RNA–Protein interactions for RNA: ENST00000507001.1

SPCS3-202, Transcript of signal peptidase complex subunit 3, humanhuman

TSL 2

Gene SPCS3, Length 478 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3-202ENST00000507001 OLFM3Q96PB7 478 aa2.6□□□□□ -1.99
SPCS3-202ENST00000507001 TRNT1Q96Q11 434 aaKnown RBP2.6□□□□□ -1.99
SPCS3-202ENST00000507001 SHANK2-AS3Q9BTD1 123 aa2.6□□□□□ -1.99
SPCS3-202ENST00000507001 TSSK6Q9BXA6 273 aa2.6□□□□□ -1.99
SPCS3-202ENST00000507001 RHOFQ9HBH0 211 aa2.6□□□□□ -1.99
SPCS3-202ENST00000507001 ZNF492Q9P255 531 aa2.6□□□□□ -1.99
SPCS3-202ENST00000507001 TBL2Q9Y4P3 447 aaKnown RBP2.6□□□□□ -1.99
SPCS3-202ENST00000507001 SCN4AP35499 1836 aa2.6□□□□□ -1.99
SPCS3-202ENST00000507001 IGKV1D-17A0A075B6S4 117 aa2.59□□□□□ -1.99
SPCS3-202ENST00000507001 IGHV2-26A0A0B4J1V2 119 aa2.59□□□□□ -1.99
SPCS3-202ENST00000507001 IGHV3-43A0A0B4J1X8 118 aa2.59□□□□□ -1.99
SPCS3-202ENST00000507001 GMNCA6NCL1 334 aa2.59□□□□□ -1.99
SPCS3-202ENST00000507001 OR6C70A6NIJ9 312 aa2.59□□□□□ -1.99
SPCS3-202ENST00000507001 FAM183AA6NL82 134 aa2.59□□□□□ -1.99
SPCS3-202ENST00000507001 F5H5P2 479 aa2.59□□□□□ -1.99
SPCS3-202ENST00000507001 J3QLI3 93 aa2.59□□□□□ -1.99
SPCS3-202ENST00000507001 EPPINO95925 133 aa2.59□□□□□ -1.99
SPCS3-202ENST00000507001 IGKV1-17P01599 117 aa2.59□□□□□ -1.99
SPCS3-202ENST00000507001 IGHG2P01859 326 aa2.59□□□□□ -1.99
SPCS3-202ENST00000507001 CGB3P0DN86 165 aa2.59□□□□□ -1.99
SPCS3-202ENST00000507001 CGB7P0DN87 165 aa2.59□□□□□ -1.99
SPCS3-202ENST00000507001 GTF2F2P13984 249 aa2.59□□□□□ -1.99
SPCS3-202ENST00000507001 ELK4P28324 431 aa2.59□□□□□ -1.99
SPCS3-202ENST00000507001 PYCR1P32322 319 aa2.59□□□□□ -1.99
SPCS3-202ENST00000507001 ENDOGQ14249 297 aaKnown RBP2.59□□□□□ -1.99
SPCS3-202ENST00000507001 MRPL2Q5T653 305 aaKnown RBP2.59□□□□□ -1.99
SPCS3-202ENST00000507001 CLEC20AQ6ZU45 233 aa2.59□□□□□ -1.99
SPCS3-202ENST00000507001 SSX7Q7RTT5 188 aa2.59□□□□□ -1.99
SPCS3-202ENST00000507001 ADM2Q7Z4H4 148 aa2.59□□□□□ -1.99
SPCS3-202ENST00000507001 FAM19A3Q7Z5A8 133 aa2.59□□□□□ -1.99
SPCS3-202ENST00000507001 AMN1Q8IY45 258 aa2.59□□□□□ -1.99
SPCS3-202ENST00000507001 ACBD4Q8NC06 268 aa2.59□□□□□ -1.99
SPCS3-202ENST00000507001 OR8A1Q8NGG7 326 aa2.59□□□□□ -1.99
SPCS3-202ENST00000507001 CCDC12Q8WUD4 166 aaPredicted RBP2.59□□□□□ -1.99
SPCS3-202ENST00000507001 YIPF5Q969M3 257 aa2.59□□□□□ -1.99
SPCS3-202ENST00000507001 SLC19A3Q9BZV2 496 aa2.59□□□□□ -1.99
SPCS3-202ENST00000507001 OR51E2Q9H255 320 aa2.59□□□□□ -1.99
SPCS3-202ENST00000507001 TXNIPQ9H3M7 391 aa2.59□□□□□ -1.99
SPCS3-202ENST00000507001 TRIM45Q9H8W5 580 aaPredicted RBP2.59□□□□□ -1.99
SPCS3-202ENST00000507001 ZNF586Q9NXT0 402 aa2.59□□□□□ -1.99
SPCS3-202ENST00000507001 POMPQ9Y244 141 aa2.59□□□□□ -1.99
SPCS3-202ENST00000507001 MIA3Q5JRA6 1907 aa2.59□□□□□ -1.99
SPCS3-202ENST00000507001 USP42Q9H9J4 1324 aaKnown RBP2.59□□□□□ -2
SPCS3-202ENST00000507001 LRPPRCP42704 1394 aaKnown RBP2.59□□□□□ -2
SPCS3-202ENST00000507001 TICRRQ7Z2Z1 1910 aa2.58□□□□□ -2
SPCS3-202ENST00000507001 IGHV3-21A0A0B4J1V1 117 aa2.58□□□□□ -2
SPCS3-202ENST00000507001 VGLL3A8MV65 326 aa2.58□□□□□ -2
SPCS3-202ENST00000507001 TOR1AO14656 332 aa2.58□□□□□ -2
SPCS3-202ENST00000507001 TCF21O43680 179 aa2.58□□□□□ -2
SPCS3-202ENST00000507001 CALUO43852 315 aaPredicted RBP2.58□□□□□ -2
SPCS3-202ENST00000507001 ZNF35P13682 527 aa2.58□□□□□ -2
SPCS3-202ENST00000507001 ZNF3P17036 446 aa2.58□□□□□ -2
SPCS3-202ENST00000507001 KLF3P57682 345 aaPredicted RBP2.58□□□□□ -2
SPCS3-202ENST00000507001 SKP1P63208 163 aa2.58□□□□□ -2
SPCS3-202ENST00000507001 ZNHIT3Q15649 155 aaPredicted RBP2.58□□□□□ -2
SPCS3-202ENST00000507001 GOLGA7BQ2TAP0 167 aa2.58□□□□□ -2
SPCS3-202ENST00000507001 CLEC6AQ6EIG7 209 aa2.58□□□□□ -2
SPCS3-202ENST00000507001 CRLF3Q8IUI8 442 aa2.58□□□□□ -2
SPCS3-202ENST00000507001 SLC25A45Q8N413 288 aa2.58□□□□□ -2
SPCS3-202ENST00000507001 DYNC2LI1Q8TCX1 351 aa2.58□□□□□ -2
SPCS3-202ENST00000507001 OTUB2Q96DC9 234 aa2.58□□□□□ -2
SPCS3-202ENST00000507001 PRSS27Q9BQR3 290 aa2.58□□□□□ -2
SPCS3-202ENST00000507001 UPF3BQ9BZI7 483 aaKnown RBP2.58□□□□□ -2
SPCS3-202ENST00000507001 ASCL3Q9NQ33 180 aa2.58□□□□□ -2
SPCS3-202ENST00000507001 EURLQ9NYK6 297 aa2.58□□□□□ -2
SPCS3-202ENST00000507001 ICOSQ9Y6W8 199 aa2.58□□□□□ -2
SPCS3-202ENST00000507001 ZNF729A6NN14 1252 aaPredicted RBP2.57□□□□□ -2
SPCS3-202ENST00000507001 A8MWP4 228 aa2.57□□□□□ -2
SPCS3-202ENST00000507001 EFCAB9A8MZ26 197 aa2.57□□□□□ -2
SPCS3-202ENST00000507001 F8VZ95 297 aa2.57□□□□□ -2
SPCS3-202ENST00000507001 K7ERS5 55 aa2.57□□□□□ -2
SPCS3-202ENST00000507001 GPR171O14626 319 aa2.57□□□□□ -2
SPCS3-202ENST00000507001 IGKV1D-33P01593 117 aa2.57□□□□□ -2
SPCS3-202ENST00000507001 IGKV1-33P01594 117 aa2.57□□□□□ -2
SPCS3-202ENST00000507001 INAFM2P0DMQ5 153 aa2.57□□□□□ -2
SPCS3-202ENST00000507001 GABRA1P14867 456 aa2.57□□□□□ -2
SPCS3-202ENST00000507001 RHOAP61586 193 aa2.57□□□□□ -2
SPCS3-202ENST00000507001 TIMM23BQ5SRD1 257 aa2.57□□□□□ -2
SPCS3-202ENST00000507001 FAM162BQ5T6X4 162 aa2.57□□□□□ -2
SPCS3-202ENST00000507001 ZNF660Q6AZW8 331 aaPredicted RBP2.57□□□□□ -2
SPCS3-202ENST00000507001 XKRXQ6PP77 449 aa2.57□□□□□ -2
SPCS3-202ENST00000507001 OLIG3Q7RTU3 272 aa2.57□□□□□ -2
SPCS3-202ENST00000507001 ATP6V1C2Q8NEY4 427 aa2.57□□□□□ -2
SPCS3-202ENST00000507001 OR7G1Q8NGA0 311 aa2.57□□□□□ -2
SPCS3-202ENST00000507001 CASTOR1Q8WTX7 329 aa2.57□□□□□ -2
SPCS3-202ENST00000507001 LRRC45Q96CN5 670 aa2.57□□□□□ -2
SPCS3-202ENST00000507001 OR2V2Q96R30 315 aa2.57□□□□□ -2
SPCS3-202ENST00000507001 GABARAPL1Q9H0R8 117 aa2.57□□□□□ -2
SPCS3-202ENST00000507001 C1orf109Q9NX04 203 aa2.57□□□□□ -2
SPCS3-202ENST00000507001 ZNF230Q9UIE0 474 aaPredicted RBP2.57□□□□□ -2
SPCS3-202ENST00000507001 PLXNB3Q9ULL4 1909 aa2.57□□□□□ -2
SPCS3-202ENST00000507001 NOS1P29475 1434 aa2.57□□□□□ -2
SPCS3-202ENST00000507001 IGHV1-45A0A0A0MS14 117 aa2.56□□□□□ -2
SPCS3-202ENST00000507001 GOLGA6L4A6NEF3 574 aa2.56□□□□□ -2
SPCS3-202ENST00000507001 ADAP1O75689 374 aa2.56□□□□□ -2
SPCS3-202ENST00000507001 RAB36O95755 333 aa2.56□□□□□ -2
SPCS3-202ENST00000507001 RNASE2P10153 161 aaKnown RBP2.56□□□□□ -2
SPCS3-202ENST00000507001 PTHLHP12272 177 aa2.56□□□□□ -2
SPCS3-202ENST00000507001 CNTFRP26992 372 aa2.56□□□□□ -2
SPCS3-202ENST00000507001 CBX5P45973 191 aa2.56□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms