RNA–Protein interactions for RNA: ENST00000504875.5

CSF1R-203, Transcript of colony stimulating factor 1 receptor, humanhuman

TSL 1 (best)

Gene CSF1R, Length 3,697 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1R-203ENST00000504875 PTGER4P35408 488 aa8.42□□□□□ -1.06
CSF1R-203ENST00000504875 UBE2NP61088 152 aaKnown RBP8.42□□□□□ -1.06
CSF1R-203ENST00000504875 FBXW12Q6X9E4 464 aa8.42□□□□□ -1.06
CSF1R-203ENST00000504875 ZDHHC23Q8IYP9 409 aa8.42□□□□□ -1.06
CSF1R-203ENST00000504875 CPEB3Q8NE35 698 aaKnown RBP8.42□□□□□ -1.06
CSF1R-203ENST00000504875 PSMF1Q92530 271 aa8.42□□□□□ -1.06
CSF1R-203ENST00000504875 EXTL1Q92935 676 aa8.42□□□□□ -1.06
CSF1R-203ENST00000504875 RTBDNQ9BSG5 229 aaPredicted RBP8.42□□□□□ -1.06
CSF1R-203ENST00000504875 GPR87Q9BY21 358 aa8.42□□□□□ -1.06
CSF1R-203ENST00000504875 OPA3Q9H6K4 179 aa8.42□□□□□ -1.06
CSF1R-203ENST00000504875 GAR1Q9NY12 217 aaKnown RBP8.42□□□□□ -1.06
CSF1R-203ENST00000504875 PDCD6O75340 191 aa8.42□□□□□ -1.06
CSF1R-203ENST00000504875 MED6O75586 246 aa8.42□□□□□ -1.06
CSF1R-203ENST00000504875 NEURL1O76050 574 aa8.42□□□□□ -1.06
CSF1R-203ENST00000504875 FCGR3AP08637 254 aa8.42□□□□□ -1.06
CSF1R-203ENST00000504875 FUT3P21217 361 aa8.42□□□□□ -1.06
CSF1R-203ENST00000504875 HOXC12P31275 282 aa8.42□□□□□ -1.06
CSF1R-203ENST00000504875 ZNF616Q08AN1 781 aa8.42□□□□□ -1.06
CSF1R-203ENST00000504875 SURF2Q15527 256 aaPredicted RBP8.42□□□□□ -1.06
CSF1R-203ENST00000504875 ZNF674Q2M3X9 581 aa8.42□□□□□ -1.06
CSF1R-203ENST00000504875 HIKESHIQ53FT3 197 aa8.42□□□□□ -1.06
CSF1R-203ENST00000504875 GGNBP1Q5YKI7 109 aa8.42□□□□□ -1.06
CSF1R-203ENST00000504875 CALHM1Q8IU99 346 aa8.42□□□□□ -1.06
CSF1R-203ENST00000504875 NMES1Q9C002 83 aa8.42□□□□□ -1.06
CSF1R-203ENST00000504875 ZNF703Q9H7S9 590 aaPredicted RBP8.42□□□□□ -1.06
CSF1R-203ENST00000504875 SH2D2AQ9NP31 389 aa8.42□□□□□ -1.06
CSF1R-203ENST00000504875 MSGN1A6NI15 193 aa8.42□□□□□ -1.06
CSF1R-203ENST00000504875 FIGNL2A6NMB9 653 aa8.42□□□□□ -1.06
CSF1R-203ENST00000504875 NGFP01138 241 aa8.42□□□□□ -1.06
CSF1R-203ENST00000504875 TK1P04183 234 aa8.42□□□□□ -1.06
CSF1R-203ENST00000504875 CD37P11049 281 aa8.42□□□□□ -1.06
CSF1R-203ENST00000504875 IDH3GP51553 393 aaPredicted RBP8.42□□□□□ -1.06
CSF1R-203ENST00000504875 CAV2P51636 162 aa8.42□□□□□ -1.06
CSF1R-203ENST00000504875 SPCS3P61009 180 aa8.42□□□□□ -1.06
CSF1R-203ENST00000504875 OR2T2Q6IF00 324 aa8.42□□□□□ -1.06
CSF1R-203ENST00000504875 SLC25A24Q6NUK1 477 aa8.42□□□□□ -1.06
CSF1R-203ENST00000504875 FAM89BQ8N5H3 189 aa8.42□□□□□ -1.06
CSF1R-203ENST00000504875 CCDC71LQ8N9Z2 235 aa8.42□□□□□ -1.06
CSF1R-203ENST00000504875 UBALD1Q8TB05 177 aa8.42□□□□□ -1.06
CSF1R-203ENST00000504875 RNF141Q8WVD5 230 aa8.42□□□□□ -1.06
CSF1R-203ENST00000504875 MISP3Q96FF7 219 aa8.42□□□□□ -1.06
CSF1R-203ENST00000504875 DDA1Q9BW61 102 aa8.42□□□□□ -1.06
CSF1R-203ENST00000504875 STARD10Q9Y365 291 aa8.42□□□□□ -1.06
CSF1R-203ENST00000504875 ADAMTS20P59510 1910 aa8.41□□□□□ -1.06
CSF1R-203ENST00000504875 DIDO1Q9BTC0 2240 aaKnown RBP8.41□□□□□ -1.06
CSF1R-203ENST00000504875 DBX1A6NMT0 343 aa8.41□□□□□ -1.06
CSF1R-203ENST00000504875 SLC34A2O95436 690 aa8.41□□□□□ -1.06
CSF1R-203ENST00000504875 BCL3P20749 454 aa8.41□□□□□ -1.06
CSF1R-203ENST00000504875 RPL12P30050 165 aaKnown RBP8.41□□□□□ -1.06
CSF1R-203ENST00000504875 OTX1P32242 354 aaPredicted RBP8.41□□□□□ -1.06
CSF1R-203ENST00000504875 PMP22Q01453 160 aa8.41□□□□□ -1.06
CSF1R-203ENST00000504875 ZNF345Q14585 488 aa8.41□□□□□ -1.06
CSF1R-203ENST00000504875 RIPPLY2Q5TAB7 128 aa8.41□□□□□ -1.06
CSF1R-203ENST00000504875 AADACL3Q5VUY0 350 aa8.41□□□□□ -1.06
CSF1R-203ENST00000504875 ABLIM2Q6H8Q1 611 aa8.41□□□□□ -1.06
CSF1R-203ENST00000504875 PRSS54Q6PEW0 395 aa8.41□□□□□ -1.06
CSF1R-203ENST00000504875 ZNF695Q8IW36 515 aa8.41□□□□□ -1.06
CSF1R-203ENST00000504875 OR11L1Q8NGX0 322 aa8.41□□□□□ -1.06
CSF1R-203ENST00000504875 ZNF488Q96MN9 340 aa8.41□□□□□ -1.06
CSF1R-203ENST00000504875 CDH20Q9HBT6 801 aa8.41□□□□□ -1.06
CSF1R-203ENST00000504875 METTL1Q9UBP6 276 aaKnown RBP8.41□□□□□ -1.06
CSF1R-203ENST00000504875 OSGIN2Q9Y236 505 aa8.41□□□□□ -1.06
CSF1R-203ENST00000504875 ZNF705GA8MUZ8 300 aaPredicted RBP8.41□□□□□ -1.06
CSF1R-203ENST00000504875 C21orf140B9A014 251 aa8.41□□□□□ -1.06
CSF1R-203ENST00000504875 RNASEK-C17orf49H0YIS7 233 aa8.41□□□□□ -1.06
CSF1R-203ENST00000504875 HSD17B6O14756 317 aa8.41□□□□□ -1.06
CSF1R-203ENST00000504875 TNFSF12O43508 249 aa8.41□□□□□ -1.06
CSF1R-203ENST00000504875 MT-ND4LP03901 98 aa8.41□□□□□ -1.06
CSF1R-203ENST00000504875 OR8U8P0C7N1 319 aa8.41□□□□□ -1.06
CSF1R-203ENST00000504875 EPHA1P21709 976 aa8.41□□□□□ -1.06
CSF1R-203ENST00000504875 OMGP23515 440 aa8.41□□□□□ -1.06
CSF1R-203ENST00000504875 VAMP2P63027 116 aa8.41□□□□□ -1.06
CSF1R-203ENST00000504875 RPP30P78346 268 aaKnown RBP8.41□□□□□ -1.06
CSF1R-203ENST00000504875 GAMTQ14353 236 aa8.41□□□□□ -1.06
CSF1R-203ENST00000504875 GNMTQ14749 295 aa8.41□□□□□ -1.06
CSF1R-203ENST00000504875 APOBEC3DQ96AK3 386 aaPredicted RBP8.41□□□□□ -1.06
CSF1R-203ENST00000504875 GPHA2Q96T91 129 aa8.41□□□□□ -1.06
CSF1R-203ENST00000504875 EIF5A2Q9GZV4 153 aaKnown RBP8.41□□□□□ -1.06
CSF1R-203ENST00000504875 TAF9BQ9HBM6 251 aa8.41□□□□□ -1.06
CSF1R-203ENST00000504875 PRSS50Q9UI38 385 aa8.41□□□□□ -1.06
CSF1R-203ENST00000504875 MMP24Q9Y5R2 645 aa8.41□□□□□ -1.06
CSF1R-203ENST00000504875 URGCP-MRPS24S4R325 110 aa8.41□□□□□ -1.06
CSF1R-203ENST00000504875 IGKV1-12A0A0C4DH73 117 aa8.41□□□□□ -1.06
CSF1R-203ENST00000504875 hCG_38984A0A1B0GV85 526 aa8.41□□□□□ -1.06
CSF1R-203ENST00000504875 IGKV1D-12P01611 117 aa8.41□□□□□ -1.06
CSF1R-203ENST00000504875 SP1P08047 785 aa8.41□□□□□ -1.06
CSF1R-203ENST00000504875 MUC1P15941 1255 aaPredicted RBP8.41□□□□□ -1.06
CSF1R-203ENST00000504875 S100GP29377 79 aa8.41□□□□□ -1.06
CSF1R-203ENST00000504875 DDTP30046 118 aa8.41□□□□□ -1.06
CSF1R-203ENST00000504875 ECI1P42126 302 aa8.41□□□□□ -1.06
CSF1R-203ENST00000504875 FOXO1Q12778 655 aa8.41□□□□□ -1.06
CSF1R-203ENST00000504875 PYY3Q5JQD4 70 aa8.41□□□□□ -1.06
CSF1R-203ENST00000504875 RPL7L1Q6DKI1 246 aaKnown RBP8.41□□□□□ -1.06
CSF1R-203ENST00000504875 NUFIP2Q7Z417 695 aaKnown RBP8.41□□□□□ -1.06
CSF1R-203ENST00000504875 NANOS1Q8WY41 292 aaKnown RBP8.41□□□□□ -1.06
CSF1R-203ENST00000504875 RRNAD1Q96FB5 475 aaKnown RBP8.41□□□□□ -1.06
CSF1R-203ENST00000504875 PIK3IP1Q96FE7 263 aa8.41□□□□□ -1.06
CSF1R-203ENST00000504875 TM2D1Q9BX74 207 aa8.41□□□□□ -1.06
CSF1R-203ENST00000504875 SEC11CQ9BY50 192 aa8.41□□□□□ -1.06
CSF1R-203ENST00000504875 ZNF391Q9UJN7 358 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms