RNA–Protein interactions for RNA: ENST00000504841.6

NPIPB3-203, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

APPRIS P1 TSL 1 (best)

Gene NPIPB3, Length 1,254 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-203ENST00000504841 CCL1P22362 96 aa5.38□□□□□ -1.55
NPIPB3-203ENST00000504841 CDX1P47902 265 aaPredicted RBP5.38□□□□□ -1.55
NPIPB3-203ENST00000504841 RAB7AP51149 207 aa5.38□□□□□ -1.55
NPIPB3-203ENST00000504841 ATP1B3P54709 279 aa5.38□□□□□ -1.55
NPIPB3-203ENST00000504841 MTCP1P56278 107 aa5.38□□□□□ -1.55
NPIPB3-203ENST00000504841 ACTR3P61158 418 aa5.38□□□□□ -1.55
NPIPB3-203ENST00000504841 CDK5Q00535 292 aa5.38□□□□□ -1.55
NPIPB3-203ENST00000504841 FOXE3Q13461 319 aa5.38□□□□□ -1.55
NPIPB3-203ENST00000504841 TMEM179BQ7Z7N9 219 aa5.38□□□□□ -1.55
NPIPB3-203ENST00000504841 HS3ST5Q8IZT8 346 aa5.38□□□□□ -1.55
NPIPB3-203ENST00000504841 OR8H3Q8N146 312 aa5.38□□□□□ -1.55
NPIPB3-203ENST00000504841 YIPF7Q8N8F6 280 aa5.38□□□□□ -1.55
NPIPB3-203ENST00000504841 OR10X1Q8NGY0 326 aa5.38□□□□□ -1.55
NPIPB3-203ENST00000504841 RFESDQ8TAC1 157 aa5.38□□□□□ -1.55
NPIPB3-203ENST00000504841 CORO2AQ92828 525 aa5.38□□□□□ -1.55
NPIPB3-203ENST00000504841 HSPB9Q9BQS6 159 aa5.38□□□□□ -1.55
NPIPB3-203ENST00000504841 GON7Q9BXV9 100 aa5.38□□□□□ -1.55
NPIPB3-203ENST00000504841 HMG20AQ9NP66 347 aa5.38□□□□□ -1.55
NPIPB3-203ENST00000504841 CALYQ9NYX4 217 aa5.38□□□□□ -1.55
NPIPB3-203ENST00000504841 OR6C3Q9NZP0 311 aa5.38□□□□□ -1.55
NPIPB3-203ENST00000504841 PSG11Q9UQ72 335 aa5.38□□□□□ -1.55
NPIPB3-203ENST00000504841 SIRT4Q9Y6E7 314 aaPredicted RBP5.38□□□□□ -1.55
NPIPB3-203ENST00000504841 EPPK1P58107 5090 aaKnown RBP5.38□□□□□ -1.55
NPIPB3-203ENST00000504841 MEIKINA0A087WXM9 373 aa5.37□□□□□ -1.55
NPIPB3-203ENST00000504841 IGKV1-12A0A0C4DH73 117 aa5.37□□□□□ -1.55
NPIPB3-203ENST00000504841 KBTBD11-OT1A0A1B0GTJ5 212 aa5.37□□□□□ -1.55
NPIPB3-203ENST00000504841 LOC107986453A0A1B0GWG9 222 aa5.37□□□□□ -1.55
NPIPB3-203ENST00000504841 SLC33A1O00400 549 aaPredicted RBP5.37□□□□□ -1.55
NPIPB3-203ENST00000504841 CCRL2O00421 344 aa5.37□□□□□ -1.55
NPIPB3-203ENST00000504841 PRKYO43930 277 aa5.37□□□□□ -1.55
NPIPB3-203ENST00000504841 APOL3O95236 402 aa5.37□□□□□ -1.55
NPIPB3-203ENST00000504841 IGKV1D-12P01611 117 aa5.37□□□□□ -1.55
NPIPB3-203ENST00000504841 ELANEP08246 267 aa5.37□□□□□ -1.55
NPIPB3-203ENST00000504841 OR8U8P0C7N1 319 aa5.37□□□□□ -1.55
NPIPB3-203ENST00000504841 GP9P14770 177 aa5.37□□□□□ -1.55
NPIPB3-203ENST00000504841 ATF1P18846 271 aa5.37□□□□□ -1.55
NPIPB3-203ENST00000504841 PRKACGP22612 351 aa5.37□□□□□ -1.55
NPIPB3-203ENST00000504841 RBP2P50120 134 aa5.37□□□□□ -1.55
NPIPB3-203ENST00000504841 INSL3P51460 131 aa5.37□□□□□ -1.55
NPIPB3-203ENST00000504841 FHL3Q13643 280 aa5.37□□□□□ -1.55
NPIPB3-203ENST00000504841 ASPHD1Q5U4P2 390 aa5.37□□□□□ -1.55
NPIPB3-203ENST00000504841 FAM53AQ6NSI3 398 aaPredicted RBP5.37□□□□□ -1.55
NPIPB3-203ENST00000504841 SSX6Q7RTT6 188 aa5.37□□□□□ -1.55
NPIPB3-203ENST00000504841 HAPLN4Q86UW8 402 aa5.37□□□□□ -1.55
NPIPB3-203ENST00000504841 DHFR2Q86XF0 187 aa5.37□□□□□ -1.55
NPIPB3-203ENST00000504841 CATSPERDQ86XM0 798 aa5.37□□□□□ -1.55
NPIPB3-203ENST00000504841 TGIF2LXQ8IUE1 241 aa5.37□□□□□ -1.55
NPIPB3-203ENST00000504841 RDH10Q8IZV5 341 aa5.37□□□□□ -1.55
NPIPB3-203ENST00000504841 Q8N9W7 124 aa5.37□□□□□ -1.55
NPIPB3-203ENST00000504841 OR13A1Q8NGR1 328 aa5.37□□□□□ -1.55
NPIPB3-203ENST00000504841 OR1N2Q8NGR9 330 aa5.37□□□□□ -1.55
NPIPB3-203ENST00000504841 HAVCR2Q8TDQ0 301 aa5.37□□□□□ -1.55
NPIPB3-203ENST00000504841 MRGPRDQ8TDS7 321 aa5.37□□□□□ -1.55
NPIPB3-203ENST00000504841 DCUN1D4Q92564 292 aa5.37□□□□□ -1.55
NPIPB3-203ENST00000504841 RBMXL1Q96E39 390 aaKnown RBP5.37□□□□□ -1.55
NPIPB3-203ENST00000504841 ADAT3Q96EY9 351 aaPredicted RBP5.37□□□□□ -1.55
NPIPB3-203ENST00000504841 EAF1Q96JC9 268 aaPredicted RBP5.37□□□□□ -1.55
NPIPB3-203ENST00000504841 LRGUKQ96M69 825 aa5.37□□□□□ -1.55
NPIPB3-203ENST00000504841 SPACA5Q96QH8 159 aa5.37□□□□□ -1.55
NPIPB3-203ENST00000504841 RASL11BQ9BPW5 248 aa5.37□□□□□ -1.55
NPIPB3-203ENST00000504841 ABCG5Q9H222 651 aa5.37□□□□□ -1.55
NPIPB3-203ENST00000504841 GNB4Q9HAV0 340 aa5.37□□□□□ -1.55
NPIPB3-203ENST00000504841 SEBOXQ9HB31 216 aaPredicted RBP5.37□□□□□ -1.55
NPIPB3-203ENST00000504841 ADGRL4Q9HBW9 690 aa5.37□□□□□ -1.55
NPIPB3-203ENST00000504841 SLC25A19Q9HC21 320 aa5.37□□□□□ -1.55
NPIPB3-203ENST00000504841 LIN7CQ9NUP9 197 aaKnown RBP5.37□□□□□ -1.55
NPIPB3-203ENST00000504841 ARL8BQ9NVJ2 186 aa5.37□□□□□ -1.55
NPIPB3-203ENST00000504841 IDI2-AS1Q9NZ38 188 aa5.37□□□□□ -1.55
NPIPB3-203ENST00000504841 TAGLN3Q9UI15 199 aa5.37□□□□□ -1.55
NPIPB3-203ENST00000504841 KIF25Q9UIL4 384 aa5.37□□□□□ -1.55
NPIPB3-203ENST00000504841 TRAV39A0A0B4J263 110 aa5.36□□□□□ -1.55
NPIPB3-203ENST00000504841 IGHV1-3A0A0C4DH29 117 aa5.36□□□□□ -1.55
NPIPB3-203ENST00000504841 IGKV1-9A0A0C4DH69 117 aa5.36□□□□□ -1.55
NPIPB3-203ENST00000504841 H0YJX3 145 aa5.36□□□□□ -1.55
NPIPB3-203ENST00000504841 OVOL1O14753 267 aa5.36□□□□□ -1.55
NPIPB3-203ENST00000504841 DEGS1O15121 323 aa5.36□□□□□ -1.55
NPIPB3-203ENST00000504841 MPZL2O60487 215 aa5.36□□□□□ -1.55
NPIPB3-203ENST00000504841 SNX3O60493 162 aa5.36□□□□□ -1.55
NPIPB3-203ENST00000504841 IL1AP01583 271 aa5.36□□□□□ -1.55
NPIPB3-203ENST00000504841 IGHG4P01861 327 aa5.36□□□□□ -1.55
NPIPB3-203ENST00000504841 CSN2P05814 226 aa5.36□□□□□ -1.55
NPIPB3-203ENST00000504841 SLC2A2P11168 524 aaPredicted RBP5.36□□□□□ -1.55
NPIPB3-203ENST00000504841 ZNF20P17024 532 aa5.36□□□□□ -1.55
NPIPB3-203ENST00000504841 PRKACBP22694 351 aa5.36□□□□□ -1.55
NPIPB3-203ENST00000504841 MYF6P23409 242 aa5.36□□□□□ -1.55
NPIPB3-203ENST00000504841 SSTR5P35346 364 aa5.36□□□□□ -1.55
NPIPB3-203ENST00000504841 SLURP1P55000 103 aa5.36□□□□□ -1.55
NPIPB3-203ENST00000504841 GNB1P62873 340 aa5.36□□□□□ -1.55
NPIPB3-203ENST00000504841 ZNF616Q08AN1 781 aa5.36□□□□□ -1.55
NPIPB3-203ENST00000504841 PDZK1IP1Q13113 114 aa5.36□□□□□ -1.55
NPIPB3-203ENST00000504841 PAN3Q58A45 887 aaKnown RBP5.36□□□□□ -1.55
NPIPB3-203ENST00000504841 TMEM65Q6PI78 240 aa5.36□□□□□ -1.55
NPIPB3-203ENST00000504841 Q6ZSR3 168 aa5.36□□□□□ -1.55
NPIPB3-203ENST00000504841 LHFPL2Q6ZUX7 228 aa5.36□□□□□ -1.55
NPIPB3-203ENST00000504841 ZNF429Q86V71 674 aa5.36□□□□□ -1.55
NPIPB3-203ENST00000504841 TCEANCQ8N8B7 351 aa5.36□□□□□ -1.55
NPIPB3-203ENST00000504841 DNAAF1Q8NEP3 725 aa5.36□□□□□ -1.55
NPIPB3-203ENST00000504841 OR10H4Q8NGA5 316 aa5.36□□□□□ -1.55
NPIPB3-203ENST00000504841 OR13C9Q8NGT0 318 aa5.36□□□□□ -1.55
NPIPB3-203ENST00000504841 OR2T10Q8NGZ9 312 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms