RNA–Protein interactions for RNA: ENST00000506233.5

SCLT1-207, Transcript of sodium channel and clathrin linker 1, humanhuman

TSL 2

Gene SCLT1, Length 3,673 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-207ENST00000506233 ZNF107Q9UII5 783 aaPredicted RBP4.95□□□□□ -1.62
SCLT1-207ENST00000506233 ZFHX2Q9C0A1 2572 aaPredicted RBP4.95□□□□□ -1.62
SCLT1-207ENST00000506233 IGKV3-15P01624 115 aa4.94□□□□□ -1.62
SCLT1-207ENST00000506233 S100A9P06702 114 aaKnown RBP4.94□□□□□ -1.62
SCLT1-207ENST00000506233 IFNA8P32881 189 aa4.94□□□□□ -1.62
SCLT1-207ENST00000506233 NKX2-1P43699 371 aaPredicted RBP4.94□□□□□ -1.62
SCLT1-207ENST00000506233 TMPRSS3P57727 454 aa4.94□□□□□ -1.62
SCLT1-207ENST00000506233 SNRPD2P62316 118 aaKnown RBP4.94□□□□□ -1.62
SCLT1-207ENST00000506233 SLC10A1Q14973 349 aa4.94□□□□□ -1.62
SCLT1-207ENST00000506233 TEX261Q6UWH6 196 aa4.94□□□□□ -1.62
SCLT1-207ENST00000506233 FAM57BQ71RH2 274 aa4.94□□□□□ -1.62
SCLT1-207ENST00000506233 C9orf106Q8NAJ2 232 aa4.94□□□□□ -1.62
SCLT1-207ENST00000506233 OR10AD1Q8NGE0 317 aa4.94□□□□□ -1.62
SCLT1-207ENST00000506233 OR10R2Q8NGX6 335 aa4.94□□□□□ -1.62
SCLT1-207ENST00000506233 RBMXL1Q96E39 390 aaKnown RBP4.94□□□□□ -1.62
SCLT1-207ENST00000506233 SSX3Q99909 188 aa4.94□□□□□ -1.62
SCLT1-207ENST00000506233 PECRQ9BY49 303 aa4.94□□□□□ -1.62
SCLT1-207ENST00000506233 TMEM9BQ9NQ34 198 aa4.94□□□□□ -1.62
SCLT1-207ENST00000506233 OR14J1Q9UGF5 321 aa4.94□□□□□ -1.62
SCLT1-207ENST00000506233 HHLA2Q9UM44 414 aa4.94□□□□□ -1.62
SCLT1-207ENST00000506233 U3KQ87 197 aa4.94□□□□□ -1.62
SCLT1-207ENST00000506233 A6NNC1 897 aa4.94□□□□□ -1.62
SCLT1-207ENST00000506233 MLNRO43193 412 aa4.94□□□□□ -1.62
SCLT1-207ENST00000506233 CYB561P49447 251 aa4.94□□□□□ -1.62
SCLT1-207ENST00000506233 TMED10P49755 219 aaKnown RBP4.94□□□□□ -1.62
SCLT1-207ENST00000506233 BLVRAP53004 296 aa4.94□□□□□ -1.62
SCLT1-207ENST00000506233 CEACAM16Q2WEN9 425 aa4.94□□□□□ -1.62
SCLT1-207ENST00000506233 DHRS11Q6UWP2 260 aa4.94□□□□□ -1.62
SCLT1-207ENST00000506233 ANGPTL5Q86XS5 388 aa4.94□□□□□ -1.62
SCLT1-207ENST00000506233 OR13C9Q8NGT0 318 aa4.94□□□□□ -1.62
SCLT1-207ENST00000506233 BANF2Q9H503 90 aa4.94□□□□□ -1.62
SCLT1-207ENST00000506233 MARCH11A6NNE9 402 aa4.94□□□□□ -1.62
SCLT1-207ENST00000506233 ARPC1BO15143 372 aaKnown RBP4.94□□□□□ -1.62
SCLT1-207ENST00000506233 PROP1O75360 226 aa4.94□□□□□ -1.62
SCLT1-207ENST00000506233 SIX6O95475 246 aa4.94□□□□□ -1.62
SCLT1-207ENST00000506233 IGHV3-9P01782 118 aa4.94□□□□□ -1.62
SCLT1-207ENST00000506233 HNF1AP20823 631 aa4.94□□□□□ -1.62
SCLT1-207ENST00000506233 BDKRB2P30411 391 aa4.94□□□□□ -1.62
SCLT1-207ENST00000506233 RAB35Q15286 201 aa4.94□□□□□ -1.62
SCLT1-207ENST00000506233 VAX1Q5SQQ9 334 aa4.94□□□□□ -1.62
SCLT1-207ENST00000506233 TMEM69Q5SWH9 247 aa4.94□□□□□ -1.62
SCLT1-207ENST00000506233 Q6ZS49 121 aa4.94□□□□□ -1.62
SCLT1-207ENST00000506233 ZNF676Q8N7Q3 588 aa4.94□□□□□ -1.62
SCLT1-207ENST00000506233 LINC00469Q8N7U9 141 aa4.94□□□□□ -1.62
SCLT1-207ENST00000506233 OR5D14Q8NGL3 314 aa4.94□□□□□ -1.62
SCLT1-207ENST00000506233 OR1F12Q8NHA8 337 aa4.94□□□□□ -1.62
SCLT1-207ENST00000506233 GTF3AQ92664 365 aaKnown RBP4.94□□□□□ -1.62
SCLT1-207ENST00000506233 SLITRK2Q9H156 845 aa4.94□□□□□ -1.62
SCLT1-207ENST00000506233 MOB1AQ9H8S9 216 aa4.94□□□□□ -1.62
SCLT1-207ENST00000506233 BEX1Q9HBH7 125 aa4.94□□□□□ -1.62
SCLT1-207ENST00000506233 TMEM138Q9NPI0 162 aa4.94□□□□□ -1.62
SCLT1-207ENST00000506233 TEKT2Q9UIF3 430 aa4.94□□□□□ -1.62
SCLT1-207ENST00000506233 IKZF2Q9UKS7 526 aa4.94□□□□□ -1.62
SCLT1-207ENST00000506233 FAM166BA8MTA8 275 aa4.93□□□□□ -1.62
SCLT1-207ENST00000506233 M0QZ24 198 aa4.93□□□□□ -1.62
SCLT1-207ENST00000506233 SULT1C2O00338 296 aa4.93□□□□□ -1.62
SCLT1-207ENST00000506233 HIST1H1DP16402 221 aaKnown RBP4.93□□□□□ -1.62
SCLT1-207ENST00000506233 COL8A2P25067 703 aa4.93□□□□□ -1.62
SCLT1-207ENST00000506233 RAB11BQ15907 218 aa4.93□□□□□ -1.62
SCLT1-207ENST00000506233 HIKESHIQ53FT3 197 aa4.93□□□□□ -1.62
SCLT1-207ENST00000506233 ELP2Q6IA86 826 aa4.93□□□□□ -1.62
SCLT1-207ENST00000506233 TMEM53Q6P2H8 277 aa4.93□□□□□ -1.62
SCLT1-207ENST00000506233 RFPL4BQ6ZWI9 263 aa4.93□□□□□ -1.62
SCLT1-207ENST00000506233 TGIF2LYQ8IUE0 185 aa4.93□□□□□ -1.62
SCLT1-207ENST00000506233 ZNF433Q8N7K0 673 aaPredicted RBP4.93□□□□□ -1.62
SCLT1-207ENST00000506233 OR1K1Q8NGR3 316 aa4.93□□□□□ -1.62
SCLT1-207ENST00000506233 OR10K1Q8NGX5 313 aa4.93□□□□□ -1.62
SCLT1-207ENST00000506233 HIST1H2ACQ93077 130 aa4.93□□□□□ -1.62
SCLT1-207ENST00000506233 C7orf50Q9BRJ6 194 aaKnown RBP4.93□□□□□ -1.62
SCLT1-207ENST00000506233 NDRG3Q9UGV2 375 aa4.93□□□□□ -1.62
SCLT1-207ENST00000506233 TRAV24A0A0B4J272 114 aa4.93□□□□□ -1.62
SCLT1-207ENST00000506233 MCRIP1C9JLW8 97 aa4.93□□□□□ -1.62
SCLT1-207ENST00000506233 H0YL77 283 aa4.93□□□□□ -1.62
SCLT1-207ENST00000506233 J3QR06 171 aa4.93□□□□□ -1.62
SCLT1-207ENST00000506233 XKRYO14609 159 aa4.93□□□□□ -1.62
SCLT1-207ENST00000506233 KRT33AO76009 404 aa4.93□□□□□ -1.62
SCLT1-207ENST00000506233 SPDEFO95238 335 aa4.93□□□□□ -1.62
SCLT1-207ENST00000506233 TFF1P04155 84 aa4.93□□□□□ -1.62
SCLT1-207ENST00000506233 FCER2P06734 321 aa4.93□□□□□ -1.62
SCLT1-207ENST00000506233 KLK3P07288 261 aaPredicted RBP4.93□□□□□ -1.62
SCLT1-207ENST00000506233 LOXP28300 417 aaPredicted RBP4.93□□□□□ -1.62
SCLT1-207ENST00000506233 HRH1P35367 487 aa4.93□□□□□ -1.62
SCLT1-207ENST00000506233 SSBP1Q04837 148 aaKnown RBP4.93□□□□□ -1.62
SCLT1-207ENST00000506233 RAET1LQ5VY80 246 aa4.93□□□□□ -1.62
SCLT1-207ENST00000506233 VWA1Q6PCB0 445 aa4.93□□□□□ -1.62
SCLT1-207ENST00000506233 GLIPR1L1Q6UWM5 242 aa4.93□□□□□ -1.62
SCLT1-207ENST00000506233 BAIAP2L2Q6UXY1 529 aa4.93□□□□□ -1.62
SCLT1-207ENST00000506233 TCF23Q7RTU1 214 aa4.93□□□□□ -1.62
SCLT1-207ENST00000506233 OR2W3Q7Z3T1 314 aa4.93□□□□□ -1.62
SCLT1-207ENST00000506233 OR51T1Q8NGJ9 327 aa4.93□□□□□ -1.62
SCLT1-207ENST00000506233 DEDD2Q8WXF8 326 aa4.93□□□□□ -1.62
SCLT1-207ENST00000506233 STARD4Q96DR4 205 aa4.93□□□□□ -1.62
SCLT1-207ENST00000506233 MGAT4AQ9UM21 535 aa4.93□□□□□ -1.62
SCLT1-207ENST00000506233 STARD10Q9Y365 291 aa4.93□□□□□ -1.62
SCLT1-207ENST00000506233 CEP295Q9C0D2 2601 aa4.93□□□□□ -1.62
SCLT1-207ENST00000506233 CACNA1CQ13936 2221 aa4.93□□□□□ -1.62
SCLT1-207ENST00000506233 KMT2BQ9UMN6 2715 aaPredicted RBP4.93□□□□□ -1.62
SCLT1-207ENST00000506233 TRAV18A0A075B6X5 111 aa4.93□□□□□ -1.62
SCLT1-207ENST00000506233 A0A087X0K7 114 aa4.93□□□□□ -1.62
SCLT1-207ENST00000506233 A0A0A6YYH2 397 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms