RNA–Protein interactions for RNA: ENST00000506880.5

PDGFC-205, Transcript of platelet derived growth factor C, humanhuman

TSL 2

Gene PDGFC, Length 1,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-205ENST00000506880 CRTAPO75718 401 aaPredicted RBP6.99□□□□□ -1.29
PDGFC-205ENST00000506880 CDRT1O95170 752 aa6.99□□□□□ -1.29
PDGFC-205ENST00000506880 FSHBP01225 129 aa6.99□□□□□ -1.29
PDGFC-205ENST00000506880 ZNF728P0DKX0 622 aa6.99□□□□□ -1.29
PDGFC-205ENST00000506880 NDUFB7P17568 137 aa6.99□□□□□ -1.29
PDGFC-205ENST00000506880 GABRR1P24046 479 aa6.99□□□□□ -1.29
PDGFC-205ENST00000506880 ZFP36P26651 326 aaKnown RBP6.99□□□□□ -1.29
PDGFC-205ENST00000506880 CD34P28906 385 aa6.99□□□□□ -1.29
PDGFC-205ENST00000506880 IL2RGP31785 369 aa6.99□□□□□ -1.29
PDGFC-205ENST00000506880 SDC2P34741 201 aa6.99□□□□□ -1.29
PDGFC-205ENST00000506880 OR3A1P47881 315 aa6.99□□□□□ -1.29
PDGFC-205ENST00000506880 RORCP51449 518 aa6.99□□□□□ -1.29
PDGFC-205ENST00000506880 RPL15P61313 204 aaKnown RBP6.99□□□□□ -1.29
PDGFC-205ENST00000506880 LCN2P80188 198 aa6.99□□□□□ -1.29
PDGFC-205ENST00000506880 TUSC1Q2TAM9 212 aa6.99□□□□□ -1.29
PDGFC-205ENST00000506880 C2orf76Q3KRA6 126 aa6.99□□□□□ -1.29
PDGFC-205ENST00000506880 MIDNQ504T8 468 aa6.99□□□□□ -1.29
PDGFC-205ENST00000506880 PAN3Q58A45 887 aaKnown RBP6.99□□□□□ -1.29
PDGFC-205ENST00000506880 FAM201AQ5SY85 155 aa6.99□□□□□ -1.29
PDGFC-205ENST00000506880 MZT2AQ6P582 158 aa6.99□□□□□ -1.29
PDGFC-205ENST00000506880 LYPD2Q6UXB3 125 aa6.99□□□□□ -1.29
PDGFC-205ENST00000506880 HEPN1Q6WQI6 88 aa6.99□□□□□ -1.29
PDGFC-205ENST00000506880 Q6ZS49 121 aa6.99□□□□□ -1.29
PDGFC-205ENST00000506880 FAM216BQ8N7L0 139 aa6.99□□□□□ -1.29
PDGFC-205ENST00000506880 ZNRF1Q8ND25 227 aa6.99□□□□□ -1.29
PDGFC-205ENST00000506880 ZFAND2BQ8WV99 257 aa6.99□□□□□ -1.29
PDGFC-205ENST00000506880 ZDHHC16Q969W1 377 aa6.99□□□□□ -1.29
PDGFC-205ENST00000506880 RFT1Q96AA3 541 aa6.99□□□□□ -1.29
PDGFC-205ENST00000506880 PHF21AQ96BD5 680 aa6.99□□□□□ -1.29
PDGFC-205ENST00000506880 ZNF714Q96N38 554 aa6.99□□□□□ -1.29
PDGFC-205ENST00000506880 WDFY2Q96P53 400 aa6.99□□□□□ -1.29
PDGFC-205ENST00000506880 JMJD8Q96S16 334 aa6.99□□□□□ -1.29
PDGFC-205ENST00000506880 DPCDQ9BVM2 203 aaPredicted RBP6.99□□□□□ -1.29
PDGFC-205ENST00000506880 TMPRSS13Q9BYE2 586 aa6.99□□□□□ -1.29
PDGFC-205ENST00000506880 SELENOIQ9C0D9 397 aa6.99□□□□□ -1.29
PDGFC-205ENST00000506880 ABCG5Q9H222 651 aa6.99□□□□□ -1.29
PDGFC-205ENST00000506880 OR51E2Q9H255 320 aa6.99□□□□□ -1.29
PDGFC-205ENST00000506880 C7orf69Q9H7B7 122 aa6.99□□□□□ -1.29
PDGFC-205ENST00000506880 LIN7BQ9HAP6 207 aa6.99□□□□□ -1.29
PDGFC-205ENST00000506880 OR14J1Q9UGF5 321 aa6.99□□□□□ -1.29
PDGFC-205ENST00000506880 AK6Q9Y3D8 172 aaKnown RBP6.99□□□□□ -1.29
PDGFC-205ENST00000506880 SETD2Q9BYW2 2564 aaPredicted RBP6.98□□□□□ -1.29
PDGFC-205ENST00000506880 IGHV3OR15-7A0A075B7D8 119 aa6.98□□□□□ -1.29
PDGFC-205ENST00000506880 TRAV24A0A0B4J272 114 aa6.98□□□□□ -1.29
PDGFC-205ENST00000506880 IGHV3-64DA0A0J9YX35 117 aa6.98□□□□□ -1.29
PDGFC-205ENST00000506880 LOC100506127A0A0U1RQW1 187 aa6.98□□□□□ -1.29
PDGFC-205ENST00000506880 A0A1W2PQ09 198 aa6.98□□□□□ -1.29
PDGFC-205ENST00000506880 ODAMA1E959 279 aa6.98□□□□□ -1.29
PDGFC-205ENST00000506880 F8VVB4 439 aa6.98□□□□□ -1.29
PDGFC-205ENST00000506880 F8VWA3 439 aa6.98□□□□□ -1.29
PDGFC-205ENST00000506880 GEMIN2O14893 280 aaKnown RBP6.98□□□□□ -1.29
PDGFC-205ENST00000506880 PSPNO60542 156 aa6.98□□□□□ -1.29
PDGFC-205ENST00000506880 TOX4O94842 621 aa6.98□□□□□ -1.29
PDGFC-205ENST00000506880 PLATP00750 562 aa6.98□□□□□ -1.29
PDGFC-205ENST00000506880 GSTP1P09211 210 aaKnown RBP6.98□□□□□ -1.29
PDGFC-205ENST00000506880 MMP9P14780 707 aa6.98□□□□□ -1.29
PDGFC-205ENST00000506880 ZNF16P17020 682 aaPredicted RBP6.98□□□□□ -1.29
PDGFC-205ENST00000506880 CHATP28329 748 aa6.98□□□□□ -1.29
PDGFC-205ENST00000506880 UBE2E1P51965 193 aa6.98□□□□□ -1.29
PDGFC-205ENST00000506880 ARHGDIBP52566 201 aa6.98□□□□□ -1.29
PDGFC-205ENST00000506880 RIPPLY3P57055 190 aa6.98□□□□□ -1.29
PDGFC-205ENST00000506880 INSL4Q14641 139 aa6.98□□□□□ -1.29
PDGFC-205ENST00000506880 CTF1Q16619 201 aa6.98□□□□□ -1.29
PDGFC-205ENST00000506880 PNLIPRP3Q17RR3 467 aa6.98□□□□□ -1.29
PDGFC-205ENST00000506880 KRBOX4Q5JUW0 171 aa6.98□□□□□ -1.29
PDGFC-205ENST00000506880 MINOS1Q5TGZ0 78 aa6.98□□□□□ -1.29
PDGFC-205ENST00000506880 GPR157Q5UAW9 335 aa6.98□□□□□ -1.29
PDGFC-205ENST00000506880 ZNF497Q6ZNH5 498 aa6.98□□□□□ -1.29
PDGFC-205ENST00000506880 TMEM86BQ8N661 226 aa6.98□□□□□ -1.29
PDGFC-205ENST00000506880 SUMF2Q8NBJ7 301 aa6.98□□□□□ -1.29
PDGFC-205ENST00000506880 OR13D1Q8NGV5 346 aa6.98□□□□□ -1.29
PDGFC-205ENST00000506880 FAM46BQ96A09 425 aa6.98□□□□□ -1.29
PDGFC-205ENST00000506880 ZNF488Q96MN9 340 aa6.98□□□□□ -1.29
PDGFC-205ENST00000506880 GFI1Q99684 422 aa6.98□□□□□ -1.29
PDGFC-205ENST00000506880 BEX2Q9BXY8 128 aa6.98□□□□□ -1.29
PDGFC-205ENST00000506880 CHST6Q9GZX3 395 aa6.98□□□□□ -1.29
PDGFC-205ENST00000506880 SIRPDQ9H106 197 aa6.98□□□□□ -1.29
PDGFC-205ENST00000506880 LPAR5Q9H1C0 372 aa6.98□□□□□ -1.29
PDGFC-205ENST00000506880 DCSTAMPQ9H295 470 aa6.98□□□□□ -1.29
PDGFC-205ENST00000506880 PRDM13Q9H4Q3 707 aa6.98□□□□□ -1.29
PDGFC-205ENST00000506880 NARFLQ9H6Q4 476 aa6.98□□□□□ -1.29
PDGFC-205ENST00000506880 DIABLOQ9NR28 239 aa6.98□□□□□ -1.29
PDGFC-205ENST00000506880 YAE1D1Q9NRH1 226 aa6.98□□□□□ -1.29
PDGFC-205ENST00000506880 MBNL3Q9NUK0 354 aaKnown RBP6.98□□□□□ -1.29
PDGFC-205ENST00000506880 PLEKHJ1Q9NW61 149 aa6.98□□□□□ -1.29
PDGFC-205ENST00000506880 CCDC59Q9P031 241 aaKnown RBP6.98□□□□□ -1.29
PDGFC-205ENST00000506880 NUP50Q9UKX7 468 aa6.98□□□□□ -1.29
PDGFC-205ENST00000506880 TBL2Q9Y4P3 447 aaKnown RBP6.98□□□□□ -1.29
PDGFC-205ENST00000506880 MINOS1-NBL1R4GNA1 71 aa6.98□□□□□ -1.29
PDGFC-205ENST00000506880 KBTBD11-OT1A0A1B0GTJ5 212 aa6.97□□□□□ -1.29
PDGFC-205ENST00000506880 TMEM82A0PJX8 343 aa6.97□□□□□ -1.29
PDGFC-205ENST00000506880 OOSP1A8MZH6 123 aa6.97□□□□□ -1.29
PDGFC-205ENST00000506880 C22orf46C9J442 243 aa6.97□□□□□ -1.29
PDGFC-205ENST00000506880 NPIPB11E5RHQ5 1161 aa6.97□□□□□ -1.29
PDGFC-205ENST00000506880 ITGB1BP1O14713 200 aa6.97□□□□□ -1.29
PDGFC-205ENST00000506880 PHF1O43189 567 aaPredicted RBP6.97□□□□□ -1.29
PDGFC-205ENST00000506880 CLPXO76031 633 aa6.97□□□□□ -1.29
PDGFC-205ENST00000506880 RGS11O94810 467 aa6.97□□□□□ -1.29
PDGFC-205ENST00000506880 ZNF205O95201 554 aa6.97□□□□□ -1.29
PDGFC-205ENST00000506880 MPIG6BO95866 241 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 106.9 ms