RNA–Protein interactions for RNA: ENST00000503742.5

UBE2D3-216, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 1 (best)

Gene UBE2D3, Length 1,977 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-216ENST00000503742 SCTP09683 121 aa18.09■□□□□ 0.49
UBE2D3-216ENST00000503742 KIR2DS4P43632 304 aa18.09■□□□□ 0.49
UBE2D3-216ENST00000503742 FXYD4P59646 89 aa18.09■□□□□ 0.49
UBE2D3-216ENST00000503742 CYCSP99999 105 aaKnown RBP18.09■□□□□ 0.49
UBE2D3-216ENST00000503742 KIR2DS1Q14954 304 aa18.09■□□□□ 0.49
UBE2D3-216ENST00000503742 LRRC37A5PQ49AS3 106 aa18.09■□□□□ 0.49
UBE2D3-216ENST00000503742 C5orf24Q7Z6I8 188 aa18.09■□□□□ 0.49
UBE2D3-216ENST00000503742 SLC38A6Q8IZM9 456 aa18.09■□□□□ 0.49
UBE2D3-216ENST00000503742 POC1AQ8NBT0 407 aa18.09■□□□□ 0.49
UBE2D3-216ENST00000503742 ARL6Q9H0F7 186 aa18.09■□□□□ 0.49
UBE2D3-216ENST00000503742 RDH8Q9NYR8 311 aa18.09■□□□□ 0.49
UBE2D3-216ENST00000503742 TNFSF18Q9UNG2 199 aa18.09■□□□□ 0.49
UBE2D3-216ENST00000503742 ZNF835Q9Y2P0 537 aa18.09■□□□□ 0.49
UBE2D3-216ENST00000503742 PPYP01298 95 aa18.08■□□□□ 0.49
UBE2D3-216ENST00000503742 ZNF44P15621 663 aa18.08■□□□□ 0.49
UBE2D3-216ENST00000503742 HERPUD1Q15011 391 aa18.08■□□□□ 0.49
UBE2D3-216ENST00000503742 FAM209AQ5JX71 171 aa18.08■□□□□ 0.49
UBE2D3-216ENST00000503742 SPERTQ8NA61 448 aa18.08■□□□□ 0.49
UBE2D3-216ENST00000503742 MUCL1Q96DR8 90 aa18.08■□□□□ 0.49
UBE2D3-216ENST00000503742 RSRP1Q9BUV0 290 aa18.08■□□□□ 0.49
UBE2D3-216ENST00000503742 C1orf123Q9NWV4 160 aa18.08■□□□□ 0.49
UBE2D3-216ENST00000503742 TREM2Q9NZC2 230 aa18.08■□□□□ 0.49
UBE2D3-216ENST00000503742 A0A0G2JNJ9 132 aa18.08■□□□□ 0.48
UBE2D3-216ENST00000503742 IGHV3-64DA0A0J9YX35 117 aa18.08■□□□□ 0.48
UBE2D3-216ENST00000503742 NXPH2O95156 264 aa18.08■□□□□ 0.48
UBE2D3-216ENST00000503742 OR2H2O95918 312 aa18.08■□□□□ 0.48
UBE2D3-216ENST00000503742 RBMXP38159 391 aaKnown RBP18.08■□□□□ 0.48
UBE2D3-216ENST00000503742 SHEQ5VZ18 495 aa18.08■□□□□ 0.48
UBE2D3-216ENST00000503742 SUN5Q8TC36 379 aa18.08■□□□□ 0.48
UBE2D3-216ENST00000503742 GALNT14Q96FL9 552 aa18.08■□□□□ 0.48
UBE2D3-216ENST00000503742 PIGMQ9H3S5 423 aa18.08■□□□□ 0.48
UBE2D3-216ENST00000503742 Q9UFV3 132 aa18.08■□□□□ 0.48
UBE2D3-216ENST00000503742 TEX13DA0A0J9YY54 714 aaPredicted RBP18.07■□□□□ 0.48
UBE2D3-216ENST00000503742 POM121CA8CG34 1229 aa18.07■□□□□ 0.48
UBE2D3-216ENST00000503742 MPTX1A8MV57 137 aa18.07■□□□□ 0.48
UBE2D3-216ENST00000503742 C1QTNF9BB2RNN3 333 aa18.07■□□□□ 0.48
UBE2D3-216ENST00000503742 M0R1B8 84 aa18.07■□□□□ 0.48
UBE2D3-216ENST00000503742 SLC33A1O00400 549 aaPredicted RBP18.07■□□□□ 0.48
UBE2D3-216ENST00000503742 TMPRSS3P57727 454 aa18.07■□□□□ 0.48
UBE2D3-216ENST00000503742 HERV-K104P61576 105 aa18.07■□□□□ 0.48
UBE2D3-216ENST00000503742 MSMPQ1L6U9 139 aa18.07■□□□□ 0.48
UBE2D3-216ENST00000503742 ABCA11PQ4W5N1 156 aa18.07■□□□□ 0.48
UBE2D3-216ENST00000503742 SPIN3Q5JUX0 258 aa18.07■□□□□ 0.48
UBE2D3-216ENST00000503742 RGS7BPQ6MZT1 257 aaPredicted RBP18.07■□□□□ 0.48
UBE2D3-216ENST00000503742 GFRALQ6UXV0 394 aa18.07■□□□□ 0.48
UBE2D3-216ENST00000503742 ZGRF1Q86YA3 2104 aa18.07■□□□□ 0.48
UBE2D3-216ENST00000503742 SNRNP40Q96DI7 357 aaKnown RBP18.07■□□□□ 0.48
UBE2D3-216ENST00000503742 NAA60Q9H7X0 242 aa18.07■□□□□ 0.48
UBE2D3-216ENST00000503742 SLC2A9Q9NRM0 540 aa18.07■□□□□ 0.48
UBE2D3-216ENST00000503742 PTPRQQ9UMZ3 2332 aa18.07■□□□□ 0.48
UBE2D3-216ENST00000503742 IGKV1-6A0A0C4DH72 117 aa18.06■□□□□ 0.48
UBE2D3-216ENST00000503742 TK1P04183 234 aa18.06■□□□□ 0.48
UBE2D3-216ENST00000503742 CTXN2P0C2S0 81 aa18.06■□□□□ 0.48
UBE2D3-216ENST00000503742 BMP5P22003 454 aa18.06■□□□□ 0.48
UBE2D3-216ENST00000503742 PSMB6P28072 239 aa18.06■□□□□ 0.48
UBE2D3-216ENST00000503742 MDH2P40926 338 aaKnown RBP18.06■□□□□ 0.48
UBE2D3-216ENST00000503742 FAM27E3Q08E93 113 aa18.06■□□□□ 0.48
UBE2D3-216ENST00000503742 ZNF345Q14585 488 aa18.06■□□□□ 0.48
UBE2D3-216ENST00000503742 GAPTQ8N292 157 aa18.06■□□□□ 0.48
UBE2D3-216ENST00000503742 RTN4IP1Q8WWV3 396 aaPredicted RBP18.06■□□□□ 0.48
UBE2D3-216ENST00000503742 OR10C1Q96KK4 312 aa18.06■□□□□ 0.48
UBE2D3-216ENST00000503742 MSL2Q9HCI7 577 aa18.06■□□□□ 0.48
UBE2D3-216ENST00000503742 RASL12Q9NYN1 266 aa18.06■□□□□ 0.48
UBE2D3-216ENST00000503742 UBQLN2Q9UHD9 624 aa18.06■□□□□ 0.48
UBE2D3-216ENST00000503742 TUBAL3A6NHL2 446 aa18.06■□□□□ 0.48
UBE2D3-216ENST00000503742 RP2O75695 350 aa18.06■□□□□ 0.48
UBE2D3-216ENST00000503742 TUSC2O75896 110 aa18.06■□□□□ 0.48
UBE2D3-216ENST00000503742 KCNJ3P48549 501 aa18.06■□□□□ 0.48
UBE2D3-216ENST00000503742 NKX6-1P78426 367 aaPredicted RBP18.06■□□□□ 0.48
UBE2D3-216ENST00000503742 IL15RAQ13261 267 aa18.06■□□□□ 0.48
UBE2D3-216ENST00000503742 CLLU1Q5K131 121 aa18.06■□□□□ 0.48
UBE2D3-216ENST00000503742 MRGPRGQ86SM5 289 aa18.06■□□□□ 0.48
UBE2D3-216ENST00000503742 OR5T2Q8NGG2 359 aa18.06■□□□□ 0.48
UBE2D3-216ENST00000503742 METTL8Q9H825 291 aaKnown RBP18.06■□□□□ 0.48
UBE2D3-216ENST00000503742 MAB21L2Q9Y586 359 aa18.06■□□□□ 0.48
UBE2D3-216ENST00000503742 TRBV6-7A0A0A0MS04 114 aa18.05■□□□□ 0.48
UBE2D3-216ENST00000503742 A0A0D9SG52 128 aa18.05■□□□□ 0.48
UBE2D3-216ENST00000503742 RNF222A6NCQ9 220 aa18.05■□□□□ 0.48
UBE2D3-216ENST00000503742 SIRPB1O00241 398 aa18.05■□□□□ 0.48
UBE2D3-216ENST00000503742 OR2F2O95006 317 aa18.05■□□□□ 0.48
UBE2D3-216ENST00000503742 ZNF250P15622 560 aa18.05■□□□□ 0.48
UBE2D3-216ENST00000503742 OR2F1Q13607 317 aa18.05■□□□□ 0.48
UBE2D3-216ENST00000503742 TMEM187Q14656 261 aa18.05■□□□□ 0.48
UBE2D3-216ENST00000503742 PAN3Q58A45 887 aaKnown RBP18.05■□□□□ 0.48
UBE2D3-216ENST00000503742 ZNF826PQ6ZT77 177 aa18.05■□□□□ 0.48
UBE2D3-216ENST00000503742 OR8H3Q8N146 312 aa18.05■□□□□ 0.48
UBE2D3-216ENST00000503742 KCNRGQ8N5I3 272 aa18.05■□□□□ 0.48
UBE2D3-216ENST00000503742 THAP6Q8TBB0 222 aa18.05■□□□□ 0.48
UBE2D3-216ENST00000503742 C2orf50Q96LR7 162 aa18.05■□□□□ 0.48
UBE2D3-216ENST00000503742 KCNIP3Q9Y2W7 256 aa18.05■□□□□ 0.48
UBE2D3-216ENST00000503742 SH2D1BO14796 132 aa18.04■□□□□ 0.48
UBE2D3-216ENST00000503742 BET1O15155 118 aa18.04■□□□□ 0.48
UBE2D3-216ENST00000503742 CRYAAP02489 173 aa18.04■□□□□ 0.48
UBE2D3-216ENST00000503742 HOXB5P09067 269 aa18.04■□□□□ 0.48
UBE2D3-216ENST00000503742 GLRXP35754 106 aa18.04■□□□□ 0.48
UBE2D3-216ENST00000503742 PHLDA2Q53GA4 152 aa18.04■□□□□ 0.48
UBE2D3-216ENST00000503742 PCSK4Q6UW60 755 aa18.04■□□□□ 0.48
UBE2D3-216ENST00000503742 PLPPR1Q8TBJ4 325 aa18.04■□□□□ 0.48
UBE2D3-216ENST00000503742 MBD2Q9UBB5 411 aa18.04■□□□□ 0.48
UBE2D3-216ENST00000503742 DIRAS3O95661 229 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms