00000509601 ZNF729A6NN14 1252 aaPredicted RBP14.38□□□□□ -0.11
TPM3-220ENST00000509601 GPX5O75715 221 aa14.38□□□□□ -0.11
TPM3-220ENST00000509601 HTR3BO95264 441 aa14.38□□□□□ -0.11
TPM3-220ENST00000509601 CSF1P09603 554 aa14.38□□□□□ -0.11
TPM3-220ENST00000509601 IGFBP3P17936 291 aaPredicted RBP14.38□□□□□ -0.11
TPM3-220ENST00000509601 CD24P25063 80 aa14.38□□□□□ -0.11
TPM3-220ENST00000509601 ST3GAL4Q11206 333 aa14.38□□□□□ -0.11
TPM3-220ENST00000509601 RCN1Q15293 331 aa14.38□□□□□ -0.11
TPM3-220ENST00000509601 PDLIM3Q53GG5 364 aaPredicted RBP14.38□□□□□ -0.11
TPM3-220ENST00000509601 PAN3Q58A45 887 aaKnown RBP14.38□□□□□ -0.11
TPM3-220ENST00000509601 SETD9Q8NE22 299 aa14.38□□□□□ -0.11
TPM3-220ENST00000509601 OR13A1Q8NGR1 328 aa14.38□□□□□ -0.11
TPM3-220ENST00000509601 OR52N1Q8NH53 320 aa14.38□□□□□ -0.11
TPM3-220ENST00000509601 PLPPR1Q8TBJ4 325 aa14.38□□□□□ -0.11
TPM3-220ENST00000509601 ZNF596Q8TC21 504 aa14.38□□□□□ -0.11
TPM3-220ENST00000509601 PRSS22Q9GZN4 317 aa14.38□□□□□ -0.11
TPM3-220ENST00000509601 WNT10AQ9GZT5 417 aa14.38□□□□□ -0.11
TPM3-220ENST00000509601 LINC00574Q9H8X3 128 aa14.38□□□□□ -0.11
TPM3-220ENST00000509601 TMEM138Q9NPI0 162 aa14.38□□□□□ -0.11
TPM3-220ENST00000509601 OR6C3Q9NZP0 311 aa14.38□□□□□ -0.11
TPM3-220ENST00000509601 KIF25Q9UIL4 384 aa14.38□□□□□ -0.11
TPM3-220ENST00000509601 ING4Q9UNL4 249 aa14.38□□□□□ -0.11
TPM3-220ENST00000509601 HSPE1-MOB4S4R3N1 261 aa14.38□□□□□ -0.11
TPM3-220ENST00000509601 LEUTXA8MZ59 168 aa14.37□□□□□ -0.11
TPM3-220ENST00000509601 BUB1B-PAK6H3BSN5 160 aa14.37□□□□□ -0.11
TPM3-220ENST00000509601 F2RL2O00254 374 aa14.37□□□□□ -0.11
TPM3-220ENST00000509601 HSPB6O14558 160 aa14.37□□□□□ -0.11
TPM3-220ENST00000509601 GNAO1P09471 354 aa14.37□□□□□ -0.11
TPM3-220ENST00000509601 MYL12AP19105 171 aa14.37□□□□□ -0.11
TPM3-220ENST00000509601 BDKRB2P30411 391 aa14.37□□□□□ -0.11
TPM3-220ENST00000509601 ZNF93P35789 620 aaPredicted RBP14.37□□□□□ -0.11
TPM3-220ENST00000509601 PAX5Q02548 391 aa14.37□□□□□ -0.11
TPM3-220ENST00000509601 DOC2BQ14184 412 aa14.37□□□□□ -0.11
TPM3-220ENST00000509601 RSU1Q15404 277 aa14.37□□□□□ -0.11
TPM3-220ENST00000509601 HLA-DRB5Q30154 266 aa14.37□□□□□ -0.11
TPM3-220ENST00000509601 FBLN7Q53RD9 439 aa14.37□□□□□ -0.11
TPM3-220ENST00000509601 OGFRL1Q5TC84 451 aaPredicted RBP14.37□□□□□ -0.11
TPM3-220ENST00000509601 RSBN1Q5VWQ0 802 aaPredicted RBP14.37□□□□□ -0.11
TPM3-220ENST00000509601 ZFP41Q8N8Y5 198 aa14.37□□□□□ -0.11
TPM3-220ENST00000509601 ZNF565Q8N9K5 539 aa14.37□□□□□ -0.11
TPM3-220ENST00000509601 OR4D6Q8NGJ1 314 aa14.37□□□□□ -0.11
TPM3-220ENST00000509601 FBLIM1Q8WUP2 373 aa14.37□□□□□ -0.11
TPM3-220ENST00000509601 CPNE2Q96FN4 548 aaPredicted RBP14.37□□□□□ -0.11
TPM3-220ENST00000509601 KIRREL1Q96J84 757 aa14.37□□□□□ -0.11
TPM3-220ENST00000509601 PGLYRP3Q96LB9 341 aa14.37□□□□□ -0.11
TPM3-220ENST00000509601 OCSTAMPQ9BR26 566 aa14.37□□□□□ -0.11
TPM3-220ENST00000509601 BARHL1Q9BZE3 327 aa14.37□□□□□ -0.11
TPM3-220ENST00000509601 IL36GQ9NZH8 169 aa14.37□□□□□ -0.11
TPM3-220ENST00000509601 TGP01266 2768 aa14.37□□□□□ -0.11
TPM3-220ENST00000509601 DNAH3Q8TD57 4116 aa14.36□□□□□ -0.11
TPM3-220ENST00000509601 MEIKINA0A087WXM9 373 aa14.36□□□□□ -0.11
TPM3-220ENST00000509601 NPIPB11E5RHQ5 1161 aa14.36□□□□□ -0.11
TPM3-220ENST00000509601 CASQ2O14958 399 aaPredicted RBP14.36□□□□□ -0.11
TPM3-220ENST00000509601 XPNPEP2O43895 674 aa14.36□□□□□ -0.11
TPM3-220ENST00000509601 CD28P10747 220 aa14.36□□□□□ -0.11
TPM3-220ENST00000509601 CAPGP40121 348 aa14.36□□□□□ -0.11
TPM3-220ENST00000509601 NHLRC3Q5JS37 347 aa14.36□□□□□ -0.11
TPM3-220ENST00000509601 DDI2Q5TDH0 399 aa14.36□□□□□ -0.11
TPM3-220ENST00000509601 FAM192AQ9GZU8 254 aa14.36□□□□□ -0.11
TPM3-220ENST00000509601 METTL9Q9H1A3 318 aa14.36□□□□□ -0.11
TPM3-220ENST00000509601 IFT22Q9H7X7 185 aa14.36□□□□□ -0.11
TPM3-220ENST00000509601 CHCHD3Q9NX63 227 aaKnown RBP14.36□□□□□ -0.11
TPM3-220ENST00000509601 PSORS1C1Q9UIG5 152 aa14.36□□□□□ -0.11
TPM3-220ENST00000509601 ST3GAL6Q9Y274 331 aa14.36□□□□□ -0.11
TPM3-220ENST00000509601 NOTCH3Q9UM47 2321 aa14.36□□□□□ -0.11
TPM3-220ENST00000509601 TRBV5-7A0A0A0MS05 114 aa14.35□□□□□ -0.11
TPM3-220ENST00000509601 TRAV39A0A0B4J263 110 aa14.35□□□□□ -0.11
TPM3-220ENST00000509601 MAGEA13PA6NCF6 341 aa14.35□□□□□ -0.11
TPM3-220ENST00000509601 TOR1AO14656 332 aa14.35□□□□□ -0.11
TPM3-220ENST00000509601 NFYBP25208 207 aa14.35□□□□□ -0.11
TPM3-220ENST00000509601 C21orf33P30042 268 aaPredicted RBP14.35□□□□□ -0.11
TPM3-220ENST00000509601 PRRX1P54821 245 aa14.35□□□□□ -0.11
TPM3-220ENST00000509601 Q499Y3 187 aa14.35□□□□□ -0.11
TPM3-220ENST00000509601 YIF1BQ5BJH7 314 aa14.35□□□□□ -0.11
TPM3-220ENST00000509601 TPTE2P1Q5T6R2 138 aa14.35□□□□□ -0.11
TPM3-220ENST00000509601 OSR2Q8N2R0 312 aa14.35□□□□□ -0.11
TPM3-220ENST00000509601 SUMF2Q8NBJ7 301 aa14.35□□□□□ -0.11
TPM3-220ENST00000509601 RFESDQ8TAC1 157 aa14.35□□□□□ -0.11
TPM3-220ENST00000509601 PLCXD1Q9NUJ7 323 aa14.35□□□□□ -0.11
TPM3-220ENST00000509601 CALYQ9NYX4 217 aa14.35□□□□□ -0.11
TPM3-220ENST00000509601 TRAV8-7A0A075B6U6 113 aa14.34□□□□□ -0.11
TPM3-220ENST00000509601 A0A1W2PP11 408 aa14.34□□□□□ -0.11
TPM3-220ENST00000509601 A0A1W2PPK0 400 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms