RNA–Protein interactions for RNA: ENST00000508049.1

CLOCK-207, Transcript of clock circadian regulator, humanhuman

TSL 3

Gene CLOCK, Length 401 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-207ENST00000508049 AGTP01019 485 aa-0.32□□□□□ -2.46
CLOCK-207ENST00000508049 IGKV1D-12P01611 117 aa-0.32□□□□□ -2.46
CLOCK-207ENST00000508049 HLA-HP01893 362 aa-0.32□□□□□ -2.46
CLOCK-207ENST00000508049 GYPCP04921 128 aa-0.32□□□□□ -2.46
CLOCK-207ENST00000508049 CRYGDP07320 174 aa-0.32□□□□□ -2.46
CLOCK-207ENST00000508049 SOD3P08294 240 aa-0.32□□□□□ -2.46
CLOCK-207ENST00000508049 IGHV3-30-3P0DP02 117 aa-0.32□□□□□ -2.46
CLOCK-207ENST00000508049 CTSEP14091 401 aa-0.32□□□□□ -2.46
CLOCK-207ENST00000508049 AKR1C3P42330 323 aa-0.32□□□□□ -2.46
CLOCK-207ENST00000508049 PSMB2P49721 201 aa-0.32□□□□□ -2.46
CLOCK-207ENST00000508049 HINT1P49773 126 aaPredicted RBP-0.32□□□□□ -2.46
CLOCK-207ENST00000508049 GBX2P52951 348 aaPredicted RBP-0.32□□□□□ -2.46
CLOCK-207ENST00000508049 UBE2MP61081 183 aaKnown RBP-0.32□□□□□ -2.46
CLOCK-207ENST00000508049 SKP2Q13309 424 aa-0.32□□□□□ -2.46
CLOCK-207ENST00000508049 APOFQ13790 326 aa-0.32□□□□□ -2.46
CLOCK-207ENST00000508049 PPP1R7Q15435 360 aa-0.32□□□□□ -2.46
CLOCK-207ENST00000508049 TAF7Q15545 349 aaPredicted RBP-0.32□□□□□ -2.46
CLOCK-207ENST00000508049 TOMM34Q15785 309 aaPredicted RBP-0.32□□□□□ -2.46
CLOCK-207ENST00000508049 GABRA6Q16445 453 aa-0.32□□□□□ -2.46
CLOCK-207ENST00000508049 C5orf64Q2M2E5 130 aa-0.32□□□□□ -2.46
CLOCK-207ENST00000508049 Q499Y3 187 aa-0.32□□□□□ -2.46
CLOCK-207ENST00000508049 CDNFQ49AH0 187 aa-0.32□□□□□ -2.46
CLOCK-207ENST00000508049 ATP6AP1LQ52LC2 224 aa-0.32□□□□□ -2.46
CLOCK-207ENST00000508049 LRRC23Q53EV4 343 aaPredicted RBP-0.32□□□□□ -2.46
CLOCK-207ENST00000508049 ERICH5Q6P6B1 374 aa-0.32□□□□□ -2.46
CLOCK-207ENST00000508049 VTCN1Q7Z7D3 282 aa-0.32□□□□□ -2.46
CLOCK-207ENST00000508049 SCD5Q86SK9 330 aa-0.32□□□□□ -2.46
CLOCK-207ENST00000508049 APRG1Q8IVJ8 170 aa-0.32□□□□□ -2.46
CLOCK-207ENST00000508049 UBE2J2Q8N2K1 259 aa-0.32□□□□□ -2.46
CLOCK-207ENST00000508049 ASCC1Q8N9N2 400 aaKnown RBP-0.32□□□□□ -2.46
CLOCK-207ENST00000508049 BBOF1Q8ND07 529 aa-0.32□□□□□ -2.46
CLOCK-207ENST00000508049 OR52K1Q8NGK4 314 aa-0.32□□□□□ -2.46
CLOCK-207ENST00000508049 ZNRF2Q8NHG8 242 aa-0.32□□□□□ -2.46
CLOCK-207ENST00000508049 NDNFQ8TB73 568 aa-0.32□□□□□ -2.46
CLOCK-207ENST00000508049 ZFAND1Q8TCF1 268 aa-0.32□□□□□ -2.46
CLOCK-207ENST00000508049 TMEM234Q8WY98 164 aa-0.32□□□□□ -2.46
CLOCK-207ENST00000508049 REEP6Q96HR9 211 aa-0.32□□□□□ -2.46
CLOCK-207ENST00000508049 CPB2Q96IY4 423 aa-0.32□□□□□ -2.46
CLOCK-207ENST00000508049 MBOAT7Q96N66 472 aa-0.32□□□□□ -2.46
CLOCK-207ENST00000508049 RILPQ96NA2 401 aa-0.32□□□□□ -2.46
CLOCK-207ENST00000508049 TGS1Q96RS0 853 aaKnown RBP-0.32□□□□□ -2.46
CLOCK-207ENST00000508049 ZBTB18Q99592 522 aa-0.32□□□□□ -2.46
CLOCK-207ENST00000508049 TBX5Q99593 518 aa-0.32□□□□□ -2.46
CLOCK-207ENST00000508049 TMED9Q9BVK6 235 aa-0.32□□□□□ -2.46
CLOCK-207ENST00000508049 C1QTNF6Q9BXI9 259 aa-0.32□□□□□ -2.46
CLOCK-207ENST00000508049 ZNF436Q9C0F3 470 aaPredicted RBP-0.32□□□□□ -2.46
CLOCK-207ENST00000508049 CHST5Q9GZS9 411 aa-0.32□□□□□ -2.46
CLOCK-207ENST00000508049 ALX4Q9H161 411 aaPredicted RBP-0.32□□□□□ -2.46
CLOCK-207ENST00000508049 CD209Q9NNX6 404 aa-0.32□□□□□ -2.46
CLOCK-207ENST00000508049 C8orf4Q9NR00 106 aa-0.32□□□□□ -2.46
CLOCK-207ENST00000508049 RBM12B-AS1Q9P1G2 102 aa-0.32□□□□□ -2.46
CLOCK-207ENST00000508049 PSMD13Q9UNM6 376 aa-0.32□□□□□ -2.46
CLOCK-207ENST00000508049 FLVCR2Q9UPI3 526 aa-0.32□□□□□ -2.46
CLOCK-207ENST00000508049 C14orf166Q9Y224 244 aaKnown RBP-0.32□□□□□ -2.46
CLOCK-207ENST00000508049 KLF12Q9Y4X4 402 aa-0.32□□□□□ -2.46
CLOCK-207ENST00000508049 FAM215AQ9Y5M1 114 aa-0.32□□□□□ -2.46
CLOCK-207ENST00000508049 ORC6Q9Y5N6 252 aa-0.32□□□□□ -2.46
CLOCK-207ENST00000508049 PUS1Q9Y606 427 aaKnown RBP eCLIP-0.32□□□□□ -2.46
CLOCK-207ENST00000508049 SAR1BQ9Y6B6 198 aa-0.32□□□□□ -2.46
CLOCK-207ENST00000508049 SCN3AQ9NY46 2000 aa-0.32□□□□□ -2.46
CLOCK-207ENST00000508049 NSD2O96028 1365 aa-0.32□□□□□ -2.46
CLOCK-207ENST00000508049 MEIKINA0A087WXM9 373 aa-0.33□□□□□ -2.46
CLOCK-207ENST00000508049 SLC5A10A0PJK1 596 aa-0.33□□□□□ -2.46
CLOCK-207ENST00000508049 SMCO3A2RU48 225 aa-0.33□□□□□ -2.46
CLOCK-207ENST00000508049 TMEM235A6NFC5 223 aa-0.33□□□□□ -2.46
CLOCK-207ENST00000508049 C11orf86A6NJI1 115 aa-0.33□□□□□ -2.46
CLOCK-207ENST00000508049 TMEM250H0YL14 139 aa-0.33□□□□□ -2.46
CLOCK-207ENST00000508049 UPK2O00526 184 aa-0.33□□□□□ -2.46
CLOCK-207ENST00000508049 RNF113AO15541 343 aaKnown RBP-0.33□□□□□ -2.46
CLOCK-207ENST00000508049 XRCC2O43543 280 aa-0.33□□□□□ -2.46
CLOCK-207ENST00000508049 TCF21O43680 179 aa-0.33□□□□□ -2.46
CLOCK-207ENST00000508049 SPOPO43791 374 aa-0.33□□□□□ -2.46
CLOCK-207ENST00000508049 DHRS3O75911 302 aa-0.33□□□□□ -2.46
CLOCK-207ENST00000508049 CIAO1O76071 339 aa-0.33□□□□□ -2.46
CLOCK-207ENST00000508049 FTH1P02794 183 aa-0.33□□□□□ -2.46
CLOCK-207ENST00000508049 CATP04040 527 aaKnown RBP-0.33□□□□□ -2.46
CLOCK-207ENST00000508049 CECR9P0C854 216 aa-0.33□□□□□ -2.46
CLOCK-207ENST00000508049 SCGB1C2P0DMR2 95 aa-0.33□□□□□ -2.46
CLOCK-207ENST00000508049 RALBP11234 206 aa-0.33□□□□□ -2.46
CLOCK-207ENST00000508049 NCF2P19878 526 aaPredicted RBP-0.33□□□□□ -2.46
CLOCK-207ENST00000508049 STOMP27105 288 aa-0.33□□□□□ -2.46
CLOCK-207ENST00000508049 GTF2E2P29084 291 aaKnown RBP-0.33□□□□□ -2.46
CLOCK-207ENST00000508049 P2RY2P41231 377 aa-0.33□□□□□ -2.46
CLOCK-207ENST00000508049 LPAR6P43657 344 aa-0.33□□□□□ -2.46
CLOCK-207ENST00000508049 RPL27AP46776 148 aaKnown RBP-0.33□□□□□ -2.46
CLOCK-207ENST00000508049 RPL14P50914 215 aaKnown RBP-0.33□□□□□ -2.46
CLOCK-207ENST00000508049 ACTR1AP61163 376 aa-0.33□□□□□ -2.46
CLOCK-207ENST00000508049 ERHP84090 104 aaKnown RBP-0.33□□□□□ -2.46
CLOCK-207ENST00000508049 CD164Q04900 197 aa-0.33□□□□□ -2.46
CLOCK-207ENST00000508049 SLC38A11Q08AI6 406 aa-0.33□□□□□ -2.46
CLOCK-207ENST00000508049 GPR176Q14439 515 aa-0.33□□□□□ -2.46
CLOCK-207ENST00000508049 ZMYND11Q15326 602 aa-0.33□□□□□ -2.46
CLOCK-207ENST00000508049 SSX2Q16385 188 aa-0.33□□□□□ -2.46
CLOCK-207ENST00000508049 CDC37Q16543 378 aaPredicted RBP-0.33□□□□□ -2.46
CLOCK-207ENST00000508049 Q1T7F1 81 aa-0.33□□□□□ -2.46
CLOCK-207ENST00000508049 PDPK2PQ6A1A2 396 aa-0.33□□□□□ -2.46
CLOCK-207ENST00000508049 EPGNQ6UW88 154 aa-0.33□□□□□ -2.46
CLOCK-207ENST00000508049 OLIG3Q7RTU3 272 aa-0.33□□□□□ -2.46
CLOCK-207ENST00000508049 GALNT10Q86SR1 603 aa-0.33□□□□□ -2.46
CLOCK-207ENST00000508049 SETD3Q86TU7 594 aaPredicted RBP-0.33□□□□□ -2.46
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms