RNA–Protein interactions for RNA: ENST00000506783.5

PHF3-208, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best)

Gene PHF3, Length 3,700 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-208ENST00000506783 MKXQ8IYA7 352 aa8.32□□□□□ -1.08
PHF3-208ENST00000506783 CLDN23Q96B33 292 aa8.32□□□□□ -1.08
PHF3-208ENST00000506783 FAM117AQ9C073 453 aa8.32□□□□□ -1.08
PHF3-208ENST00000506783 TLN2Q9Y4G6 2542 aa8.32□□□□□ -1.08
PHF3-208ENST00000506783 TANC2Q9HCD6 1990 aa8.31□□□□□ -1.08
PHF3-208ENST00000506783 LYZL6O75951 148 aa8.31□□□□□ -1.08
PHF3-208ENST00000506783 PTAFRP25105 342 aa8.31□□□□□ -1.08
PHF3-208ENST00000506783 GSK3AP49840 483 aa8.31□□□□□ -1.08
PHF3-208ENST00000506783 WDR25Q64LD2 544 aaPredicted RBP8.31□□□□□ -1.08
PHF3-208ENST00000506783 RABEPKQ7Z6M1 372 aa8.31□□□□□ -1.08
PHF3-208ENST00000506783 LINC00518Q8N0U6 118 aa8.31□□□□□ -1.08
PHF3-208ENST00000506783 OR6X1Q8NH79 312 aa8.31□□□□□ -1.08
PHF3-208ENST00000506783 CPT1CQ8TCG5 803 aa8.31□□□□□ -1.08
PHF3-208ENST00000506783 DNASE2BQ8WZ79 361 aa8.31□□□□□ -1.08
PHF3-208ENST00000506783 OBP2BQ9NPH6 170 aa8.31□□□□□ -1.08
PHF3-208ENST00000506783 IGKV1-12A0A0C4DH73 117 aa8.31□□□□□ -1.08
PHF3-208ENST00000506783 MSTNO14793 375 aa8.31□□□□□ -1.08
PHF3-208ENST00000506783 SPINK4O60575 86 aa8.31□□□□□ -1.08
PHF3-208ENST00000506783 IGKV1D-12P01611 117 aa8.31□□□□□ -1.08
PHF3-208ENST00000506783 CD74P04233 296 aa8.31□□□□□ -1.08
PHF3-208ENST00000506783 ADIRFQ15847 76 aa8.31□□□□□ -1.08
PHF3-208ENST00000506783 TBC1D26Q86UD7 250 aa8.31□□□□□ -1.08
PHF3-208ENST00000506783 CMTM1Q8IZ96 169 aa8.31□□□□□ -1.08
PHF3-208ENST00000506783 SCGB1C1Q8TD33 95 aa8.31□□□□□ -1.08
PHF3-208ENST00000506783 NTNG2Q96CW9 530 aa8.31□□□□□ -1.08
PHF3-208ENST00000506783 PFDN5Q99471 154 aa8.31□□□□□ -1.08
PHF3-208ENST00000506783 OCSTAMPQ9BR26 566 aa8.31□□□□□ -1.08
PHF3-208ENST00000506783 SMCO4Q9NRQ5 59 aa8.31□□□□□ -1.08
PHF3-208ENST00000506783 C19orf12Q9NSK7 152 aa8.31□□□□□ -1.08
PHF3-208ENST00000506783 LOXL2Q9Y4K0 774 aa8.31□□□□□ -1.08
PHF3-208ENST00000506783 MFNGO00587 321 aa8.31□□□□□ -1.08
PHF3-208ENST00000506783 DYNLT3P51808 116 aa8.31□□□□□ -1.08
PHF3-208ENST00000506783 ZNF826PQ6ZT77 177 aa8.31□□□□□ -1.08
PHF3-208ENST00000506783 PLPP5Q8NEB5 264 aa8.31□□□□□ -1.08
PHF3-208ENST00000506783 FRZBQ92765 325 aa8.31□□□□□ -1.08
PHF3-208ENST00000506783 CRIM1Q9NZV1 1036 aa8.31□□□□□ -1.08
PHF3-208ENST00000506783 ATPIF1Q9UII2 106 aa8.31□□□□□ -1.08
PHF3-208ENST00000506783 TNRC18O15417 2968 aaPredicted RBP8.3□□□□□ -1.08
PHF3-208ENST00000506783 A0A1W2PQD3 144 aa8.3□□□□□ -1.08
PHF3-208ENST00000506783 SLC34A2O95436 690 aa8.3□□□□□ -1.08
PHF3-208ENST00000506783 CALCRP30988 508 aa8.3□□□□□ -1.08
PHF3-208ENST00000506783 ENDOGQ14249 297 aaKnown RBP8.3□□□□□ -1.08
PHF3-208ENST00000506783 ALX4Q9H161 411 aaPredicted RBP8.3□□□□□ -1.08
PHF3-208ENST00000506783 C12orf10Q9HB07 376 aa8.3□□□□□ -1.08
PHF3-208ENST00000506783 WFDC1Q9HC57 220 aa8.3□□□□□ -1.08
PHF3-208ENST00000506783 RAB18Q9NP72 206 aa8.3□□□□□ -1.08
PHF3-208ENST00000506783 SLC17A5Q9NRA2 495 aa8.3□□□□□ -1.08
PHF3-208ENST00000506783 MMP26Q9NRE1 261 aa8.3□□□□□ -1.08
PHF3-208ENST00000506783 WASF3Q9UPY6 502 aa8.3□□□□□ -1.08
PHF3-208ENST00000506783 GAB2Q9UQC2 676 aa8.3□□□□□ -1.08
PHF3-208ENST00000506783 STARD10Q9Y365 291 aa8.3□□□□□ -1.08
PHF3-208ENST00000506783 CHCHD2Q9Y6H1 151 aaPredicted RBP8.3□□□□□ -1.08
PHF3-208ENST00000506783 AQP7P3A6NL99 342 aa8.3□□□□□ -1.08
PHF3-208ENST00000506783 LILRA1O75019 489 aa8.3□□□□□ -1.08
PHF3-208ENST00000506783 JTBO76095 146 aa8.3□□□□□ -1.08
PHF3-208ENST00000506783 ALDH3B1P43353 468 aa8.3□□□□□ -1.08
PHF3-208ENST00000506783 ERVS71-1P61550 626 aa8.3□□□□□ -1.08
PHF3-208ENST00000506783 FLI1Q01543 452 aaPredicted RBP8.3□□□□□ -1.08
PHF3-208ENST00000506783 ACER2Q5QJU3 275 aa8.3□□□□□ -1.08
PHF3-208ENST00000506783 RHOVQ96L33 236 aa8.3□□□□□ -1.08
PHF3-208ENST00000506783 MRPL13Q9BYD1 178 aaKnown RBP8.3□□□□□ -1.08
PHF3-208ENST00000506783 BCO1Q9HAY6 547 aa8.3□□□□□ -1.08
PHF3-208ENST00000506783 RCC2Q9P258 522 aaKnown RBP8.3□□□□□ -1.08
PHF3-208ENST00000506783 LINC00587B1AMM8 73 aa8.3□□□□□ -1.08
PHF3-208ENST00000506783 CDIPTO14735 213 aa8.3□□□□□ -1.08
PHF3-208ENST00000506783 RHBDL1O75783 438 aa8.3□□□□□ -1.08
PHF3-208ENST00000506783 AGFG2O95081 481 aa8.3□□□□□ -1.08
PHF3-208ENST00000506783 FCGR3AP08637 254 aa8.3□□□□□ -1.08
PHF3-208ENST00000506783 EIF1P41567 113 aaKnown RBP8.3□□□□□ -1.08
PHF3-208ENST00000506783 CNN3Q15417 329 aaKnown RBP8.3□□□□□ -1.08
PHF3-208ENST00000506783 TRIP6Q15654 476 aaKnown RBP8.3□□□□□ -1.08
PHF3-208ENST00000506783 SLC25A47Q6Q0C1 308 aa8.3□□□□□ -1.08
PHF3-208ENST00000506783 SAP25Q8TEE9 199 aa8.3□□□□□ -1.08
PHF3-208ENST00000506783 PRO3102Q9H379 93 aa8.3□□□□□ -1.08
PHF3-208ENST00000506783 MIOXQ9UGB7 285 aa8.3□□□□□ -1.08
PHF3-208ENST00000506783 SONP18583 2426 aaKnown RBP8.3□□□□□ -1.08
PHF3-208ENST00000506783 PTPRSQ13332 1948 aa8.3□□□□□ -1.08
PHF3-208ENST00000506783 CUBNO60494 3623 aa8.29□□□□□ -1.08
PHF3-208ENST00000506783 SYNGR4O95473 234 aa8.29□□□□□ -1.08
PHF3-208ENST00000506783 PPYP01298 95 aa8.29□□□□□ -1.08
PHF3-208ENST00000506783 CSRP1P21291 193 aaKnown RBP8.29□□□□□ -1.08
PHF3-208ENST00000506783 ATP6V0CP27449 155 aa8.29□□□□□ -1.08
PHF3-208ENST00000506783 GABRA2P47869 451 aa8.29□□□□□ -1.08
PHF3-208ENST00000506783 DEGS2Q6QHC5 323 aa8.29□□□□□ -1.08
PHF3-208ENST00000506783 DPPA2Q7Z7J5 298 aa8.29□□□□□ -1.08
PHF3-208ENST00000506783 CYB561D1Q8N8Q1 229 aa8.29□□□□□ -1.08
PHF3-208ENST00000506783 NFAM1Q8NET5 270 aaPredicted RBP8.29□□□□□ -1.08
PHF3-208ENST00000506783 OR10D4PQ8NGN7 298 aa8.29□□□□□ -1.08
PHF3-208ENST00000506783 WBP1Q96G27 269 aa8.29□□□□□ -1.08
PHF3-208ENST00000506783 ZNF552Q9H707 407 aaPredicted RBP8.29□□□□□ -1.08
PHF3-208ENST00000506783 CYTL1Q9NRR1 136 aa8.29□□□□□ -1.08
PHF3-208ENST00000506783 C3orf85A0A1B0GTC6 90 aa8.29□□□□□ -1.08
PHF3-208ENST00000506783 PINLYPA6NC86 204 aa8.29□□□□□ -1.08
PHF3-208ENST00000506783 CD300LBA8K4G0 201 aa8.29□□□□□ -1.08
PHF3-208ENST00000506783 CST4P01036 141 aa8.29□□□□□ -1.08
PHF3-208ENST00000506783 CD8AP01732 235 aa8.29□□□□□ -1.08
PHF3-208ENST00000506783 ISG15P05161 165 aa8.29□□□□□ -1.08
PHF3-208ENST00000506783 SULT1A1P50225 295 aa8.29□□□□□ -1.08
PHF3-208ENST00000506783 CCL11P51671 97 aa8.29□□□□□ -1.08
PHF3-208ENST00000506783 CST9LP1Q5W188 147 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms