RNA–Protein interactions for RNA: ENST00000504078.1

USP46-205, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 4

Gene USP46, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-205ENST00000504078 ZNF573Q86YE8 665 aa2.78□□□□□ -1.96
USP46-205ENST00000504078 HIST2H2ABQ8IUE6 130 aaPredicted RBP2.78□□□□□ -1.96
USP46-205ENST00000504078 COMMD1Q8N668 190 aa2.78□□□□□ -1.96
USP46-205ENST00000504078 Q8N9W7 124 aa2.78□□□□□ -1.96
USP46-205ENST00000504078 AQP11Q8NBQ7 271 aa2.78□□□□□ -1.96
USP46-205ENST00000504078 OR5D18Q8NGL1 313 aa2.78□□□□□ -1.96
USP46-205ENST00000504078 OR6Q1Q8NGQ2 317 aa2.78□□□□□ -1.96
USP46-205ENST00000504078 IL17DQ8TAD2 202 aa2.78□□□□□ -1.96
USP46-205ENST00000504078 GNPDA2Q8TDQ7 276 aa2.78□□□□□ -1.96
USP46-205ENST00000504078 TLCD1Q96CP7 247 aa2.78□□□□□ -1.96
USP46-205ENST00000504078 COQ2Q96H96 371 aa2.78□□□□□ -1.96
USP46-205ENST00000504078 CEP19Q96LK0 163 aa2.78□□□□□ -1.96
USP46-205ENST00000504078 SPACA5Q96QH8 159 aa2.78□□□□□ -1.96
USP46-205ENST00000504078 KCTD14Q9BQ13 255 aaPredicted RBP2.78□□□□□ -1.96
USP46-205ENST00000504078 NABP2Q9BQ15 211 aa2.78□□□□□ -1.96
USP46-205ENST00000504078 ST6GALNAC5Q9BVH7 336 aa2.78□□□□□ -1.96
USP46-205ENST00000504078 PBOV1Q9GZY1 135 aa2.78□□□□□ -1.96
USP46-205ENST00000504078 RGCCQ9H4X1 137 aa2.78□□□□□ -1.96
USP46-205ENST00000504078 ANKRD19PQ9H560 264 aa2.78□□□□□ -1.96
USP46-205ENST00000504078 TUBA4BQ9H853 241 aa2.78□□□□□ -1.96
USP46-205ENST00000504078 VIPAS39Q9H9C1 493 aa2.78□□□□□ -1.96
USP46-205ENST00000504078 ABCB9Q9NP78 766 aa2.78□□□□□ -1.96
USP46-205ENST00000504078 MRGBPQ9NV56 204 aa2.78□□□□□ -1.96
USP46-205ENST00000504078 INTS9Q9NV88 658 aaKnown RBP2.78□□□□□ -1.96
USP46-205ENST00000504078 FAM206AQ9NX38 181 aa2.78□□□□□ -1.96
USP46-205ENST00000504078 MTCH1Q9NZJ7 389 aa2.78□□□□□ -1.96
USP46-205ENST00000504078 ACTR3BQ9P1U1 418 aa2.78□□□□□ -1.96
USP46-205ENST00000504078 ENPP5Q9UJA9 477 aa2.78□□□□□ -1.96
USP46-205ENST00000504078 IKZF2Q9UKS7 526 aa2.78□□□□□ -1.96
USP46-205ENST00000504078 COPS3Q9UNS2 423 aa2.78□□□□□ -1.96
USP46-205ENST00000504078 SLC7A11Q9UPY5 501 aa2.78□□□□□ -1.96
USP46-205ENST00000504078 GSTK1Q9Y2Q3 226 aa2.78□□□□□ -1.96
USP46-205ENST00000504078 RYR1P21817 5038 aa2.78□□□□□ -1.96
USP46-205ENST00000504078 ABCA13Q86UQ4 5058 aa2.78□□□□□ -1.97
USP46-205ENST00000504078 IGHV3-43A0A0B4J1X8 118 aa2.77□□□□□ -1.97
USP46-205ENST00000504078 A0A1W2PN81 502 aa2.77□□□□□ -1.97
USP46-205ENST00000504078 ODAMA1E959 279 aa2.77□□□□□ -1.97
USP46-205ENST00000504078 MAGEA13PA6NCF6 341 aa2.77□□□□□ -1.97
USP46-205ENST00000504078 IZUMO1RA6ND01 250 aa2.77□□□□□ -1.97
USP46-205ENST00000504078 BBIP1A8MTZ0 92 aa2.77□□□□□ -1.97
USP46-205ENST00000504078 LOC110117498-PIK3R3F6TDL0 507 aa2.77□□□□□ -1.97
USP46-205ENST00000504078 LINC01619G3V211 115 aa2.77□□□□□ -1.97
USP46-205ENST00000504078 LY6LH3BQJ8 138 aa2.77□□□□□ -1.97
USP46-205ENST00000504078 H3BUI4 141 aa2.77□□□□□ -1.97
USP46-205ENST00000504078 I3L521 148 aa2.77□□□□□ -1.97
USP46-205ENST00000504078 SLC31A2O15432 143 aa2.77□□□□□ -1.97
USP46-205ENST00000504078 FGF16O43320 207 aa2.77□□□□□ -1.97
USP46-205ENST00000504078 RRP9O43818 475 aaKnown RBP2.77□□□□□ -1.97
USP46-205ENST00000504078 DHRS3O75911 302 aa2.77□□□□□ -1.97
USP46-205ENST00000504078 APOL3O95236 402 aa2.77□□□□□ -1.97
USP46-205ENST00000504078 OR2H2O95918 312 aa2.77□□□□□ -1.97
USP46-205ENST00000504078 IGHG4P01861 327 aa2.77□□□□□ -1.97
USP46-205ENST00000504078 TTRP02766 147 aa2.77□□□□□ -1.97
USP46-205ENST00000504078 IGHV3-43DP0DP04 118 aa2.77□□□□□ -1.97
USP46-205ENST00000504078 H2AFXP16104 143 aaPredicted RBP2.77□□□□□ -1.97
USP46-205ENST00000504078 PSMB8P28062 276 aa2.77□□□□□ -1.97
USP46-205ENST00000504078 BLVRBP30043 206 aaPredicted RBP2.77□□□□□ -1.97
USP46-205ENST00000504078 CHRNA7P36544 502 aa2.77□□□□□ -1.97
USP46-205ENST00000504078 CDX1P47902 265 aaPredicted RBP2.77□□□□□ -1.97
USP46-205ENST00000504078 F2RL1P55085 397 aa2.77□□□□□ -1.97
USP46-205ENST00000504078 ISL1P61371 349 aa2.77□□□□□ -1.97
USP46-205ENST00000504078 ERVK11-1P61568 191 aa2.77□□□□□ -1.97
USP46-205ENST00000504078 SUMO1P63165 101 aaKnown RBP2.77□□□□□ -1.97
USP46-205ENST00000504078 MEF2CQ06413 473 aaPredicted RBP2.77□□□□□ -1.97
USP46-205ENST00000504078 RIPPLY1Q0D2K3 151 aa2.77□□□□□ -1.97
USP46-205ENST00000504078 TSPAN31Q12999 210 aa2.77□□□□□ -1.97
USP46-205ENST00000504078 KPNB1Q14974 876 aaKnown RBP2.77□□□□□ -1.97
USP46-205ENST00000504078 SNCBQ16143 134 aa2.77□□□□□ -1.97
USP46-205ENST00000504078 C17orf58Q2M2W7 97 aa2.77□□□□□ -1.97
USP46-205ENST00000504078 KRBOX4Q5JUW0 171 aa2.77□□□□□ -1.97
USP46-205ENST00000504078 CLVS2Q5SYC1 327 aa2.77□□□□□ -1.97
USP46-205ENST00000504078 BCL2L15Q5TBC7 163 aa2.77□□□□□ -1.97
USP46-205ENST00000504078 LPCAT4Q643R3 524 aa2.77□□□□□ -1.97
USP46-205ENST00000504078 CCDC144NLQ6NUI1 221 aa2.77□□□□□ -1.97
USP46-205ENST00000504078 HEPN1Q6WQI6 88 aa2.77□□□□□ -1.97
USP46-205ENST00000504078 ZBTB49Q6ZSB9 765 aa2.77□□□□□ -1.97
USP46-205ENST00000504078 SLC15A3Q8IY34 581 aa2.77□□□□□ -1.97
USP46-205ENST00000504078 TCEANCQ8N8B7 351 aa2.77□□□□□ -1.97
USP46-205ENST00000504078 CLRN3Q8NCR9 226 aa2.77□□□□□ -1.97
USP46-205ENST00000504078 OR5A2Q8NGI9 324 aa2.77□□□□□ -1.97
USP46-205ENST00000504078 OR4D6Q8NGJ1 314 aa2.77□□□□□ -1.97
USP46-205ENST00000504078 OR13A1Q8NGR1 328 aa2.77□□□□□ -1.97
USP46-205ENST00000504078 OR10X1Q8NGY0 326 aa2.77□□□□□ -1.97
USP46-205ENST00000504078 OTOSQ8NHW6 89 aa2.77□□□□□ -1.97
USP46-205ENST00000504078 RFESDQ8TAC1 157 aa2.77□□□□□ -1.97
USP46-205ENST00000504078 MRGPRDQ8TDS7 321 aa2.77□□□□□ -1.97
USP46-205ENST00000504078 ABHD5Q8WTS1 349 aa2.77□□□□□ -1.97
USP46-205ENST00000504078 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP2.77□□□□□ -1.97
USP46-205ENST00000504078 EME1Q96AY2 570 aa2.77□□□□□ -1.97
USP46-205ENST00000504078 CYYR1Q96J86 154 aa2.77□□□□□ -1.97
USP46-205ENST00000504078 C7orf34Q96L11 122 aa2.77□□□□□ -1.97
USP46-205ENST00000504078 SNX22Q96L94 193 aa2.77□□□□□ -1.97
USP46-205ENST00000504078 SH3GL1Q99961 368 aa2.77□□□□□ -1.97
USP46-205ENST00000504078 RASL11BQ9BPW5 248 aa2.77□□□□□ -1.97
USP46-205ENST00000504078 NMNAT2Q9BZQ4 307 aa2.77□□□□□ -1.97
USP46-205ENST00000504078 ABCG5Q9H222 651 aa2.77□□□□□ -1.97
USP46-205ENST00000504078 GAL3ST2Q9H3Q3 398 aa2.77□□□□□ -1.97
USP46-205ENST00000504078 PLEKHA1Q9HB21 404 aa2.77□□□□□ -1.97
USP46-205ENST00000504078 TMBIM4Q9HC24 238 aa2.77□□□□□ -1.97
USP46-205ENST00000504078 EXOSC4Q9NPD3 245 aaKnown RBP2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms