RNA–Protein interactions for RNA: ENST00000506632.2

PDLIM5-209, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-209ENST00000506632 OR2T6Q8NHC8 308 aa7.3□□□□□ -1.24
PDLIM5-209ENST00000506632 WIPF2Q8TF74 440 aaPredicted RBP7.3□□□□□ -1.24
PDLIM5-209ENST00000506632 TNFAIP8L1Q8WVP5 186 aa7.3□□□□□ -1.24
PDLIM5-209ENST00000506632 CYGBQ8WWM9 190 aa7.3□□□□□ -1.24
PDLIM5-209ENST00000506632 GGHQ92820 318 aa7.3□□□□□ -1.24
PDLIM5-209ENST00000506632 CPNE2Q96FN4 548 aaPredicted RBP7.3□□□□□ -1.24
PDLIM5-209ENST00000506632 TMEM80Q96HE8 168 aa7.3□□□□□ -1.24
PDLIM5-209ENST00000506632 PGLYRP3Q96LB9 341 aa7.3□□□□□ -1.24
PDLIM5-209ENST00000506632 GAL3ST2Q9H3Q3 398 aa7.3□□□□□ -1.24
PDLIM5-209ENST00000506632 LINC00574Q9H8X3 128 aa7.3□□□□□ -1.24
PDLIM5-209ENST00000506632 IL36GQ9NZH8 169 aa7.3□□□□□ -1.24
PDLIM5-209ENST00000506632 PITPNC1Q9UKF7 332 aa7.3□□□□□ -1.24
PDLIM5-209ENST00000506632 ZNF281Q9Y2X9 895 aa7.3□□□□□ -1.24
PDLIM5-209ENST00000506632 HSPE1-MOB4S4R3N1 261 aa7.3□□□□□ -1.24
PDLIM5-209ENST00000506632 TET2Q6N021 2002 aaPredicted RBP7.29□□□□□ -1.24
PDLIM5-209ENST00000506632 ZNF729A6NN14 1252 aaPredicted RBP7.29□□□□□ -1.24
PDLIM5-209ENST00000506632 H0YJX3 145 aa7.29□□□□□ -1.24
PDLIM5-209ENST00000506632 MAGEB3O15480 346 aa7.29□□□□□ -1.24
PDLIM5-209ENST00000506632 GPX5O75715 221 aa7.29□□□□□ -1.24
PDLIM5-209ENST00000506632 GNAO1P09471 354 aa7.29□□□□□ -1.24
PDLIM5-209ENST00000506632 MYL12AP19105 171 aa7.29□□□□□ -1.24
PDLIM5-209ENST00000506632 HTR1DP28221 377 aa7.29□□□□□ -1.24
PDLIM5-209ENST00000506632 CAPGP40121 348 aa7.29□□□□□ -1.24
PDLIM5-209ENST00000506632 PTGFRP43088 359 aa7.29□□□□□ -1.24
PDLIM5-209ENST00000506632 OR3A4PP47883 348 aa7.29□□□□□ -1.24
PDLIM5-209ENST00000506632 RPS11P62280 158 aaKnown RBP eCLIP7.29□□□□□ -1.24
PDLIM5-209ENST00000506632 SCN1BQ07699 218 aa7.29□□□□□ -1.24
PDLIM5-209ENST00000506632 ATXN7L3Q14CW9 347 aaPredicted RBP7.29□□□□□ -1.24
PDLIM5-209ENST00000506632 KRBOX4Q5JUW0 171 aa7.29□□□□□ -1.24
PDLIM5-209ENST00000506632 UTF1Q5T230 341 aa7.29□□□□□ -1.24
PDLIM5-209ENST00000506632 RSBN1Q5VWQ0 802 aaPredicted RBP7.29□□□□□ -1.24
PDLIM5-209ENST00000506632 ABHD12Q8N2K0 398 aa7.29□□□□□ -1.24
PDLIM5-209ENST00000506632 KLHDC1Q8N7A1 406 aa7.29□□□□□ -1.24
PDLIM5-209ENST00000506632 DTX3Q8N9I9 347 aa7.29□□□□□ -1.24
PDLIM5-209ENST00000506632 OR13C5Q8NGS8 318 aa7.29□□□□□ -1.24
PDLIM5-209ENST00000506632 OR10K1Q8NGX5 313 aa7.29□□□□□ -1.24
PDLIM5-209ENST00000506632 NDNFQ8TB73 568 aa7.29□□□□□ -1.24
PDLIM5-209ENST00000506632 GHSRQ92847 366 aa7.29□□□□□ -1.24
PDLIM5-209ENST00000506632 NKX3-1Q99801 234 aaPredicted RBP7.29□□□□□ -1.24
PDLIM5-209ENST00000506632 PPIL3Q9H2H8 161 aaKnown RBP7.29□□□□□ -1.24
PDLIM5-209ENST00000506632 IFT22Q9H7X7 185 aa7.29□□□□□ -1.24
PDLIM5-209ENST00000506632 ZNF286AQ9HBT8 521 aa7.29□□□□□ -1.24
PDLIM5-209ENST00000506632 TMEM138Q9NPI0 162 aa7.29□□□□□ -1.24
PDLIM5-209ENST00000506632 ABCB10Q9NRK6 738 aa7.29□□□□□ -1.24
PDLIM5-209ENST00000506632 SERTAD4Q9NUC0 356 aa7.29□□□□□ -1.24
PDLIM5-209ENST00000506632 PLCXD1Q9NUJ7 323 aa7.29□□□□□ -1.24
PDLIM5-209ENST00000506632 CNOT2Q9NZN8 540 aaKnown RBP7.29□□□□□ -1.24
PDLIM5-209ENST00000506632 OR6C3Q9NZP0 311 aa7.29□□□□□ -1.24
PDLIM5-209ENST00000506632 DPM3Q9P2X0 92 aa7.29□□□□□ -1.24
PDLIM5-209ENST00000506632 FOXJ3Q9UPW0 622 aa7.29□□□□□ -1.24
PDLIM5-209ENST00000506632 HILPDAQ9Y5L2 63 aa7.29□□□□□ -1.24
PDLIM5-209ENST00000506632 TRBV5-7A0A0A0MS05 114 aa7.28□□□□□ -1.24
PDLIM5-209ENST00000506632 KBTBD11-OT1A0A1B0GTJ5 212 aa7.28□□□□□ -1.24
PDLIM5-209ENST00000506632 EFCAB10A6NFE3 127 aa7.28□□□□□ -1.24
PDLIM5-209ENST00000506632 LY6LH3BQJ8 138 aa7.28□□□□□ -1.24
PDLIM5-209ENST00000506632 F2RL2O00254 374 aa7.28□□□□□ -1.24
PDLIM5-209ENST00000506632 CDRT1O95170 752 aa7.28□□□□□ -1.24
PDLIM5-209ENST00000506632 FSTP19883 344 aa7.28□□□□□ -1.24
PDLIM5-209ENST00000506632 BDKRB2P30411 391 aa7.28□□□□□ -1.24
PDLIM5-209ENST00000506632 KCNJ3P48549 501 aa7.28□□□□□ -1.24
PDLIM5-209ENST00000506632 RBM11P57052 281 aaKnown RBP7.28□□□□□ -1.24
PDLIM5-209ENST00000506632 SLC34A1Q06495 639 aa7.28□□□□□ -1.24
PDLIM5-209ENST00000506632 ST3GAL4Q11206 333 aa7.28□□□□□ -1.24
PDLIM5-209ENST00000506632 DOC2BQ14184 412 aa7.28□□□□□ -1.24
PDLIM5-209ENST00000506632 HABP2Q14520 560 aaPredicted RBP7.28□□□□□ -1.24
PDLIM5-209ENST00000506632 RSU1Q15404 277 aa7.28□□□□□ -1.24
PDLIM5-209ENST00000506632 C2orf68Q2NKX9 166 aa7.28□□□□□ -1.24
PDLIM5-209ENST00000506632 HLA-DRB5Q30154 266 aa7.28□□□□□ -1.24
PDLIM5-209ENST00000506632 PIGYQ3MUY2 71 aa7.28□□□□□ -1.24
PDLIM5-209ENST00000506632 Q499Y3 187 aa7.28□□□□□ -1.24
PDLIM5-209ENST00000506632 PAN3Q58A45 887 aaKnown RBP7.28□□□□□ -1.24
PDLIM5-209ENST00000506632 YIF1BQ5BJH7 314 aa7.28□□□□□ -1.24
PDLIM5-209ENST00000506632 DDI2Q5TDH0 399 aa7.28□□□□□ -1.24
PDLIM5-209ENST00000506632 SAMD5Q5TGI4 173 aa7.28□□□□□ -1.24
PDLIM5-209ENST00000506632 Q6ZTK2 550 aa7.28□□□□□ -1.24
PDLIM5-209ENST00000506632 SATL1Q86VE3 508 aa7.28□□□□□ -1.24
PDLIM5-209ENST00000506632 TMEM219Q86XT9 240 aa7.28□□□□□ -1.24
PDLIM5-209ENST00000506632 C8orf59Q8N0T1 100 aaPredicted RBP7.28□□□□□ -1.24
PDLIM5-209ENST00000506632 LINC00528Q8N1L1 170 aa7.28□□□□□ -1.24
PDLIM5-209ENST00000506632 OR4D6Q8NGJ1 314 aa7.28□□□□□ -1.24
PDLIM5-209ENST00000506632 OR13A1Q8NGR1 328 aa7.28□□□□□ -1.24
PDLIM5-209ENST00000506632 PLPPR1Q8TBJ4 325 aa7.28□□□□□ -1.24
PDLIM5-209ENST00000506632 ZNF596Q8TC21 504 aa7.28□□□□□ -1.24
PDLIM5-209ENST00000506632 ORAI1Q96D31 301 aa7.28□□□□□ -1.24
PDLIM5-209ENST00000506632 KIRREL1Q96J84 757 aa7.28□□□□□ -1.24
PDLIM5-209ENST00000506632 NR1H4Q96RI1 486 aaPredicted RBP7.28□□□□□ -1.24
PDLIM5-209ENST00000506632 GPER1Q99527 375 aa7.28□□□□□ -1.24
PDLIM5-209ENST00000506632 WNT10AQ9GZT5 417 aa7.28□□□□□ -1.24
PDLIM5-209ENST00000506632 FKBP14Q9NWM8 211 aa7.28□□□□□ -1.24
PDLIM5-209ENST00000506632 ZNF581Q9P0T4 197 aa7.28□□□□□ -1.24
PDLIM5-209ENST00000506632 PSORS1C1Q9UIG5 152 aa7.28□□□□□ -1.24
PDLIM5-209ENST00000506632 KIF25Q9UIL4 384 aa7.28□□□□□ -1.24
PDLIM5-209ENST00000506632 TRAV8-7A0A075B6U6 113 aa7.27□□□□□ -1.25
PDLIM5-209ENST00000506632 FAM172BPA6NC97 362 aa7.27□□□□□ -1.25
PDLIM5-209ENST00000506632 MAGEA13PA6NCF6 341 aa7.27□□□□□ -1.25
PDLIM5-209ENST00000506632 NPIPB11E5RHQ5 1161 aa7.27□□□□□ -1.25
PDLIM5-209ENST00000506632 BUB1B-PAK6H3BSN5 160 aa7.27□□□□□ -1.25
PDLIM5-209ENST00000506632 XPNPEP2O43895 674 aa7.27□□□□□ -1.25
PDLIM5-209ENST00000506632 HTR3BO95264 441 aa7.27□□□□□ -1.25
PDLIM5-209ENST00000506632 IL1AP01583 271 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms