RNA–Protein interactions for RNA: ENST00000498284.1

PTPRK-215, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 524 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-215ENST00000498284 SPOPO43791 374 aa2.29□□□□□ -2.04
PTPRK-215ENST00000498284 ALOX12BO75342 701 aa2.29□□□□□ -2.04
PTPRK-215ENST00000498284 S100A9P06702 114 aaKnown RBP2.29□□□□□ -2.04
PTPRK-215ENST00000498284 OR5AL1P0C617 328 aa2.29□□□□□ -2.04
PTPRK-215ENST00000498284 CCDC172P0C7W6 258 aa2.29□□□□□ -2.04
PTPRK-215ENST00000498284 NELFEP18615 380 aaKnown RBP2.29□□□□□ -2.04
PTPRK-215ENST00000498284 IDH2P48735 452 aaKnown RBP2.29□□□□□ -2.04
PTPRK-215ENST00000498284 RBX1P62877 108 aa2.29□□□□□ -2.04
PTPRK-215ENST00000498284 IL5RAQ01344 420 aa2.29□□□□□ -2.04
PTPRK-215ENST00000498284 MAD2L1BPQ15013 274 aaPredicted RBP2.29□□□□□ -2.04
PTPRK-215ENST00000498284 PMVKQ15126 192 aa2.29□□□□□ -2.04
PTPRK-215ENST00000498284 TAL2Q16559 108 aa2.29□□□□□ -2.04
PTPRK-215ENST00000498284 TTC32Q5I0X7 151 aa2.29□□□□□ -2.04
PTPRK-215ENST00000498284 SPINT4Q6UDR6 99 aa2.29□□□□□ -2.04
PTPRK-215ENST00000498284 SPERTQ8NA61 448 aa2.29□□□□□ -2.04
PTPRK-215ENST00000498284 ZNF420Q8TAQ5 688 aaPredicted RBP2.29□□□□□ -2.04
PTPRK-215ENST00000498284 PHF10Q8WUB8 498 aaKnown RBP2.29□□□□□ -2.04
PTPRK-215ENST00000498284 OPTNQ96CV9 577 aa2.29□□□□□ -2.04
PTPRK-215ENST00000498284 YIPF6Q96EC8 236 aa2.29□□□□□ -2.04
PTPRK-215ENST00000498284 COA1Q9GZY4 146 aa2.29□□□□□ -2.04
PTPRK-215ENST00000498284 DHX35Q9H5Z1 703 aaKnown RBP2.29□□□□□ -2.04
PTPRK-215ENST00000498284 XKR8Q9H6D3 395 aa2.29□□□□□ -2.04
PTPRK-215ENST00000498284 C11orf49Q9H6J7 331 aa2.29□□□□□ -2.04
PTPRK-215ENST00000498284 LINC00574Q9H8X3 128 aa2.29□□□□□ -2.04
PTPRK-215ENST00000498284 VCX3AQ9NNX9 186 aa2.29□□□□□ -2.04
PTPRK-215ENST00000498284 CA10Q9NS85 328 aa2.29□□□□□ -2.04
PTPRK-215ENST00000498284 DHCR7Q9UBM7 475 aaKnown RBP2.29□□□□□ -2.04
PTPRK-215ENST00000498284 STK38LQ9Y2H1 464 aa2.29□□□□□ -2.04
PTPRK-215ENST00000498284 NOSIPQ9Y314 301 aaKnown RBP2.29□□□□□ -2.04
PTPRK-215ENST00000498284 FAM208BQ5VWN6 2430 aa2.29□□□□□ -2.04
PTPRK-215ENST00000498284 SPEF2Q9C093 1822 aa2.28□□□□□ -2.04
PTPRK-215ENST00000498284 ZFHX2Q9C0A1 2572 aaPredicted RBP2.28□□□□□ -2.04
PTPRK-215ENST00000498284 FASNP49327 2511 aaKnown RBP2.28□□□□□ -2.04
PTPRK-215ENST00000498284 VPS13AQ96RL7 3174 aa2.28□□□□□ -2.04
PTPRK-215ENST00000498284 IGHV3OR16-8A0A075B7F1 116 aa2.28□□□□□ -2.04
PTPRK-215ENST00000498284 IGKV1-6A0A0C4DH72 117 aa2.28□□□□□ -2.04
PTPRK-215ENST00000498284 TMEM72A0PK05 275 aa2.28□□□□□ -2.04
PTPRK-215ENST00000498284 IGKV1-39P01597 117 aa2.28□□□□□ -2.04
PTPRK-215ENST00000498284 IGKV1D-39P04432 117 aa2.28□□□□□ -2.04
PTPRK-215ENST00000498284 LIPCP11150 499 aa2.28□□□□□ -2.04
PTPRK-215ENST00000498284 HLA-GP17693 338 aa2.28□□□□□ -2.04
PTPRK-215ENST00000498284 MPIP34949 423 aa2.28□□□□□ -2.04
PTPRK-215ENST00000498284 TGFBR1P36897 503 aa2.28□□□□□ -2.04
PTPRK-215ENST00000498284 RGS6P49758 472 aa2.28□□□□□ -2.04
PTPRK-215ENST00000498284 ATP5J2P56134 94 aa2.28□□□□□ -2.04
PTPRK-215ENST00000498284 RPL10AP62906 217 aaKnown RBP2.28□□□□□ -2.04
PTPRK-215ENST00000498284 CDNFQ49AH0 187 aa2.28□□□□□ -2.04
PTPRK-215ENST00000498284 SGPP2Q8IWX5 399 aa2.28□□□□□ -2.04
PTPRK-215ENST00000498284 OR2M7Q8NG81 312 aa2.28□□□□□ -2.04
PTPRK-215ENST00000498284 OR6N2Q8NGY6 317 aa2.28□□□□□ -2.04
PTPRK-215ENST00000498284 OR52N1Q8NH53 320 aa2.28□□□□□ -2.04
PTPRK-215ENST00000498284 NT5CQ8TCD5 201 aa2.28□□□□□ -2.04
PTPRK-215ENST00000498284 KLF14Q8TD94 323 aaPredicted RBP2.28□□□□□ -2.04
PTPRK-215ENST00000498284 TMED9Q9BVK6 235 aa2.28□□□□□ -2.04
PTPRK-215ENST00000498284 MAP1LC3CQ9BXW4 147 aa2.28□□□□□ -2.04
PTPRK-215ENST00000498284 MRPL20Q9BYC9 149 aaKnown RBP2.28□□□□□ -2.04
PTPRK-215ENST00000498284 PORCNQ9H237 461 aa2.28□□□□□ -2.04
PTPRK-215ENST00000498284 IL37Q9NZH6 218 aa2.28□□□□□ -2.04
PTPRK-215ENST00000498284 SLC7A11Q9UPY5 501 aa2.28□□□□□ -2.04
PTPRK-215ENST00000498284 PTPRFP10586 1907 aa2.28□□□□□ -2.04
PTPRK-215ENST00000498284 MYH3P11055 1940 aa2.28□□□□□ -2.04
PTPRK-215ENST00000498284 PLXNA1Q9UIW2 1896 aa2.28□□□□□ -2.04
PTPRK-215ENST00000498284 DMXL1Q9Y485 3027 aa2.28□□□□□ -2.05
PTPRK-215ENST00000498284 SETXQ7Z333 2677 aaKnown RBP2.27□□□□□ -2.05
PTPRK-215ENST00000498284 NCOR2Q9Y618 2525 aa2.27□□□□□ -2.05
PTPRK-215ENST00000498284 GVINP1Q7Z2Y8 2422 aa2.27□□□□□ -2.05
PTPRK-215ENST00000498284 GBF1Q92538 1859 aa2.27□□□□□ -2.05
PTPRK-215ENST00000498284 GSTTP1A0A1W2PQM5 241 aa2.27□□□□□ -2.05
PTPRK-215ENST00000498284 C16orf90A8MZG2 172 aa2.27□□□□□ -2.05
PTPRK-215ENST00000498284 K7EN84 100 aa2.27□□□□□ -2.05
PTPRK-215ENST00000498284 PRMT5O14744 637 aaPredicted RBP2.27□□□□□ -2.05
PTPRK-215ENST00000498284 GATCO43716 136 aaKnown RBP2.27□□□□□ -2.05
PTPRK-215ENST00000498284 ENSAO43768 121 aaKnown RBP2.27□□□□□ -2.05
PTPRK-215ENST00000498284 DHRS3O75911 302 aa2.27□□□□□ -2.05
PTPRK-215ENST00000498284 LCN1P31025 176 aa2.27□□□□□ -2.05
PTPRK-215ENST00000498284 DYNC1I2Q13409 638 aaKnown RBP2.27□□□□□ -2.05
PTPRK-215ENST00000498284 SP6Q3SY56 376 aa2.27□□□□□ -2.05
PTPRK-215ENST00000498284 FBXL19-AS1Q494R0 122 aa2.27□□□□□ -2.05
PTPRK-215ENST00000498284 PID1Q7Z2X4 250 aa2.27□□□□□ -2.05
PTPRK-215ENST00000498284 ITPRIPQ8IWB1 547 aa2.27□□□□□ -2.05
PTPRK-215ENST00000498284 CA13Q8N1Q1 262 aa2.27□□□□□ -2.05
PTPRK-215ENST00000498284 RNF10Q8N5U6 811 aaKnown RBP2.27□□□□□ -2.05
PTPRK-215ENST00000498284 OR1P1Q8NH06 330 aa2.27□□□□□ -2.05
PTPRK-215ENST00000498284 OR8K3Q8NH51 312 aa2.27□□□□□ -2.05
PTPRK-215ENST00000498284 ORAOV1Q8WV07 137 aa2.27□□□□□ -2.05
PTPRK-215ENST00000498284 CACNG8Q8WXS5 425 aa2.27□□□□□ -2.05
PTPRK-215ENST00000498284 LRRC39Q96DD0 335 aa2.27□□□□□ -2.05
PTPRK-215ENST00000498284 C19orf60Q96EN9 201 aa2.27□□□□□ -2.05
PTPRK-215ENST00000498284 DERL3Q96Q80 235 aa2.27□□□□□ -2.05
PTPRK-215ENST00000498284 METTL26Q96S19 204 aa2.27□□□□□ -2.05
PTPRK-215ENST00000498284 BBS2Q9BXC9 721 aa2.27□□□□□ -2.05
PTPRK-215ENST00000498284 MS4A8Q9BY19 250 aa2.27□□□□□ -2.05
PTPRK-215ENST00000498284 SLC38A1Q9H2H9 487 aa2.27□□□□□ -2.05
PTPRK-215ENST00000498284 HAUS4Q9H6D7 363 aa2.27□□□□□ -2.05
PTPRK-215ENST00000498284 NRBP2Q9NSY0 501 aa2.27□□□□□ -2.05
PTPRK-215ENST00000498284 PRO0628Q9UI54 55 aa2.27□□□□□ -2.05
PTPRK-215ENST00000498284 PRRC2BQ5JSZ5 2229 aaKnown RBP2.27□□□□□ -2.05
PTPRK-215ENST00000498284 MYO15AQ9UKN7 3530 aa2.27□□□□□ -2.05
PTPRK-215ENST00000498284 MAP1BP46821 2468 aaKnown RBP2.27□□□□□ -2.05
PTPRK-215ENST00000498284 ZFHX4Q86UP3 3567 aa2.26□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms