RNA–Protein interactions for RNA: ENST00000504761.6

TCOF1-207, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 4,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-207ENST00000504761 IGLV3-32A0A0A0MS00 114 aa12.17□□□□□ -0.46
TCOF1-207ENST00000504761 ZFP92A6NM28 416 aa12.17□□□□□ -0.46
TCOF1-207ENST00000504761 TRDCB7Z8K6 153 aa12.17□□□□□ -0.46
TCOF1-207ENST00000504761 TPPPO94811 219 aa12.17□□□□□ -0.46
TCOF1-207ENST00000504761 FAM27E3Q08E93 113 aa12.17□□□□□ -0.46
TCOF1-207ENST00000504761 THNSL2Q86YJ6 484 aa12.17□□□□□ -0.46
TCOF1-207ENST00000504761 SPICQ8N5J4 248 aa12.17□□□□□ -0.46
TCOF1-207ENST00000504761 PARD6AQ9NPB6 346 aa12.17□□□□□ -0.46
TCOF1-207ENST00000504761 SLC2A9Q9NRM0 540 aa12.17□□□□□ -0.46
TCOF1-207ENST00000504761 PSENENQ9NZ42 101 aa12.17□□□□□ -0.46
TCOF1-207ENST00000504761 ZNF319Q9P2F9 582 aa12.17□□□□□ -0.46
TCOF1-207ENST00000504761 MED19A0JLT2 244 aaPredicted RBP12.17□□□□□ -0.46
TCOF1-207ENST00000504761 OPN1MWP04001 364 aa12.17□□□□□ -0.46
TCOF1-207ENST00000504761 PDGFAP04085 211 aa12.17□□□□□ -0.46
TCOF1-207ENST00000504761 OPN1MW2P0DN77 364 aa12.17□□□□□ -0.46
TCOF1-207ENST00000504761 OPN1MW3P0DN78 364 aa12.17□□□□□ -0.46
TCOF1-207ENST00000504761 DEFA4P12838 97 aa12.17□□□□□ -0.46
TCOF1-207ENST00000504761 LPAR6P43657 344 aa12.17□□□□□ -0.46
TCOF1-207ENST00000504761 LCN15Q6UWW0 184 aa12.17□□□□□ -0.46
TCOF1-207ENST00000504761 MOB1BQ7L9L4 216 aa12.17□□□□□ -0.46
TCOF1-207ENST00000504761 KLF14Q8TD94 323 aaPredicted RBP12.17□□□□□ -0.46
TCOF1-207ENST00000504761 MED30Q96HR3 178 aa12.17□□□□□ -0.46
TCOF1-207ENST00000504761 SHARPINQ9H0F6 387 aa12.17□□□□□ -0.46
TCOF1-207ENST00000504761 PURGQ9UJV8 347 aaKnown RBP12.17□□□□□ -0.46
TCOF1-207ENST00000504761 CLEC18AA5D8T8 446 aa12.17□□□□□ -0.46
TCOF1-207ENST00000504761 DFFBO76075 338 aa12.17□□□□□ -0.46
TCOF1-207ENST00000504761 VSIG10L2P0DP72 767 aa12.17□□□□□ -0.46
TCOF1-207ENST00000504761 RRASP10301 218 aa12.17□□□□□ -0.46
TCOF1-207ENST00000504761 PMELP40967 661 aa12.17□□□□□ -0.46
TCOF1-207ENST00000504761 RPL19P84098 196 aaKnown RBP12.17□□□□□ -0.46
TCOF1-207ENST00000504761 ESCO2Q56NI9 601 aa12.17□□□□□ -0.46
TCOF1-207ENST00000504761 C9orf152Q5JTZ5 239 aa12.17□□□□□ -0.46
TCOF1-207ENST00000504761 TMEM123Q8N131 208 aa12.17□□□□□ -0.46
TCOF1-207ENST00000504761 CLEC18CQ8NCF0 446 aa12.17□□□□□ -0.46
TCOF1-207ENST00000504761 PTX4Q96A99 478 aa12.17□□□□□ -0.46
TCOF1-207ENST00000504761 ZNF524Q96C55 264 aa12.17□□□□□ -0.46
TCOF1-207ENST00000504761 PIK3IP1Q96FE7 263 aa12.17□□□□□ -0.46
TCOF1-207ENST00000504761 LTBP2Q14767 1821 aa12.17□□□□□ -0.46
TCOF1-207ENST00000504761 GPR37O15354 613 aa12.17□□□□□ -0.46
TCOF1-207ENST00000504761 PRF1P14222 555 aa12.17□□□□□ -0.46
TCOF1-207ENST00000504761 ZNF14P17017 642 aaPredicted RBP12.17□□□□□ -0.46
TCOF1-207ENST00000504761 COX7A1P24310 79 aa12.17□□□□□ -0.46
TCOF1-207ENST00000504761 ALDH3B1P43353 468 aa12.17□□□□□ -0.46
TCOF1-207ENST00000504761 DHODHQ02127 395 aa12.17□□□□□ -0.46
TCOF1-207ENST00000504761 MPV17LQ2QL34 196 aa12.17□□□□□ -0.46
TCOF1-207ENST00000504761 TBC1D26Q86UD7 250 aa12.17□□□□□ -0.46
TCOF1-207ENST00000504761 HOGA1Q86XE5 327 aa12.17□□□□□ -0.46
TCOF1-207ENST00000504761 CHAC2Q8WUX2 184 aa12.17□□□□□ -0.46
TCOF1-207ENST00000504761 RBPMSQ93062 196 aaKnown RBP12.17□□□□□ -0.46
TCOF1-207ENST00000504761 COMMD5Q9GZQ3 224 aa12.17□□□□□ -0.46
TCOF1-207ENST00000504761 DLL1O00548 723 aa12.16□□□□□ -0.46
TCOF1-207ENST00000504761 TEX261Q6UWH6 196 aa12.16□□□□□ -0.46
TCOF1-207ENST00000504761 LYPD8Q6UX82 237 aa12.16□□□□□ -0.46
TCOF1-207ENST00000504761 OR5M8Q8NGP6 311 aa12.16□□□□□ -0.46
TCOF1-207ENST00000504761 OR2V2Q96R30 315 aa12.16□□□□□ -0.46
TCOF1-207ENST00000504761 CACNG5Q9UF02 275 aa12.16□□□□□ -0.46
TCOF1-207ENST00000504761 U3KQ87 197 aa12.16□□□□□ -0.46
TCOF1-207ENST00000504761 ZGRF1Q86YA3 2104 aa12.16□□□□□ -0.46
TCOF1-207ENST00000504761 SHANK1Q9Y566 2161 aa12.16□□□□□ -0.46
TCOF1-207ENST00000504761 J3QRE1 110 aa12.16□□□□□ -0.46
TCOF1-207ENST00000504761 FCGR3AP08637 254 aa12.16□□□□□ -0.46
TCOF1-207ENST00000504761 CTSSP25774 331 aa12.16□□□□□ -0.46
TCOF1-207ENST00000504761 GNB2P62879 340 aa12.16□□□□□ -0.46
TCOF1-207ENST00000504761 RTL8BQ17RB0 113 aa12.16□□□□□ -0.46
TCOF1-207ENST00000504761 Q6ZRG5 221 aa12.16□□□□□ -0.46
TCOF1-207ENST00000504761 WDYHV1Q96HA8 205 aa12.16□□□□□ -0.46
TCOF1-207ENST00000504761 PLEKHA2Q9HB19 425 aa12.16□□□□□ -0.46
TCOF1-207ENST00000504761 RAB18Q9NP72 206 aa12.16□□□□□ -0.46
TCOF1-207ENST00000504761 NUP210Q8TEM1 1887 aaPredicted RBP12.16□□□□□ -0.46
TCOF1-207ENST00000504761 DOPEY2Q9Y3R5 2298 aa12.16□□□□□ -0.46
TCOF1-207ENST00000504761 A0A1W2PPE3 182 aa12.16□□□□□ -0.46
TCOF1-207ENST00000504761 SULT1A3P0DMM9 295 aa12.16□□□□□ -0.46
TCOF1-207ENST00000504761 SULT1A4P0DMN0 295 aa12.16□□□□□ -0.46
TCOF1-207ENST00000504761 POLR2GP62487 172 aaKnown RBP eCLIP12.16□□□□□ -0.46
TCOF1-207ENST00000504761 Q6ZT83 130 aa12.16□□□□□ -0.46
TCOF1-207ENST00000504761 MARC2Q969Z3 335 aa12.16□□□□□ -0.46
TCOF1-207ENST00000504761 A0A1B0GTI1 187 aa12.15□□□□□ -0.46
TCOF1-207ENST00000504761 OR5H1A6NKK0 313 aa12.15□□□□□ -0.46
TCOF1-207ENST00000504761 LGALS8O00214 317 aa12.15□□□□□ -0.46
TCOF1-207ENST00000504761 KCNAB3O43448 404 aa12.15□□□□□ -0.46
TCOF1-207ENST00000504761 CBR1P16152 277 aa12.15□□□□□ -0.46
TCOF1-207ENST00000504761 RCC1P18754 421 aaPredicted RBP12.15□□□□□ -0.46
TCOF1-207ENST00000504761 CD80P33681 288 aa12.15□□□□□ -0.46
TCOF1-207ENST00000504761 TOR2AQ5JU69 321 aa12.15□□□□□ -0.46
TCOF1-207ENST00000504761 C9orf106Q8NAJ2 232 aa12.15□□□□□ -0.46
TCOF1-207ENST00000504761 OR10P1Q8NGE3 313 aa12.15□□□□□ -0.46
TCOF1-207ENST00000504761 OR10S1Q8NGN2 331 aa12.15□□□□□ -0.46
TCOF1-207ENST00000504761 MRPL24Q96A35 216 aaKnown RBP12.15□□□□□ -0.46
TCOF1-207ENST00000504761 ADGRG7Q96K78 797 aa12.15□□□□□ -0.46
TCOF1-207ENST00000504761 SLC25A32Q9H2D1 315 aa12.15□□□□□ -0.46
TCOF1-207ENST00000504761 MYOZ1Q9NP98 299 aaPredicted RBP12.15□□□□□ -0.46
TCOF1-207ENST00000504761 RNF7Q9UBF6 113 aa12.15□□□□□ -0.46
TCOF1-207ENST00000504761 OPN4Q9UHM6 478 aa12.15□□□□□ -0.46
TCOF1-207ENST00000504761 DOCK10Q96BY6 2186 aa12.15□□□□□ -0.46
TCOF1-207ENST00000504761 ZNF716A6NP11 495 aa12.15□□□□□ -0.46
TCOF1-207ENST00000504761 SYNGR3O43761 229 aa12.15□□□□□ -0.46
TCOF1-207ENST00000504761 CTSDP07339 412 aaPredicted RBP12.15□□□□□ -0.46
TCOF1-207ENST00000504761 CELA3BP08861 270 aa12.15□□□□□ -0.46
TCOF1-207ENST00000504761 SCTP09683 121 aa12.15□□□□□ -0.46
TCOF1-207ENST00000504761 TLE4Q04727 773 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms