RNA–Protein interactions for RNA: ENST00000504526.1

TRAPPC11-203, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-203ENST00000504526 IFT22Q9H7X7 185 aa17.19■□□□□ 0.34
TRAPPC11-203ENST00000504526 ST3GAL6Q9Y274 331 aa17.19■□□□□ 0.34
TRAPPC11-203ENST00000504526 LSM2Q9Y333 95 aaKnown RBP17.19■□□□□ 0.34
TRAPPC11-203ENST00000504526 IGHV2-26A0A0B4J1V2 119 aa17.18■□□□□ 0.34
TRAPPC11-203ENST00000504526 TRAV24A0A0B4J272 114 aa17.18■□□□□ 0.34
TRAPPC11-203ENST00000504526 A0A1W2PPK0 400 aa17.18■□□□□ 0.34
TRAPPC11-203ENST00000504526 CLPSL1A2RUU4 121 aa17.18■□□□□ 0.34
TRAPPC11-203ENST00000504526 ZNF729A6NN14 1252 aaPredicted RBP17.18■□□□□ 0.34
TRAPPC11-203ENST00000504526 RGS10O43665 173 aa17.18■□□□□ 0.34
TRAPPC11-203ENST00000504526 GTF2F2P13984 249 aa17.18■□□□□ 0.34
TRAPPC11-203ENST00000504526 RBM11P57052 281 aaKnown RBP17.18■□□□□ 0.34
TRAPPC11-203ENST00000504526 PAX5Q02548 391 aa17.18■□□□□ 0.34
TRAPPC11-203ENST00000504526 MED22Q15528 200 aa17.18■□□□□ 0.34
TRAPPC11-203ENST00000504526 MPV17LQ2QL34 196 aa17.18■□□□□ 0.34
TRAPPC11-203ENST00000504526 PIGYQ3MUY2 71 aa17.18■□□□□ 0.34
TRAPPC11-203ENST00000504526 MINOS1Q5TGZ0 78 aa17.18■□□□□ 0.34
TRAPPC11-203ENST00000504526 OLFML2AQ68BL7 652 aa17.18■□□□□ 0.34
TRAPPC11-203ENST00000504526 JAGN1Q8N5M9 183 aa17.18■□□□□ 0.34
TRAPPC11-203ENST00000504526 OR5M11Q96RB7 305 aa17.18■□□□□ 0.34
TRAPPC11-203ENST00000504526 NKX3-1Q99801 234 aaPredicted RBP17.18■□□□□ 0.34
TRAPPC11-203ENST00000504526 MINOS1-NBL1R4GNA1 71 aa17.18■□□□□ 0.34
TRAPPC11-203ENST00000504526 MEGF11A6BM72 1044 aa17.17■□□□□ 0.34
TRAPPC11-203ENST00000504526 MAGEA13PA6NCF6 341 aa17.17■□□□□ 0.34
TRAPPC11-203ENST00000504526 VGLL3A8MV65 326 aa17.17■□□□□ 0.34
TRAPPC11-203ENST00000504526 MAS1P04201 325 aa17.17■□□□□ 0.34
TRAPPC11-203ENST00000504526 SERPINA2P20848 420 aa17.17■□□□□ 0.34
TRAPPC11-203ENST00000504526 CDK2P24941 298 aa17.17■□□□□ 0.34
TRAPPC11-203ENST00000504526 ACSM3Q53FZ2 586 aa17.17■□□□□ 0.34
TRAPPC11-203ENST00000504526 LHFPL4Q7Z7J7 247 aa17.17■□□□□ 0.34
TRAPPC11-203ENST00000504526 RTN4RL2Q86UN3 420 aa17.17■□□□□ 0.34
TRAPPC11-203ENST00000504526 ZNF565Q8N9K5 539 aa17.17■□□□□ 0.34
TRAPPC11-203ENST00000504526 OR4D6Q8NGJ1 314 aa17.17■□□□□ 0.34
TRAPPC11-203ENST00000504526 MRPS24Q96EL2 167 aaKnown RBP17.17■□□□□ 0.34
TRAPPC11-203ENST00000504526 RAB18Q9NP72 206 aa17.17■□□□□ 0.34
TRAPPC11-203ENST00000504526 MRPS28Q9Y2Q9 187 aaKnown RBP17.17■□□□□ 0.34
TRAPPC11-203ENST00000504526 HSPB6O14558 160 aa17.16■□□□□ 0.34
TRAPPC11-203ENST00000504526 PIN1P1O15428 100 aa17.16■□□□□ 0.34
TRAPPC11-203ENST00000504526 OR7C1O76099 320 aaPredicted RBP17.16■□□□□ 0.34
TRAPPC11-203ENST00000504526 ATP6V1G2O95670 118 aa17.16■□□□□ 0.34
TRAPPC11-203ENST00000504526 CRHBPP24387 322 aa17.16■□□□□ 0.34
TRAPPC11-203ENST00000504526 SLC22A6Q4U2R8 563 aa17.16■□□□□ 0.34
TRAPPC11-203ENST00000504526 UNQ9370/PRO34162Q6UXP9 181 aa17.16■□□□□ 0.34
TRAPPC11-203ENST00000504526 LIAT1Q6ZQX7 453 aa17.16■□□□□ 0.34
TRAPPC11-203ENST00000504526 SGCDQ92629 289 aa17.16■□□□□ 0.34
TRAPPC11-203ENST00000504526 UFD1Q92890 307 aa17.16■□□□□ 0.34
TRAPPC11-203ENST00000504526 MUL1Q969V5 352 aa17.16■□□□□ 0.34
TRAPPC11-203ENST00000504526 UQCC2Q9BRT2 126 aa17.16■□□□□ 0.34
TRAPPC11-203ENST00000504526 ISYNA1Q9NPH2 558 aa17.16■□□□□ 0.34
TRAPPC11-203ENST00000504526 ING3Q9NXR8 418 aa17.16■□□□□ 0.34
TRAPPC11-203ENST00000504526 BLOC1S6Q9UL45 172 aa17.16■□□□□ 0.34
TRAPPC11-203ENST00000504526 RAB26Q9ULW5 256 aa17.16■□□□□ 0.34
TRAPPC11-203ENST00000504526 ANK2Q01484 3957 aa17.16■□□□□ 0.34
TRAPPC11-203ENST00000504526 MEIKINA0A087WXM9 373 aa17.15■□□□□ 0.34
TRAPPC11-203ENST00000504526 RBM48Q5RL73 367 aaKnown RBP17.15■□□□□ 0.34
TRAPPC11-203ENST00000504526 PRAMEF5Q5TYX0 476 aa17.15■□□□□ 0.34
TRAPPC11-203ENST00000504526 AWAT2Q6E213 333 aa17.15■□□□□ 0.34
TRAPPC11-203ENST00000504526 GLIPR1L1Q6UWM5 242 aa17.15■□□□□ 0.34
TRAPPC11-203ENST00000504526 PRSS48Q7RTY5 328 aa17.15■□□□□ 0.34
TRAPPC11-203ENST00000504526 DTX3Q8N9I9 347 aa17.15■□□□□ 0.34
TRAPPC11-203ENST00000504526 ZNF596Q8TC21 504 aa17.15■□□□□ 0.34
TRAPPC11-203ENST00000504526 DPCDQ9BVM2 203 aaPredicted RBP17.15■□□□□ 0.34
TRAPPC11-203ENST00000504526 PPIL3Q9H2H8 161 aaKnown RBP17.15■□□□□ 0.34
TRAPPC11-203ENST00000504526 C16orf95Q9H693 158 aa17.15■□□□□ 0.34
TRAPPC11-203ENST00000504526 SPACA1Q9HBV2 294 aa17.15■□□□□ 0.34
TRAPPC11-203ENST00000504526 TCF7L1Q9HCS4 588 aa17.15■□□□□ 0.34
TRAPPC11-203ENST00000504526 ABCB10Q9NRK6 738 aa17.15■□□□□ 0.34
TRAPPC11-203ENST00000504526 KBTBD11-OT1A0A1B0GTJ5 212 aa17.14■□□□□ 0.33
TRAPPC11-203ENST00000504526 GEMIN2O14893 280 aaKnown RBP17.14■□□□□ 0.33
TRAPPC11-203ENST00000504526 MMP23AO75900 390 aa17.14■□□□□ 0.33
TRAPPC11-203ENST00000504526 TSPAN9O75954 239 aa17.14■□□□□ 0.33
TRAPPC11-203ENST00000504526 CD34P28906 385 aa17.14■□□□□ 0.33
TRAPPC11-203ENST00000504526 VHLP40337 213 aa17.14■□□□□ 0.33
TRAPPC11-203ENST00000504526 FAM189A2Q15884 450 aa17.14■□□□□ 0.33
TRAPPC11-203ENST00000504526 RSBN1Q5VWQ0 802 aaPredicted RBP17.14■□□□□ 0.33
TRAPPC11-203ENST00000504526 Q6ZSV7 163 aa17.14■□□□□ 0.33
TRAPPC11-203ENST00000504526 LYPD6Q86Y78 171 aa17.14■□□□□ 0.33
TRAPPC11-203ENST00000504526 ABHD12Q8N2K0 398 aa17.14■□□□□ 0.33
TRAPPC11-203ENST00000504526 SUMF2Q8NBJ7 301 aa17.14■□□□□ 0.33
TRAPPC11-203ENST00000504526 LINC01006Q8NI28 216 aa17.14■□□□□ 0.33
TRAPPC11-203ENST00000504526 NDNFQ8TB73 568 aa17.14■□□□□ 0.33
TRAPPC11-203ENST00000504526 PHYHIPQ92561 330 aa17.14■□□□□ 0.33
TRAPPC11-203ENST00000504526 CNBD2Q96M20 576 aa17.14■□□□□ 0.33
TRAPPC11-203ENST00000504526 TMED9Q9BVK6 235 aa17.14■□□□□ 0.33
TRAPPC11-203ENST00000504526 CCDC90BQ9GZT6 254 aa17.14■□□□□ 0.33
TRAPPC11-203ENST00000504526 GHRLQ9UBU3 117 aa17.14■□□□□ 0.33
TRAPPC11-203ENST00000504526 KIF25Q9UIL4 384 aa17.14■□□□□ 0.33
TRAPPC11-203ENST00000504526 RNF114Q9Y508 228 aa17.14■□□□□ 0.33
TRAPPC11-203ENST00000504526 CGB3P0DN86 165 aa17.13■□□□□ 0.33
TRAPPC11-203ENST00000504526 CGB7P0DN87 165 aa17.13■□□□□ 0.33
TRAPPC11-203ENST00000504526 HTR1DP28221 377 aa17.13■□□□□ 0.33
TRAPPC11-203ENST00000504526 GLP1RP43220 463 aa17.13■□□□□ 0.33
TRAPPC11-203ENST00000504526 DYNLT3P51808 116 aa17.13■□□□□ 0.33
TRAPPC11-203ENST00000504526 TRAM1Q15629 374 aa17.13■□□□□ 0.33
TRAPPC11-203ENST00000504526 SSX2Q16385 188 aa17.13■□□□□ 0.33
TRAPPC11-203ENST00000504526 LY6EQ16553 131 aa17.13■□□□□ 0.33
TRAPPC11-203ENST00000504526 SLC35E4Q6ICL7 350 aa17.13■□□□□ 0.33
TRAPPC11-203ENST00000504526 PIFOQ8TCI5 191 aa17.13■□□□□ 0.33
TRAPPC11-203ENST00000504526 WFDC12Q8WWY7 111 aa17.13■□□□□ 0.33
TRAPPC11-203ENST00000504526 PITPNC1Q9UKF7 332 aa17.13■□□□□ 0.33
TRAPPC11-203ENST00000504526 A0A087X0M5 115 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms