RNA–Protein interactions for RNA: ENST00000509093.5

COPS4-206, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 2 BASIC

Gene COPS4, Length 2,273 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-206ENST00000509093 KLHL13Q9P2N7 655 aa9.71□□□□□ -0.86
COPS4-206ENST00000509093 FOXD3Q9UJU5 478 aaPredicted RBP9.71□□□□□ -0.86
COPS4-206ENST00000509093 PITPNC1Q9UKF7 332 aa9.71□□□□□ -0.86
COPS4-206ENST00000509093 NPIPA1Q9UND3 350 aa9.71□□□□□ -0.86
COPS4-206ENST00000509093 MRPS28Q9Y2Q9 187 aaKnown RBP9.71□□□□□ -0.86
COPS4-206ENST00000509093 MPZL1O95297 269 aa9.7□□□□□ -0.86
COPS4-206ENST00000509093 OR5H8P0DN80 308 aa9.7□□□□□ -0.86
COPS4-206ENST00000509093 GZMBP10144 247 aa9.7□□□□□ -0.86
COPS4-206ENST00000509093 GDF1P27539 372 aa9.7□□□□□ -0.86
COPS4-206ENST00000509093 MMP16P51512 607 aa9.7□□□□□ -0.86
COPS4-206ENST00000509093 SNU13P55769 128 aaKnown RBP9.7□□□□□ -0.86
COPS4-206ENST00000509093 BIDP55957 195 aa9.7□□□□□ -0.86
COPS4-206ENST00000509093 TMEM50BP56557 158 aa9.7□□□□□ -0.86
COPS4-206ENST00000509093 HNF4GQ14541 408 aa9.7□□□□□ -0.86
COPS4-206ENST00000509093 RTP5Q14D33 572 aa9.7□□□□□ -0.86
COPS4-206ENST00000509093 HAGHQ16775 308 aa9.7□□□□□ -0.86
COPS4-206ENST00000509093 TMEM183AQ8IXX5 376 aa9.7□□□□□ -0.86
COPS4-206ENST00000509093 ZNF664Q8N3J9 261 aa9.7□□□□□ -0.86
COPS4-206ENST00000509093 ARHGAP5-AS1Q96IT6 56 aa9.7□□□□□ -0.86
COPS4-206ENST00000509093 C1orf147Q96MC9 270 aaPredicted RBP9.7□□□□□ -0.86
COPS4-206ENST00000509093 SRXN1Q9BYN0 137 aa9.7□□□□□ -0.86
COPS4-206ENST00000509093 ABI3Q9P2A4 366 aa9.7□□□□□ -0.86
COPS4-206ENST00000509093 COA3Q9Y2R0 106 aaPredicted RBP9.7□□□□□ -0.86
COPS4-206ENST00000509093 A0A1W2PNV4 684 aa9.7□□□□□ -0.86
COPS4-206ENST00000509093 MED19A0JLT2 244 aaPredicted RBP9.7□□□□□ -0.86
COPS4-206ENST00000509093 CRYM-AS1A6NIL9 109 aa9.7□□□□□ -0.86
COPS4-206ENST00000509093 FAM166BA8MTA8 275 aa9.7□□□□□ -0.86
COPS4-206ENST00000509093 B4DEV8 164 aa9.7□□□□□ -0.86
COPS4-206ENST00000509093 TTRP02766 147 aa9.7□□□□□ -0.86
COPS4-206ENST00000509093 HSPB1P04792 205 aaKnown RBP9.7□□□□□ -0.86
COPS4-206ENST00000509093 CTSDP07339 412 aaPredicted RBP9.7□□□□□ -0.86
COPS4-206ENST00000509093 H2BFMP0C1H6 154 aa9.7□□□□□ -0.86
COPS4-206ENST00000509093 ZNF823P16415 610 aa9.7□□□□□ -0.86
COPS4-206ENST00000509093 CCL11P51671 97 aa9.7□□□□□ -0.86
COPS4-206ENST00000509093 RND3P61587 244 aa9.7□□□□□ -0.86
COPS4-206ENST00000509093 SLC10A1Q14973 349 aa9.7□□□□□ -0.86
COPS4-206ENST00000509093 SPSB3Q6PJ21 355 aa9.7□□□□□ -0.86
COPS4-206ENST00000509093 MDS2Q8NDY4 140 aa9.7□□□□□ -0.86
COPS4-206ENST00000509093 KCNK17Q96T54 332 aa9.7□□□□□ -0.86
COPS4-206ENST00000509093 FAM173AQ9BQD7 235 aa9.7□□□□□ -0.86
COPS4-206ENST00000509093 ZNF552Q9H707 407 aaPredicted RBP9.7□□□□□ -0.86
COPS4-206ENST00000509093 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.7□□□□□ -0.86
COPS4-206ENST00000509093 FAM206AQ9NX38 181 aa9.7□□□□□ -0.86
COPS4-206ENST00000509093 CBY1Q9Y3M2 126 aa9.7□□□□□ -0.86
COPS4-206ENST00000509093 AQP7P3A6NL99 342 aa9.69□□□□□ -0.86
COPS4-206ENST00000509093 TRAF3IP2O43734 574 aaPredicted RBP9.69□□□□□ -0.86
COPS4-206ENST00000509093 CYTIPO60759 359 aa9.69□□□□□ -0.86
COPS4-206ENST00000509093 ZNF17P17021 662 aa9.69□□□□□ -0.86
COPS4-206ENST00000509093 RND2P52198 227 aa9.69□□□□□ -0.86
COPS4-206ENST00000509093 CLDN15P56746 228 aa9.69□□□□□ -0.86
COPS4-206ENST00000509093 RAC1P63000 192 aa9.69□□□□□ -0.86
COPS4-206ENST00000509093 CCL20P78556 96 aa9.69□□□□□ -0.86
COPS4-206ENST00000509093 IL13RA2Q14627 380 aa9.69□□□□□ -0.86
COPS4-206ENST00000509093 RSPO4Q2I0M5 234 aaPredicted RBP9.69□□□□□ -0.86
COPS4-206ENST00000509093 ZNF506Q5JVG8 444 aa9.69□□□□□ -0.86
COPS4-206ENST00000509093 CARD17Q5XLA6 110 aa9.69□□□□□ -0.86
COPS4-206ENST00000509093 GALNTL5Q7Z4T8 443 aa9.69□□□□□ -0.86
COPS4-206ENST00000509093 C5orf24Q7Z6I8 188 aa9.69□□□□□ -0.86
COPS4-206ENST00000509093 SLC26A10Q8NG04 563 aa9.69□□□□□ -0.86
COPS4-206ENST00000509093 R3HDM4Q96D70 268 aa9.69□□□□□ -0.86
COPS4-206ENST00000509093 POM121Q96HA1 1249 aa9.69□□□□□ -0.86
COPS4-206ENST00000509093 SNX22Q96L94 193 aa9.69□□□□□ -0.86
COPS4-206ENST00000509093 ST6GALNAC5Q9BVH7 336 aa9.69□□□□□ -0.86
COPS4-206ENST00000509093 SCAF4O95104 1147 aaKnown RBP9.68□□□□□ -0.86
COPS4-206ENST00000509093 SP1P08047 785 aa9.68□□□□□ -0.86
COPS4-206ENST00000509093 ZNF20P17024 532 aa9.68□□□□□ -0.86
COPS4-206ENST00000509093 DAP3P51398 398 aaKnown RBP9.68□□□□□ -0.86
COPS4-206ENST00000509093 CEBPGP53567 150 aa9.68□□□□□ -0.86
COPS4-206ENST00000509093 H3F3AP84243 136 aa9.68□□□□□ -0.86
COPS4-206ENST00000509093 ICAM4Q14773 271 aa9.68□□□□□ -0.86
COPS4-206ENST00000509093 CHRFAM7AQ494W8 412 aa9.68□□□□□ -0.86
COPS4-206ENST00000509093 GGNQ86UU5 652 aa9.68□□□□□ -0.86
COPS4-206ENST00000509093 HIST2H2ABQ8IUE6 130 aaPredicted RBP9.68□□□□□ -0.86
COPS4-206ENST00000509093 LINC00346Q8IVM7 164 aa9.68□□□□□ -0.86
COPS4-206ENST00000509093 UEVLDQ8IX04 471 aa9.68□□□□□ -0.86
COPS4-206ENST00000509093 CYB561D1Q8N8Q1 229 aa9.68□□□□□ -0.86
COPS4-206ENST00000509093 ADPRHL1Q8NDY3 354 aa9.68□□□□□ -0.86
COPS4-206ENST00000509093 FDCSPQ8NFU4 85 aa9.68□□□□□ -0.86
COPS4-206ENST00000509093 URM1Q9BTM9 101 aaKnown RBP9.68□□□□□ -0.86
COPS4-206ENST00000509093 TTTY12Q9BZ98 90 aa9.68□□□□□ -0.86
COPS4-206ENST00000509093 BANF2Q9H503 90 aa9.68□□□□□ -0.86
COPS4-206ENST00000509093 ZNF703Q9H7S9 590 aaPredicted RBP9.68□□□□□ -0.86
COPS4-206ENST00000509093 PLSCR2Q9NRY7 297 aa9.68□□□□□ -0.86
COPS4-206ENST00000509093 RYDENQ9NUL5 291 aaKnown RBP9.68□□□□□ -0.86
COPS4-206ENST00000509093 OR14J1Q9UGF5 321 aa9.68□□□□□ -0.86
COPS4-206ENST00000509093 BOKQ9UMX3 212 aaPredicted RBP9.68□□□□□ -0.86
COPS4-206ENST00000509093 CACNA1CQ13936 2221 aa9.68□□□□□ -0.86
COPS4-206ENST00000509093 MARCH11A6NNE9 402 aa9.68□□□□□ -0.86
COPS4-206ENST00000509093 XRCC2O43543 280 aa9.68□□□□□ -0.86
COPS4-206ENST00000509093 MBP02144 154 aa9.68□□□□□ -0.86
COPS4-206ENST00000509093 G0S2P27469 103 aa9.68□□□□□ -0.86
COPS4-206ENST00000509093 MAGEA5P43359 124 aa9.68□□□□□ -0.86
COPS4-206ENST00000509093 OR3A4PP47883 348 aa9.68□□□□□ -0.86
COPS4-206ENST00000509093 DEFB109BQ30KR1 87 aa9.68□□□□□ -0.86
COPS4-206ENST00000509093 DNM1P34Q6PK57 102 aa9.68□□□□□ -0.86
COPS4-206ENST00000509093 RNF133Q8WVZ7 376 aa9.68□□□□□ -0.86
COPS4-206ENST00000509093 CYYR1Q96J86 154 aa9.68□□□□□ -0.86
COPS4-206ENST00000509093 OXGR1Q96P68 337 aa9.68□□□□□ -0.86
COPS4-206ENST00000509093 LIPGQ9Y5X9 500 aa9.68□□□□□ -0.86
COPS4-206ENST00000509093 WSB1Q9Y6I7 421 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms