RNA–Protein interactions for RNA: ENST00000506055.5

PPARGC1A-204, Transcript of PPARG coactivator 1 alpha, humanhuman

TSL 1 (best)

Gene PPARGC1A, Length 2,627 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1A-204ENST00000506055 SIGLEC12Q96PQ1 595 aa6.54□□□□□ -1.36
PPARGC1A-204ENST00000506055 RARRES2Q99969 163 aa6.54□□□□□ -1.36
PPARGC1A-204ENST00000506055 FGF23Q9GZV9 251 aaPredicted RBP6.54□□□□□ -1.36
PPARGC1A-204ENST00000506055 OR51B6Q9H340 312 aa6.54□□□□□ -1.36
PPARGC1A-204ENST00000506055 FAM86C1Q9NVL1 165 aa6.54□□□□□ -1.36
PPARGC1A-204ENST00000506055 MTCH1Q9NZJ7 389 aa6.54□□□□□ -1.36
PPARGC1A-204ENST00000506055 IGSF23A1L1A6 192 aa6.54□□□□□ -1.36
PPARGC1A-204ENST00000506055 TRAPPC2LH3BP13 241 aa6.54□□□□□ -1.36
PPARGC1A-204ENST00000506055 CST7O76096 145 aa6.54□□□□□ -1.36
PPARGC1A-204ENST00000506055 PPP1CCP36873 323 aaKnown RBP6.54□□□□□ -1.36
PPARGC1A-204ENST00000506055 HMGN3Q15651 99 aa6.54□□□□□ -1.36
PPARGC1A-204ENST00000506055 CEACAM21Q3KPI0 293 aa6.54□□□□□ -1.36
PPARGC1A-204ENST00000506055 TCEAL6Q6IPX3 200 aa6.54□□□□□ -1.36
PPARGC1A-204ENST00000506055 COLCA1Q6ZS62 124 aa6.54□□□□□ -1.36
PPARGC1A-204ENST00000506055 SELENOHQ8IZQ5 122 aaKnown RBP6.54□□□□□ -1.36
PPARGC1A-204ENST00000506055 C15orf54Q8N8G6 183 aa6.54□□□□□ -1.36
PPARGC1A-204ENST00000506055 TCEAL3Q969E4 200 aa6.54□□□□□ -1.36
PPARGC1A-204ENST00000506055 ZNF488Q96MN9 340 aa6.54□□□□□ -1.36
PPARGC1A-204ENST00000506055 ABHD14AQ9BUJ0 271 aa6.54□□□□□ -1.36
PPARGC1A-204ENST00000506055 SCRT1Q9BWW7 348 aa6.54□□□□□ -1.36
PPARGC1A-204ENST00000506055 ZNF552Q9H707 407 aaPredicted RBP6.54□□□□□ -1.36
PPARGC1A-204ENST00000506055 Q9N2K0 584 aa6.54□□□□□ -1.36
PPARGC1A-204ENST00000506055 CCL28Q9NRJ3 127 aa6.54□□□□□ -1.36
PPARGC1A-204ENST00000506055 BOKQ9UMX3 212 aaPredicted RBP6.54□□□□□ -1.36
PPARGC1A-204ENST00000506055 SLC22A20A6NK97 555 aa6.53□□□□□ -1.36
PPARGC1A-204ENST00000506055 CDRT15L2A8MXV6 281 aa6.53□□□□□ -1.36
PPARGC1A-204ENST00000506055 PROB1E7EW31 1015 aa6.53□□□□□ -1.36
PPARGC1A-204ENST00000506055 SYNGR1O43759 233 aa6.53□□□□□ -1.36
PPARGC1A-204ENST00000506055 CDS2O95674 445 aa6.53□□□□□ -1.36
PPARGC1A-204ENST00000506055 ARG1P05089 322 aa6.53□□□□□ -1.36
PPARGC1A-204ENST00000506055 CBR1P16152 277 aa6.53□□□□□ -1.36
PPARGC1A-204ENST00000506055 PTAFRP25105 342 aa6.53□□□□□ -1.36
PPARGC1A-204ENST00000506055 MAGEA5P43359 124 aa6.53□□□□□ -1.36
PPARGC1A-204ENST00000506055 LHX2P50458 406 aa6.53□□□□□ -1.36
PPARGC1A-204ENST00000506055 RAB5CP51148 216 aa6.53□□□□□ -1.36
PPARGC1A-204ENST00000506055 CEBPGP53567 150 aa6.53□□□□□ -1.36
PPARGC1A-204ENST00000506055 RAB5BP61020 215 aa6.53□□□□□ -1.36
PPARGC1A-204ENST00000506055 FGF12P61328 243 aa6.53□□□□□ -1.36
PPARGC1A-204ENST00000506055 RAB1AP62820 205 aa6.53□□□□□ -1.36
PPARGC1A-204ENST00000506055 VAMP2P63027 116 aa6.53□□□□□ -1.36
PPARGC1A-204ENST00000506055 SRPXP78539 464 aa6.53□□□□□ -1.36
PPARGC1A-204ENST00000506055 ZXDAP98168 799 aa6.53□□□□□ -1.36
PPARGC1A-204ENST00000506055 HABP2Q14520 560 aaPredicted RBP6.53□□□□□ -1.36
PPARGC1A-204ENST00000506055 HERPUD1Q15011 391 aa6.53□□□□□ -1.36
PPARGC1A-204ENST00000506055 ZDHHC23Q8IYP9 409 aa6.53□□□□□ -1.36
PPARGC1A-204ENST00000506055 FAM185AQ8N0U4 392 aa6.53□□□□□ -1.36
PPARGC1A-204ENST00000506055 COMMD1Q8N668 190 aa6.53□□□□□ -1.36
PPARGC1A-204ENST00000506055 SFT2D1Q8WV19 159 aa6.53□□□□□ -1.36
PPARGC1A-204ENST00000506055 HIST1H2BAQ96A08 127 aa6.53□□□□□ -1.36
PPARGC1A-204ENST00000506055 CDX2Q99626 313 aaPredicted RBP6.53□□□□□ -1.36
PPARGC1A-204ENST00000506055 PBDC1Q9BVG4 233 aa6.53□□□□□ -1.36
PPARGC1A-204ENST00000506055 SLC35B3Q9H1N7 401 aa6.53□□□□□ -1.36
PPARGC1A-204ENST00000506055 KCNJ16Q9NPI9 418 aa6.53□□□□□ -1.36
PPARGC1A-204ENST00000506055 COA4Q9NYJ1 87 aa6.53□□□□□ -1.36
PPARGC1A-204ENST00000506055 PLA2G3Q9NZ20 509 aa6.53□□□□□ -1.36
PPARGC1A-204ENST00000506055 STRAPQ9Y3F4 350 aaKnown RBP6.53□□□□□ -1.36
PPARGC1A-204ENST00000506055 A0A1W2PPH5 198 aa6.53□□□□□ -1.36
PPARGC1A-204ENST00000506055 A6NLC8 198 aa6.53□□□□□ -1.36
PPARGC1A-204ENST00000506055 ZNF724A8MTY0 619 aa6.53□□□□□ -1.36
PPARGC1A-204ENST00000506055 C1orf196B1AJZ1 125 aa6.53□□□□□ -1.36
PPARGC1A-204ENST00000506055 B4E171 279 aa6.53□□□□□ -1.36
PPARGC1A-204ENST00000506055 NEURL1O76050 574 aa6.53□□□□□ -1.36
PPARGC1A-204ENST00000506055 NAPSAO96009 420 aa6.53□□□□□ -1.36
PPARGC1A-204ENST00000506055 TDGF1P13385 188 aa6.53□□□□□ -1.36
PPARGC1A-204ENST00000506055 ATP6V0CP27449 155 aa6.53□□□□□ -1.36
PPARGC1A-204ENST00000506055 PMELP40967 661 aa6.53□□□□□ -1.36
PPARGC1A-204ENST00000506055 TSPAN7P41732 249 aa6.53□□□□□ -1.36
PPARGC1A-204ENST00000506055 UCP2P55851 309 aa6.53□□□□□ -1.36
PPARGC1A-204ENST00000506055 CCL20P78556 96 aa6.53□□□□□ -1.36
PPARGC1A-204ENST00000506055 C20orf204Q6ZNR8 217 aa6.53□□□□□ -1.36
PPARGC1A-204ENST00000506055 LINC00696Q6ZRV3 163 aa6.53□□□□□ -1.36
PPARGC1A-204ENST00000506055 MKXQ8IYA7 352 aa6.53□□□□□ -1.36
PPARGC1A-204ENST00000506055 FAM24BQ8N5W8 94 aa6.53□□□□□ -1.36
PPARGC1A-204ENST00000506055 OR2M7Q8NG81 312 aa6.53□□□□□ -1.36
PPARGC1A-204ENST00000506055 OR5C1Q8NGR4 320 aa6.53□□□□□ -1.36
PPARGC1A-204ENST00000506055 LILRB1Q8NHL6 650 aaPredicted RBP6.53□□□□□ -1.36
PPARGC1A-204ENST00000506055 TMEM171Q8WVE6 324 aa6.53□□□□□ -1.36
PPARGC1A-204ENST00000506055 RDH5Q92781 318 aa6.53□□□□□ -1.36
PPARGC1A-204ENST00000506055 TMEM45BQ96B21 275 aa6.53□□□□□ -1.36
PPARGC1A-204ENST00000506055 TMEM56Q96MV1 263 aa6.53□□□□□ -1.36
PPARGC1A-204ENST00000506055 HIST1H2AAQ96QV6 131 aa6.53□□□□□ -1.36
PPARGC1A-204ENST00000506055 PLEKHF2Q9H8W4 249 aa6.53□□□□□ -1.36
PPARGC1A-204ENST00000506055 MRPS18CQ9Y3D5 142 aaKnown RBP6.53□□□□□ -1.36
PPARGC1A-204ENST00000506055 PUS1Q9Y606 427 aaKnown RBP eCLIP6.53□□□□□ -1.36
PPARGC1A-204ENST00000506055 R4GN57 208 aa6.53□□□□□ -1.36
PPARGC1A-204ENST00000506055 TMEM56-RWDD3S4R434 201 aa6.53□□□□□ -1.36
PPARGC1A-204ENST00000506055 TMEM265A0A087WTH1 108 aa6.52□□□□□ -1.37
PPARGC1A-204ENST00000506055 IGKV1-6A0A0C4DH72 117 aa6.52□□□□□ -1.37
PPARGC1A-204ENST00000506055 hCG_1809904A0A1W2PP81 198 aa6.52□□□□□ -1.37
PPARGC1A-204ENST00000506055 A0A1W2PR64 198 aa6.52□□□□□ -1.37
PPARGC1A-204ENST00000506055 A0A1W2PRV1 198 aa6.52□□□□□ -1.37
PPARGC1A-204ENST00000506055 CHST1O43916 411 aa6.52□□□□□ -1.37
PPARGC1A-204ENST00000506055 LILRA1O75019 489 aa6.52□□□□□ -1.37
PPARGC1A-204ENST00000506055 EIF3GO75821 320 aaKnown RBP eCLIP6.52□□□□□ -1.37
PPARGC1A-204ENST00000506055 SYNGR4O95473 234 aa6.52□□□□□ -1.37
PPARGC1A-204ENST00000506055 S100A6P06703 90 aa6.52□□□□□ -1.37
PPARGC1A-204ENST00000506055 JMJD7P0C870 316 aa6.52□□□□□ -1.37
PPARGC1A-204ENST00000506055 CLDN18P56856 261 aa6.52□□□□□ -1.37
PPARGC1A-204ENST00000506055 ZNF266Q14584 549 aa6.52□□□□□ -1.37
PPARGC1A-204ENST00000506055 IGFBP7Q16270 282 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms