RNA–Protein interactions for RNA: ENST00000508871.5

NEDD4-209, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 5,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-209ENST00000508871 DAOP14920 347 aa3.37□□□□□ -1.87
NEDD4-209ENST00000508871 NPY1RP25929 384 aa3.37□□□□□ -1.87
NEDD4-209ENST00000508871 CD38P28907 300 aa3.37□□□□□ -1.87
NEDD4-209ENST00000508871 RAP1AP62834 184 aa3.37□□□□□ -1.87
NEDD4-209ENST00000508871 TGIF1Q15583 401 aa3.37□□□□□ -1.87
NEDD4-209ENST00000508871 ZIC1Q15915 447 aa3.37□□□□□ -1.87
NEDD4-209ENST00000508871 LRRC10Q5BKY1 277 aa3.37□□□□□ -1.87
NEDD4-209ENST00000508871 SSX8Q7RTT4 187 aa3.37□□□□□ -1.87
NEDD4-209ENST00000508871 C5orf24Q7Z6I8 188 aa3.37□□□□□ -1.87
NEDD4-209ENST00000508871 DOLPP1Q86YN1 238 aa3.37□□□□□ -1.87
NEDD4-209ENST00000508871 BPIFA4PQ86YQ2 179 aa3.37□□□□□ -1.87
NEDD4-209ENST00000508871 PELI3Q8N2H9 469 aa3.37□□□□□ -1.87
NEDD4-209ENST00000508871 SLC35G3Q8N808 338 aa3.37□□□□□ -1.87
NEDD4-209ENST00000508871 MALSU1Q96EH3 234 aa3.37□□□□□ -1.87
NEDD4-209ENST00000508871 GABRG3Q99928 467 aa3.37□□□□□ -1.87
NEDD4-209ENST00000508871 TBL1XR1Q9BZK7 514 aa3.37□□□□□ -1.87
NEDD4-209ENST00000508871 HSPB8Q9UJY1 196 aa3.37□□□□□ -1.87
NEDD4-209ENST00000508871 TRAV8-6A0A0B4J262 113 aa3.37□□□□□ -1.87
NEDD4-209ENST00000508871 C21orf140B9A014 251 aa3.37□□□□□ -1.87
NEDD4-209ENST00000508871 I3L521 148 aa3.37□□□□□ -1.87
NEDD4-209ENST00000508871 M0R143 59 aa3.37□□□□□ -1.87
NEDD4-209ENST00000508871 NEURL1O76050 574 aa3.37□□□□□ -1.87
NEDD4-209ENST00000508871 MT-ND6P03923 174 aa3.37□□□□□ -1.87
NEDD4-209ENST00000508871 CD2P06729 351 aa3.37□□□□□ -1.87
NEDD4-209ENST00000508871 ZNF43P17038 809 aa3.37□□□□□ -1.87
NEDD4-209ENST00000508871 FUT4P22083 530 aa3.37□□□□□ -1.87
NEDD4-209ENST00000508871 GADD45AP24522 165 aa3.37□□□□□ -1.87
NEDD4-209ENST00000508871 PAX9P55771 341 aa3.37□□□□□ -1.87
NEDD4-209ENST00000508871 RPS24P62847 133 aaKnown RBP3.37□□□□□ -1.87
NEDD4-209ENST00000508871 RNASE10Q5GAN6 216 aaKnown RBP3.37□□□□□ -1.87
NEDD4-209ENST00000508871 ACTL10Q5JWF8 245 aa3.37□□□□□ -1.87
NEDD4-209ENST00000508871 VRK3Q8IV63 474 aa3.37□□□□□ -1.87
NEDD4-209ENST00000508871 NANOGP1Q8N7R0 232 aa3.37□□□□□ -1.87
NEDD4-209ENST00000508871 OR2A12Q8NGT7 310 aa3.37□□□□□ -1.87
NEDD4-209ENST00000508871 TMEM234Q8WY98 164 aa3.37□□□□□ -1.87
NEDD4-209ENST00000508871 TM4SF18Q96CE8 201 aa3.37□□□□□ -1.87
NEDD4-209ENST00000508871 IL17CQ9P0M4 197 aa3.37□□□□□ -1.87
NEDD4-209ENST00000508871 CD84Q9UIB8 345 aa3.37□□□□□ -1.87
NEDD4-209ENST00000508871 ATP6AP2A0A1C7CYW4 349 aa3.36□□□□□ -1.87
NEDD4-209ENST00000508871 A0A1W2PPV9 198 aa3.36□□□□□ -1.87
NEDD4-209ENST00000508871 CLDN25C9JDP6 229 aa3.36□□□□□ -1.87
NEDD4-209ENST00000508871 C16orf97H3BN30 126 aa3.36□□□□□ -1.87
NEDD4-209ENST00000508871 LAMTOR5O43504 91 aa3.36□□□□□ -1.87
NEDD4-209ENST00000508871 GNG7O60262 68 aa3.36□□□□□ -1.87
NEDD4-209ENST00000508871 CTNSO60931 367 aa3.36□□□□□ -1.87
NEDD4-209ENST00000508871 SERPINB7O75635 380 aa3.36□□□□□ -1.87
NEDD4-209ENST00000508871 SLC25A14O95258 325 aaPredicted RBP3.36□□□□□ -1.87
NEDD4-209ENST00000508871 CA2P00918 260 aa3.36□□□□□ -1.87
NEDD4-209ENST00000508871 HOXC4P09017 264 aaPredicted RBP3.36□□□□□ -1.87
NEDD4-209ENST00000508871 OR5AL1P0C617 328 aa3.36□□□□□ -1.87
NEDD4-209ENST00000508871 OR56A5P0C7T3 313 aa3.36□□□□□ -1.87
NEDD4-209ENST00000508871 RPS13P62277 151 aaKnown RBP3.36□□□□□ -1.87
NEDD4-209ENST00000508871 GAGE5Q13069 117 aa3.36□□□□□ -1.87
NEDD4-209ENST00000508871 GAGE6Q13070 117 aa3.36□□□□□ -1.87
NEDD4-209ENST00000508871 HLA-BQ31612 363 aa3.36□□□□□ -1.87
NEDD4-209ENST00000508871 DHRS4L2Q6PKH6 230 aa3.36□□□□□ -1.87
NEDD4-209ENST00000508871 TEX261Q6UWH6 196 aa3.36□□□□□ -1.87
NEDD4-209ENST00000508871 ZNF767PQ75MW2 155 aa3.36□□□□□ -1.87
NEDD4-209ENST00000508871 ZNF695Q8IW36 515 aa3.36□□□□□ -1.87
NEDD4-209ENST00000508871 FAM109AQ8N4B1 249 aa3.36□□□□□ -1.87
NEDD4-209ENST00000508871 TMEM163Q8TC26 289 aa3.36□□□□□ -1.87
NEDD4-209ENST00000508871 ZNF488Q96MN9 340 aa3.36□□□□□ -1.87
NEDD4-209ENST00000508871 OR2J1Q9GZK6 312 aa3.36□□□□□ -1.87
NEDD4-209ENST00000508871 CXXC4Q9H2H0 198 aa3.36□□□□□ -1.87
NEDD4-209ENST00000508871 UQCC1Q9NVA1 299 aa3.36□□□□□ -1.87
NEDD4-209ENST00000508871 U3KQ87 197 aa3.36□□□□□ -1.87
NEDD4-209ENST00000508871 LRP4O75096 1905 aa3.36□□□□□ -1.87
NEDD4-209ENST00000508871 J3QLI3 93 aa3.36□□□□□ -1.87
NEDD4-209ENST00000508871 SOX3P41225 446 aa3.36□□□□□ -1.87
NEDD4-209ENST00000508871 DPTQ07507 201 aa3.36□□□□□ -1.87
NEDD4-209ENST00000508871 PLCXD2Q0VAA5 305 aa3.36□□□□□ -1.87
NEDD4-209ENST00000508871 RAB40BQ12829 278 aa3.36□□□□□ -1.87
NEDD4-209ENST00000508871 GAGE2BQ13066 116 aa3.36□□□□□ -1.87
NEDD4-209ENST00000508871 GUSBP1Q15486 140 aa3.36□□□□□ -1.87
NEDD4-209ENST00000508871 SLC25A35Q3KQZ1 300 aa3.36□□□□□ -1.87
NEDD4-209ENST00000508871 GAGE2EQ4V326 116 aa3.36□□□□□ -1.87
NEDD4-209ENST00000508871 ATP6AP1LQ52LC2 224 aa3.36□□□□□ -1.87
NEDD4-209ENST00000508871 AVPI1Q5T686 147 aa3.36□□□□□ -1.87
NEDD4-209ENST00000508871 GAGE2AQ6NT46 116 aa3.36□□□□□ -1.87
NEDD4-209ENST00000508871 BIRC8Q96P09 236 aa3.36□□□□□ -1.87
NEDD4-209ENST00000508871 SOSTQ9BQB4 213 aa3.36□□□□□ -1.87
NEDD4-209ENST00000508871 SLIRPQ9GZT3 109 aaKnown RBP3.36□□□□□ -1.87
NEDD4-209ENST00000508871 MMP28Q9H239 520 aa3.36□□□□□ -1.87
NEDD4-209ENST00000508871 OR51M1Q9H341 326 aa3.36□□□□□ -1.87
NEDD4-209ENST00000508871 MAGIXQ9H6Y5 334 aa3.36□□□□□ -1.87
NEDD4-209ENST00000508871 C14orf105Q9NVL8 296 aa3.36□□□□□ -1.87
NEDD4-209ENST00000508871 GAGE2DQ9UEU5 116 aa3.36□□□□□ -1.87
NEDD4-209ENST00000508871 MUTYHQ9UIF7 546 aa3.36□□□□□ -1.87
NEDD4-209ENST00000508871 PLXND1Q9Y4D7 1925 aa3.36□□□□□ -1.87
NEDD4-209ENST00000508871 A0A1W2PPC1 479 aa3.36□□□□□ -1.87
NEDD4-209ENST00000508871 CREG1O75629 220 aa3.36□□□□□ -1.87
NEDD4-209ENST00000508871 CDRT1O95170 752 aa3.36□□□□□ -1.87
NEDD4-209ENST00000508871 NGFP01138 241 aa3.36□□□□□ -1.87
NEDD4-209ENST00000508871 PPP3R1P63098 170 aa3.36□□□□□ -1.87
NEDD4-209ENST00000508871 MRPS11P82912 194 aaKnown RBP3.36□□□□□ -1.87
NEDD4-209ENST00000508871 RNASE12Q5GAN4 147 aaKnown RBP3.36□□□□□ -1.87
NEDD4-209ENST00000508871 SCGB1D4Q6XE38 83 aa3.36□□□□□ -1.87
NEDD4-209ENST00000508871 TRAPPC6BQ86SZ2 158 aa3.36□□□□□ -1.87
NEDD4-209ENST00000508871 OR56A4Q8NGH8 313 aa3.36□□□□□ -1.87
NEDD4-209ENST00000508871 YIPF6Q96EC8 236 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms