RNA–Protein interactions for RNA: ENST00000507004.1

HMGCS1-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 950 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-203ENST00000507004 TNFAIP8L1Q8WVP5 186 aa11.57□□□□□ -0.56
HMGCS1-203ENST00000507004 R3HDM4Q96D70 268 aa11.57□□□□□ -0.56
HMGCS1-203ENST00000507004 COQ2Q96H96 371 aa11.57□□□□□ -0.56
HMGCS1-203ENST00000507004 RBM14Q96PK6 669 aaKnown RBP11.57□□□□□ -0.56
HMGCS1-203ENST00000507004 S100A13Q99584 98 aa11.57□□□□□ -0.56
HMGCS1-203ENST00000507004 PDCD1LG2Q9BQ51 273 aa11.57□□□□□ -0.56
HMGCS1-203ENST00000507004 LINC00574Q9H8X3 128 aa11.57□□□□□ -0.56
HMGCS1-203ENST00000507004 AMBNQ9NP70 447 aa11.57□□□□□ -0.56
HMGCS1-203ENST00000507004 TMEM138Q9NPI0 162 aa11.57□□□□□ -0.56
HMGCS1-203ENST00000507004 CHCHD3Q9NX63 227 aaKnown RBP11.57□□□□□ -0.56
HMGCS1-203ENST00000507004 SMPD3Q9NY59 655 aaPredicted RBP11.57□□□□□ -0.56
HMGCS1-203ENST00000507004 IL36GQ9NZH8 169 aa11.57□□□□□ -0.56
HMGCS1-203ENST00000507004 MMP23AO75900 390 aa11.56□□□□□ -0.56
HMGCS1-203ENST00000507004 CD28P10747 220 aa11.56□□□□□ -0.56
HMGCS1-203ENST00000507004 MYL12AP19105 171 aa11.56□□□□□ -0.56
HMGCS1-203ENST00000507004 BLCAPP62952 87 aa11.56□□□□□ -0.56
HMGCS1-203ENST00000507004 HABP2Q14520 560 aaPredicted RBP11.56□□□□□ -0.56
HMGCS1-203ENST00000507004 ATXN7L3Q14CW9 347 aaPredicted RBP11.56□□□□□ -0.56
HMGCS1-203ENST00000507004 NSUN5P1Q3KNT7 163 aa11.56□□□□□ -0.56
HMGCS1-203ENST00000507004 NHLRC3Q5JS37 347 aa11.56□□□□□ -0.56
HMGCS1-203ENST00000507004 TTC23Q5W5X9 447 aa11.56□□□□□ -0.56
HMGCS1-203ENST00000507004 ASCL4Q6XD76 172 aa11.56□□□□□ -0.56
HMGCS1-203ENST00000507004 CENPVQ7Z7K6 275 aaPredicted RBP11.56□□□□□ -0.56
HMGCS1-203ENST00000507004 SETD9Q8NE22 299 aa11.56□□□□□ -0.56
HMGCS1-203ENST00000507004 OR4X2Q8NGF9 303 aa11.56□□□□□ -0.56
HMGCS1-203ENST00000507004 CNIH3Q8TBE1 160 aa11.56□□□□□ -0.56
HMGCS1-203ENST00000507004 RPEQ96AT9 228 aa11.56□□□□□ -0.56
HMGCS1-203ENST00000507004 SLC29A1Q99808 456 aa11.56□□□□□ -0.56
HMGCS1-203ENST00000507004 OCSTAMPQ9BR26 566 aa11.56□□□□□ -0.56
HMGCS1-203ENST00000507004 SLC25A33Q9BSK2 321 aa11.56□□□□□ -0.56
HMGCS1-203ENST00000507004 METTL9Q9H1A3 318 aa11.56□□□□□ -0.56
HMGCS1-203ENST00000507004 MMP28Q9H239 520 aa11.56□□□□□ -0.56
HMGCS1-203ENST00000507004 IFT22Q9H7X7 185 aa11.56□□□□□ -0.56
HMGCS1-203ENST00000507004 RAB9BQ9NP90 201 aa11.56□□□□□ -0.56
HMGCS1-203ENST00000507004 EXOSC1Q9Y3B2 195 aaKnown RBP11.56□□□□□ -0.56
HMGCS1-203ENST00000507004 PLXNB1O43157 2135 aa11.56□□□□□ -0.56
HMGCS1-203ENST00000507004 MEIKINA0A087WXM9 373 aa11.55□□□□□ -0.56
HMGCS1-203ENST00000507004 GABRPO00591 440 aa11.55□□□□□ -0.56
HMGCS1-203ENST00000507004 IL1AP01583 271 aa11.55□□□□□ -0.56
HMGCS1-203ENST00000507004 CSTBP04080 98 aaKnown RBP11.55□□□□□ -0.56
HMGCS1-203ENST00000507004 LIMS3P0CW19 117 aa11.55□□□□□ -0.56
HMGCS1-203ENST00000507004 LIMS4P0CW20 117 aa11.55□□□□□ -0.56
HMGCS1-203ENST00000507004 CGB3P0DN86 165 aa11.55□□□□□ -0.56
HMGCS1-203ENST00000507004 CGB7P0DN87 165 aa11.55□□□□□ -0.56
HMGCS1-203ENST00000507004 GZMHP20718 246 aa11.55□□□□□ -0.56
HMGCS1-203ENST00000507004 RAB7AP51149 207 aa11.55□□□□□ -0.56
HMGCS1-203ENST00000507004 CD83Q01151 205 aa11.55□□□□□ -0.56
HMGCS1-203ENST00000507004 GPR176Q14439 515 aa11.55□□□□□ -0.56
HMGCS1-203ENST00000507004 C17orf58Q2M2W7 97 aa11.55□□□□□ -0.56
HMGCS1-203ENST00000507004 SATL1Q86VE3 508 aa11.55□□□□□ -0.56
HMGCS1-203ENST00000507004 C1QL4Q86Z23 238 aa11.55□□□□□ -0.56
HMGCS1-203ENST00000507004 OR5AU1Q8NGC0 362 aa11.55□□□□□ -0.56
HMGCS1-203ENST00000507004 TMEM106AQ96A25 262 aa11.55□□□□□ -0.56
HMGCS1-203ENST00000507004 KIRREL1Q96J84 757 aa11.55□□□□□ -0.56
HMGCS1-203ENST00000507004 CITED2Q99967 270 aaPredicted RBP11.55□□□□□ -0.56
HMGCS1-203ENST00000507004 FAM192AQ9GZU8 254 aa11.55□□□□□ -0.56
HMGCS1-203ENST00000507004 ZNF286AQ9HBT8 521 aa11.55□□□□□ -0.56
HMGCS1-203ENST00000507004 CALYQ9NYX4 217 aa11.55□□□□□ -0.56
HMGCS1-203ENST00000507004 IDI2-AS1Q9NZ38 188 aa11.55□□□□□ -0.56
HMGCS1-203ENST00000507004 CKLFQ9UBR5 152 aa11.55□□□□□ -0.56
HMGCS1-203ENST00000507004 AASSQ9UDR5 926 aa11.55□□□□□ -0.56
HMGCS1-203ENST00000507004 ZNF281Q9Y2X9 895 aa11.55□□□□□ -0.56
HMGCS1-203ENST00000507004 NPIPB11E5RHQ5 1161 aa11.54□□□□□ -0.56
HMGCS1-203ENST00000507004 E9PI62 339 aa11.54□□□□□ -0.56
HMGCS1-203ENST00000507004 LY6LH3BQJ8 138 aa11.54□□□□□ -0.56
HMGCS1-203ENST00000507004 CLIC3O95833 236 aa11.54□□□□□ -0.56
HMGCS1-203ENST00000507004 NFYBP25208 207 aa11.54□□□□□ -0.56
HMGCS1-203ENST00000507004 ZNF93P35789 620 aaPredicted RBP11.54□□□□□ -0.56
HMGCS1-203ENST00000507004 GLP1RP43220 463 aa11.54□□□□□ -0.56
HMGCS1-203ENST00000507004 MADCAM1Q13477 382 aa11.54□□□□□ -0.56
HMGCS1-203ENST00000507004 MPV17LQ2QL34 196 aa11.54□□□□□ -0.56
HMGCS1-203ENST00000507004 OR8H3Q8N146 312 aa11.54□□□□□ -0.56
HMGCS1-203ENST00000507004 PACRGLQ8N7B6 248 aa11.54□□□□□ -0.56
HMGCS1-203ENST00000507004 APH1BQ8WW43 257 aa11.54□□□□□ -0.56
HMGCS1-203ENST00000507004 THRSPQ92748 146 aa11.54□□□□□ -0.56
HMGCS1-203ENST00000507004 TOMM40LQ969M1 308 aa11.54□□□□□ -0.56
HMGCS1-203ENST00000507004 SMIM19Q96E16 107 aa11.54□□□□□ -0.56
HMGCS1-203ENST00000507004 NR1H4Q96RI1 486 aaPredicted RBP11.54□□□□□ -0.56
HMGCS1-203ENST00000507004 SPACA1Q9HBV2 294 aa11.54□□□□□ -0.56
HMGCS1-203ENST00000507004 BABAM2Q9NXR7 383 aa11.54□□□□□ -0.56
HMGCS1-203ENST00000507004 KIF25Q9UIL4 384 aa11.54□□□□□ -0.56
HMGCS1-203ENST00000507004 DIMT1Q9UNQ2 313 aaKnown RBP11.54□□□□□ -0.56
HMGCS1-203ENST00000507004 MOB4Q9Y3A3 225 aa11.54□□□□□ -0.56
HMGCS1-203ENST00000507004 TSSC4Q9Y5U2 329 aaPredicted RBP11.54□□□□□ -0.56
HMGCS1-203ENST00000507004 HSPE1-MOB4S4R3N1 261 aa11.54□□□□□ -0.56
HMGCS1-203ENST00000507004 NOTCH3Q9UM47 2321 aa11.53□□□□□ -0.56
HMGCS1-203ENST00000507004 VWFP04275 2813 aa11.53□□□□□ -0.56
HMGCS1-203ENST00000507004 TRAV24A0A0B4J272 114 aa11.53□□□□□ -0.56
HMGCS1-203ENST00000507004 G3V4G9 280 aa11.53□□□□□ -0.56
HMGCS1-203ENST00000507004 J3QR06 171 aa11.53□□□□□ -0.56
HMGCS1-203ENST00000507004 OGG1O15527 345 aa11.53□□□□□ -0.56
HMGCS1-203ENST00000507004 HTR3BO95264 441 aa11.53□□□□□ -0.56
HMGCS1-203ENST00000507004 DUS4LO95620 317 aaKnown RBP11.53□□□□□ -0.56
HMGCS1-203ENST00000507004 BAG2O95816 211 aa11.53□□□□□ -0.56
HMGCS1-203ENST00000507004 PF4V1P10720 104 aa11.53□□□□□ -0.56
HMGCS1-203ENST00000507004 BDKRB2P30411 391 aa11.53□□□□□ -0.56
HMGCS1-203ENST00000507004 OR3A4PP47883 348 aa11.53□□□□□ -0.56
HMGCS1-203ENST00000507004 SOX2P48431 317 aa11.53□□□□□ -0.56
HMGCS1-203ENST00000507004 TAS2R43P59537 309 aa11.53□□□□□ -0.56
HMGCS1-203ENST00000507004 TMEM30BQ3MIR4 351 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms