RNA–Protein interactions for RNA: ENST00000498540.2

TRAF4-212, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 748 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-212ENST00000498540 OPALINQ96PE5 141 aa11.53□□□□□ -0.56
TRAF4-212ENST00000498540 HUWE1Q7Z6Z7 4374 aaKnown RBP11.53□□□□□ -0.56
TRAF4-212ENST00000498540 HSPB6O14558 160 aa11.52□□□□□ -0.57
TRAF4-212ENST00000498540 FKBP6O75344 327 aa11.52□□□□□ -0.57
TRAF4-212ENST00000498540 SULT1C4O75897 302 aa11.52□□□□□ -0.57
TRAF4-212ENST00000498540 PRKACBP22694 351 aa11.52□□□□□ -0.57
TRAF4-212ENST00000498540 CHATP28329 748 aa11.52□□□□□ -0.57
TRAF4-212ENST00000498540 GNG10P50151 68 aa11.52□□□□□ -0.57
TRAF4-212ENST00000498540 BNIP1Q12981 228 aa11.52□□□□□ -0.57
TRAF4-212ENST00000498540 MADCAM1Q13477 382 aa11.52□□□□□ -0.57
TRAF4-212ENST00000498540 C12orf73Q69YU5 71 aa11.52□□□□□ -0.57
TRAF4-212ENST00000498540 UTS2BQ765I0 119 aa11.52□□□□□ -0.57
TRAF4-212ENST00000498540 CHST4Q8NCG5 386 aa11.52□□□□□ -0.57
TRAF4-212ENST00000498540 OR10H4Q8NGA5 316 aa11.52□□□□□ -0.57
TRAF4-212ENST00000498540 OR13A1Q8NGR1 328 aa11.52□□□□□ -0.57
TRAF4-212ENST00000498540 SPSB1Q96BD6 273 aa11.52□□□□□ -0.57
TRAF4-212ENST00000498540 FGGYQ96C11 551 aa11.52□□□□□ -0.57
TRAF4-212ENST00000498540 HRASLS5Q96KN8 279 aa11.52□□□□□ -0.57
TRAF4-212ENST00000498540 CALYQ9NYX4 217 aa11.52□□□□□ -0.57
TRAF4-212ENST00000498540 OR6C3Q9NZP0 311 aa11.52□□□□□ -0.57
TRAF4-212ENST00000498540 PSG11Q9UQ72 335 aa11.52□□□□□ -0.57
TRAF4-212ENST00000498540 ZNF256Q9Y2P7 627 aaPredicted RBP11.52□□□□□ -0.57
TRAF4-212ENST00000498540 EPPK1P58107 5090 aaKnown RBP11.52□□□□□ -0.57
TRAF4-212ENST00000498540 ZAR1LA6NP61 321 aa11.51□□□□□ -0.57
TRAF4-212ENST00000498540 AP4M1O00189 453 aa11.51□□□□□ -0.57
TRAF4-212ENST00000498540 OR2T7P0C7T2 308 aa11.51□□□□□ -0.57
TRAF4-212ENST00000498540 T-ENOLP0DO92 83 aa11.51□□□□□ -0.57
TRAF4-212ENST00000498540 ZNF20P17024 532 aa11.51□□□□□ -0.57
TRAF4-212ENST00000498540 GPR12P47775 334 aa11.51□□□□□ -0.57
TRAF4-212ENST00000498540 RAB7AP51149 207 aa11.51□□□□□ -0.57
TRAF4-212ENST00000498540 ISL1P61371 349 aa11.51□□□□□ -0.57
TRAF4-212ENST00000498540 KIR2DS1Q14954 304 aa11.51□□□□□ -0.57
TRAF4-212ENST00000498540 CDK5R1Q15078 307 aa11.51□□□□□ -0.57
TRAF4-212ENST00000498540 LTC4SQ16873 150 aa11.51□□□□□ -0.57
TRAF4-212ENST00000498540 PNLIPRP3Q17RR3 467 aa11.51□□□□□ -0.57
TRAF4-212ENST00000498540 TP53I3Q53FA7 332 aa11.51□□□□□ -0.57
TRAF4-212ENST00000498540 CXorf66Q5JRM2 361 aaPredicted RBP11.51□□□□□ -0.57
TRAF4-212ENST00000498540 OR8H3Q8N146 312 aa11.51□□□□□ -0.57
TRAF4-212ENST00000498540 Q8NFD4 153 aa11.51□□□□□ -0.57
TRAF4-212ENST00000498540 OR51T1Q8NGJ9 327 aa11.51□□□□□ -0.57
TRAF4-212ENST00000498540 RCHY1Q96PM5 261 aa11.51□□□□□ -0.57
TRAF4-212ENST00000498540 NEK6Q9HC98 313 aa11.51□□□□□ -0.57
TRAF4-212ENST00000498540 IDI2-AS1Q9NZ38 188 aa11.51□□□□□ -0.57
TRAF4-212ENST00000498540 WARS2Q9UGM6 360 aaKnown RBP11.51□□□□□ -0.57
TRAF4-212ENST00000498540 KIF25Q9UIL4 384 aa11.51□□□□□ -0.57
TRAF4-212ENST00000498540 GNG8Q9UK08 70 aa11.51□□□□□ -0.57
TRAF4-212ENST00000498540 IGHV3-72A0A0B4J1Y9 119 aa11.5□□□□□ -0.57
TRAF4-212ENST00000498540 A0A1W2PPE3 182 aa11.5□□□□□ -0.57
TRAF4-212ENST00000498540 DEGS1O15121 323 aa11.5□□□□□ -0.57
TRAF4-212ENST00000498540 IL1AP01583 271 aa11.5□□□□□ -0.57
TRAF4-212ENST00000498540 HOXB6P17509 224 aaKnown RBP11.5□□□□□ -0.57
TRAF4-212ENST00000498540 CALB2P22676 271 aa11.5□□□□□ -0.57
TRAF4-212ENST00000498540 CDX1P47902 265 aaPredicted RBP11.5□□□□□ -0.57
TRAF4-212ENST00000498540 GYS2P54840 703 aa11.5□□□□□ -0.57
TRAF4-212ENST00000498540 GNGT1P63211 74 aa11.5□□□□□ -0.57
TRAF4-212ENST00000498540 FOXE3Q13461 319 aa11.5□□□□□ -0.57
TRAF4-212ENST00000498540 GPR50Q13585 617 aa11.5□□□□□ -0.57
TRAF4-212ENST00000498540 ZNF260Q3ZCT1 412 aa11.5□□□□□ -0.57
TRAF4-212ENST00000498540 SPATA24Q86W54 205 aa11.5□□□□□ -0.57
TRAF4-212ENST00000498540 SBSPONQ8IVN8 264 aa11.5□□□□□ -0.57
TRAF4-212ENST00000498540 RNF152Q8N8N0 203 aa11.5□□□□□ -0.57
TRAF4-212ENST00000498540 OR13C9Q8NGT0 318 aa11.5□□□□□ -0.57
TRAF4-212ENST00000498540 OR10AC1Q8NH08 325 aa11.5□□□□□ -0.57
TRAF4-212ENST00000498540 HAVCR2Q8TDQ0 301 aa11.5□□□□□ -0.57
TRAF4-212ENST00000498540 NRBF2Q96F24 287 aa11.5□□□□□ -0.57
TRAF4-212ENST00000498540 MBOAT4Q96T53 435 aa11.5□□□□□ -0.57
TRAF4-212ENST00000498540 THTPAQ9BU02 230 aa11.5□□□□□ -0.57
TRAF4-212ENST00000498540 OSBPL10Q9BXB5 764 aa11.5□□□□□ -0.57
TRAF4-212ENST00000498540 ABCG5Q9H222 651 aa11.5□□□□□ -0.57
TRAF4-212ENST00000498540 KRT84Q9NSB2 600 aa11.5□□□□□ -0.57
TRAF4-212ENST00000498540 SACSQ9NZJ4 4579 aa11.5□□□□□ -0.57
TRAF4-212ENST00000498540 MEIKINA0A087WXM9 373 aa11.49□□□□□ -0.57
TRAF4-212ENST00000498540 NCBP2LA6PVI3 153 aaKnown RBP11.49□□□□□ -0.57
TRAF4-212ENST00000498540 HSD17B6O14756 317 aa11.49□□□□□ -0.57
TRAF4-212ENST00000498540 OCM2P0CE71 109 aa11.49□□□□□ -0.57
TRAF4-212ENST00000498540 OCMP0CE72 109 aaPredicted RBP11.49□□□□□ -0.57
TRAF4-212ENST00000498540 HTR1FP30939 366 aa11.49□□□□□ -0.57
TRAF4-212ENST00000498540 REG1BP48304 166 aa11.49□□□□□ -0.57
TRAF4-212ENST00000498540 ZNF85Q03923 595 aa11.49□□□□□ -0.57
TRAF4-212ENST00000498540 FHL3Q13643 280 aa11.49□□□□□ -0.57
TRAF4-212ENST00000498540 EBI3Q14213 229 aa11.49□□□□□ -0.57
TRAF4-212ENST00000498540 TMEM244Q5VVB8 128 aa11.49□□□□□ -0.57
TRAF4-212ENST00000498540 FAM220AQ7Z4H9 259 aa11.49□□□□□ -0.57
TRAF4-212ENST00000498540 TGIF2LXQ8IUE1 241 aa11.49□□□□□ -0.57
TRAF4-212ENST00000498540 Q8N6K4 173 aa11.49□□□□□ -0.57
TRAF4-212ENST00000498540 ZNF565Q8N9K5 539 aa11.49□□□□□ -0.57
TRAF4-212ENST00000498540 Q8N9W7 124 aa11.49□□□□□ -0.57
TRAF4-212ENST00000498540 OR51A4Q8NGJ6 313 aa11.49□□□□□ -0.57
TRAF4-212ENST00000498540 OR10X1Q8NGY0 326 aa11.49□□□□□ -0.57
TRAF4-212ENST00000498540 OR2G2Q8NGZ5 317 aa11.49□□□□□ -0.57
TRAF4-212ENST00000498540 RFESDQ8TAC1 157 aa11.49□□□□□ -0.57
TRAF4-212ENST00000498540 EAF1Q96JC9 268 aaPredicted RBP11.49□□□□□ -0.57
TRAF4-212ENST00000498540 LINC00574Q9H8X3 128 aa11.49□□□□□ -0.57
TRAF4-212ENST00000498540 RHOFQ9HBH0 211 aa11.49□□□□□ -0.57
TRAF4-212ENST00000498540 LIN7CQ9NUP9 197 aaKnown RBP11.49□□□□□ -0.57
TRAF4-212ENST00000498540 SMAD5-AS1Q9Y6J3 95 aa11.49□□□□□ -0.57
TRAF4-212ENST00000498540 LYSTQ99698 3801 aa11.48□□□□□ -0.57
TRAF4-212ENST00000498540 TRAV24A0A0B4J272 114 aa11.48□□□□□ -0.57
TRAF4-212ENST00000498540 IGHV1-3A0A0C4DH29 117 aa11.48□□□□□ -0.57
TRAF4-212ENST00000498540 LCE6AA0A183 80 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 96.1 ms