RNA–Protein interactions for RNA: ENST00000498431.5

MUC1-220, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best)

Gene MUC1, Length 667 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-220ENST00000498431 C5orf56Q8N8D9 126 aa12.66□□□□□ -0.38
MUC1-220ENST00000498431 CHPT1Q8WUD6 406 aa12.66□□□□□ -0.38
MUC1-220ENST00000498431 CYGBQ8WWM9 190 aa12.66□□□□□ -0.38
MUC1-220ENST00000498431 CREB3L1Q96BA8 519 aa12.66□□□□□ -0.38
MUC1-220ENST00000498431 IL4I1Q96RQ9 567 aa12.66□□□□□ -0.38
MUC1-220ENST00000498431 PPIL3Q9H2H8 161 aaKnown RBP12.66□□□□□ -0.38
MUC1-220ENST00000498431 EXOSC4Q9NPD3 245 aaKnown RBP12.66□□□□□ -0.38
MUC1-220ENST00000498431 ZFP57Q9NU63 452 aa12.66□□□□□ -0.38
MUC1-220ENST00000498431 IMPAD1Q9NX62 359 aa12.66□□□□□ -0.38
MUC1-220ENST00000498431 GLS2Q9UI32 602 aa12.66□□□□□ -0.38
MUC1-220ENST00000498431 A0A1W2PPI3 338 aa12.65□□□□□ -0.38
MUC1-220ENST00000498431 A0A1W2PQL4 384 aaPredicted RBP12.65□□□□□ -0.38
MUC1-220ENST00000498431 LINC01548A6NM66 108 aa12.65□□□□□ -0.38
MUC1-220ENST00000498431 SERPINE3A8MV23 424 aa12.65□□□□□ -0.38
MUC1-220ENST00000498431 OOSP1A8MZH6 123 aa12.65□□□□□ -0.38
MUC1-220ENST00000498431 SH2D1BO14796 132 aa12.65□□□□□ -0.38
MUC1-220ENST00000498431 SERPINA3P01011 423 aa12.65□□□□□ -0.38
MUC1-220ENST00000498431 IGHV3-7P01780 117 aa12.65□□□□□ -0.38
MUC1-220ENST00000498431 FAM106CPP0CH98 169 aa12.65□□□□□ -0.38
MUC1-220ENST00000498431 NFYBP25208 207 aa12.65□□□□□ -0.38
MUC1-220ENST00000498431 KIR3DL2P43630 455 aa12.65□□□□□ -0.38
MUC1-220ENST00000498431 PRRX1P54821 245 aa12.65□□□□□ -0.38
MUC1-220ENST00000498431 MTCP1P56278 107 aa12.65□□□□□ -0.38
MUC1-220ENST00000498431 RAB25P57735 213 aa12.65□□□□□ -0.38
MUC1-220ENST00000498431 ADARB1P78563 741 aaKnown RBP12.65□□□□□ -0.38
MUC1-220ENST00000498431 PDZK1IP1Q13113 114 aa12.65□□□□□ -0.38
MUC1-220ENST00000498431 HNF4GQ14541 408 aa12.65□□□□□ -0.38
MUC1-220ENST00000498431 DEFB136Q30KP8 78 aa12.65□□□□□ -0.38
MUC1-220ENST00000498431 LCNL1Q6ZST4 164 aa12.65□□□□□ -0.38
MUC1-220ENST00000498431 THNSL2Q86YJ6 484 aa12.65□□□□□ -0.38
MUC1-220ENST00000498431 ZNF695Q8IW36 515 aa12.65□□□□□ -0.38
MUC1-220ENST00000498431 DRAM1Q8N682 238 aa12.65□□□□□ -0.38
MUC1-220ENST00000498431 DNAAF1Q8NEP3 725 aa12.65□□□□□ -0.38
MUC1-220ENST00000498431 OR4D6Q8NGJ1 314 aa12.65□□□□□ -0.38
MUC1-220ENST00000498431 TMEM163Q8TC26 289 aa12.65□□□□□ -0.38
MUC1-220ENST00000498431 LEAP2Q969E1 77 aa12.65□□□□□ -0.38
MUC1-220ENST00000498431 TOMM40LQ969M1 308 aa12.65□□□□□ -0.38
MUC1-220ENST00000498431 RNF166Q96A37 237 aaPredicted RBP12.65□□□□□ -0.38
MUC1-220ENST00000498431 ADI1Q9BV57 179 aa12.65□□□□□ -0.38
MUC1-220ENST00000498431 H2AFY2Q9P0M6 372 aaPredicted RBP12.65□□□□□ -0.38
MUC1-220ENST00000498431 LYSTQ99698 3801 aa12.65□□□□□ -0.38
MUC1-220ENST00000498431 METTL15A6NJ78 407 aa12.64□□□□□ -0.39
MUC1-220ENST00000498431 C3orf84H3BNL1 204 aa12.64□□□□□ -0.39
MUC1-220ENST00000498431 CCL24O00175 119 aa12.64□□□□□ -0.39
MUC1-220ENST00000498431 CYB5AP00167 134 aa12.64□□□□□ -0.39
MUC1-220ENST00000498431 SLC6A1P30531 599 aa12.64□□□□□ -0.39
MUC1-220ENST00000498431 CAPGP40121 348 aa12.64□□□□□ -0.39
MUC1-220ENST00000498431 HSPA13P48723 471 aa12.64□□□□□ -0.39
MUC1-220ENST00000498431 AQP4P55087 323 aa12.64□□□□□ -0.39
MUC1-220ENST00000498431 SCN1BQ07699 218 aa12.64□□□□□ -0.39
MUC1-220ENST00000498431 ATXN7L3Q14CW9 347 aaPredicted RBP12.64□□□□□ -0.39
MUC1-220ENST00000498431 KRBOX4Q5JUW0 171 aa12.64□□□□□ -0.39
MUC1-220ENST00000498431 Q6P435 159 aa12.64□□□□□ -0.39
MUC1-220ENST00000498431 IZUMO2Q6UXV1 221 aa12.64□□□□□ -0.39
MUC1-220ENST00000498431 OR8J1Q8NGP2 316 aa12.64□□□□□ -0.39
MUC1-220ENST00000498431 TRUB1Q8WWH5 349 aaKnown RBP12.64□□□□□ -0.39
MUC1-220ENST00000498431 PP6455Q8WZ26 134 aa12.64□□□□□ -0.39
MUC1-220ENST00000498431 RPEQ96AT9 228 aa12.64□□□□□ -0.39
MUC1-220ENST00000498431 KIRREL1Q96J84 757 aa12.64□□□□□ -0.39
MUC1-220ENST00000498431 SPACA5Q96QH8 159 aa12.64□□□□□ -0.39
MUC1-220ENST00000498431 COMMD4Q9H0A8 199 aa12.64□□□□□ -0.39
MUC1-220ENST00000498431 BIRC6Q9NR09 4857 aa12.63□□□□□ -0.39
MUC1-220ENST00000498431 FUOMA2VDF0 154 aa12.63□□□□□ -0.39
MUC1-220ENST00000498431 ZNF729A6NN14 1252 aaPredicted RBP12.63□□□□□ -0.39
MUC1-220ENST00000498431 SLC33A1O00400 549 aaPredicted RBP12.63□□□□□ -0.39
MUC1-220ENST00000498431 MPZL2O60487 215 aa12.63□□□□□ -0.39
MUC1-220ENST00000498431 RAMP3O60896 148 aa12.63□□□□□ -0.39
MUC1-220ENST00000498431 IGHG2P01859 326 aa12.63□□□□□ -0.39
MUC1-220ENST00000498431 CSN2P05814 226 aa12.63□□□□□ -0.39
MUC1-220ENST00000498431 CGB3P0DN86 165 aa12.63□□□□□ -0.39
MUC1-220ENST00000498431 CGB7P0DN87 165 aa12.63□□□□□ -0.39
MUC1-220ENST00000498431 ZNF44P15621 663 aa12.63□□□□□ -0.39
MUC1-220ENST00000498431 TMEM11P17152 192 aa12.63□□□□□ -0.39
MUC1-220ENST00000498431 ATF1P18846 271 aa12.63□□□□□ -0.39
MUC1-220ENST00000498431 HES1Q14469 280 aa12.63□□□□□ -0.39
MUC1-220ENST00000498431 SLC35E3Q7Z769 313 aa12.63□□□□□ -0.39
MUC1-220ENST00000498431 STPG2Q8N412 459 aa12.63□□□□□ -0.39
MUC1-220ENST00000498431 CCDC54Q8NEL0 328 aa12.63□□□□□ -0.39
MUC1-220ENST00000498431 OR5D18Q8NGL1 313 aa12.63□□□□□ -0.39
MUC1-220ENST00000498431 OR9G1Q8NH87 305 aa12.63□□□□□ -0.39
MUC1-220ENST00000498431 C10orf35Q96D05 121 aa12.63□□□□□ -0.39
MUC1-220ENST00000498431 ZMAT5Q9UDW3 170 aaKnown RBP12.63□□□□□ -0.39
MUC1-220ENST00000498431 KBTBD11-OT1A0A1B0GTJ5 212 aa12.62□□□□□ -0.39
MUC1-220ENST00000498431 J3QR06 171 aa12.62□□□□□ -0.39
MUC1-220ENST00000498431 KDM4BO94953 1096 aa12.62□□□□□ -0.39
MUC1-220ENST00000498431 RPLP1P05386 114 aaKnown RBP12.62□□□□□ -0.39
MUC1-220ENST00000498431 SNRPGP62308 76 aaKnown RBP12.62□□□□□ -0.39
MUC1-220ENST00000498431 ZNF691Q5VV52 312 aa12.62□□□□□ -0.39
MUC1-220ENST00000498431 LHFPL2Q6ZUX7 228 aa12.62□□□□□ -0.39
MUC1-220ENST00000498431 GID4Q8IVV7 300 aa12.62□□□□□ -0.39
MUC1-220ENST00000498431 SETD9Q8NE22 299 aa12.62□□□□□ -0.39
MUC1-220ENST00000498431 FGGYQ96C11 551 aa12.62□□□□□ -0.39
MUC1-220ENST00000498431 GAR1Q9NY12 217 aaKnown RBP12.62□□□□□ -0.39
MUC1-220ENST00000498431 DNAH1Q9P2D7 4330 aa12.61□□□□□ -0.39
MUC1-220ENST00000498431 FGF16O43320 207 aa12.61□□□□□ -0.39
MUC1-220ENST00000498431 SULT1C4O75897 302 aa12.61□□□□□ -0.39
MUC1-220ENST00000498431 ZFPL1O95159 310 aa12.61□□□□□ -0.39
MUC1-220ENST00000498431 IGKV1D-33P01593 117 aa12.61□□□□□ -0.39
MUC1-220ENST00000498431 IGKV1-33P01594 117 aa12.61□□□□□ -0.39
MUC1-220ENST00000498431 OR2T7P0C7T2 308 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 144.6 ms