RNA–Protein interactions for RNA: ENST00000497892.5

ERCC8-208, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 1 (best)

Gene ERCC8, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-208ENST00000497892 A0A1W2PRV1 198 aa9.19□□□□□ -0.94
ERCC8-208ENST00000497892 DNAJC9-AS1A6NH13 148 aa9.19□□□□□ -0.94
ERCC8-208ENST00000497892 RNF212BA8MTL3 300 aa9.19□□□□□ -0.94
ERCC8-208ENST00000497892 C17orf98A8MV24 154 aa9.19□□□□□ -0.94
ERCC8-208ENST00000497892 ARL6IP5O75915 188 aa9.19□□□□□ -0.94
ERCC8-208ENST00000497892 ZNF728P0DKX0 622 aa9.19□□□□□ -0.94
ERCC8-208ENST00000497892 CD37P11049 281 aa9.19□□□□□ -0.94
ERCC8-208ENST00000497892 GTF2F2P13984 249 aa9.19□□□□□ -0.94
ERCC8-208ENST00000497892 PRB3Q04118 309 aaPredicted RBP9.19□□□□□ -0.94
ERCC8-208ENST00000497892 KLRD1Q13241 179 aa9.19□□□□□ -0.94
ERCC8-208ENST00000497892 DEFB112Q30KQ8 113 aa9.19□□□□□ -0.94
ERCC8-208ENST00000497892 PAN3Q58A45 887 aaKnown RBP9.19□□□□□ -0.94
ERCC8-208ENST00000497892 AWAT2Q6E213 333 aa9.19□□□□□ -0.94
ERCC8-208ENST00000497892 HCP5Q6MZN7 132 aa9.19□□□□□ -0.94
ERCC8-208ENST00000497892 CD200R1LQ6Q8B3 271 aa9.19□□□□□ -0.94
ERCC8-208ENST00000497892 GLIPR1L1Q6UWM5 242 aa9.19□□□□□ -0.94
ERCC8-208ENST00000497892 LINC00596Q86U02 117 aa9.19□□□□□ -0.94
ERCC8-208ENST00000497892 PDZD9Q8IXQ8 264 aa9.19□□□□□ -0.94
ERCC8-208ENST00000497892 ZDHHC22Q8N966 263 aa9.19□□□□□ -0.94
ERCC8-208ENST00000497892 MRPS24Q96EL2 167 aaKnown RBP9.19□□□□□ -0.94
ERCC8-208ENST00000497892 COQ2Q96H96 371 aa9.19□□□□□ -0.94
ERCC8-208ENST00000497892 ZNF714Q96N38 554 aa9.19□□□□□ -0.94
ERCC8-208ENST00000497892 SLITRK2Q9H156 845 aa9.19□□□□□ -0.94
ERCC8-208ENST00000497892 PCDHB16Q9NRJ7 776 aa9.19□□□□□ -0.94
ERCC8-208ENST00000497892 A0A0U1RQK1 487 aa9.18□□□□□ -0.94
ERCC8-208ENST00000497892 ODAMA1E959 279 aa9.18□□□□□ -0.94
ERCC8-208ENST00000497892 MEX3AA1L020 520 aaKnown RBP9.18□□□□□ -0.94
ERCC8-208ENST00000497892 FUOMA2VDF0 154 aa9.18□□□□□ -0.94
ERCC8-208ENST00000497892 CLDN34H7C241 214 aa9.18□□□□□ -0.94
ERCC8-208ENST00000497892 HSPB6O14558 160 aa9.18□□□□□ -0.94
ERCC8-208ENST00000497892 GEMIN2O14893 280 aaKnown RBP9.18□□□□□ -0.94
ERCC8-208ENST00000497892 NPFFO15130 113 aa9.18□□□□□ -0.94
ERCC8-208ENST00000497892 OR7C1O76099 320 aaPredicted RBP9.18□□□□□ -0.94
ERCC8-208ENST00000497892 UBE2E1P51965 193 aa9.18□□□□□ -0.94
ERCC8-208ENST00000497892 ERVFRD-1P60508 538 aa9.18□□□□□ -0.94
ERCC8-208ENST00000497892 PAX5Q02548 391 aa9.18□□□□□ -0.94
ERCC8-208ENST00000497892 AESQ08117 197 aa9.18□□□□□ -0.94
ERCC8-208ENST00000497892 ATXN7L3Q14CW9 347 aaPredicted RBP9.18□□□□□ -0.94
ERCC8-208ENST00000497892 MPV17LQ2QL34 196 aa9.18□□□□□ -0.94
ERCC8-208ENST00000497892 C1orf100Q5SVJ3 147 aa9.18□□□□□ -0.94
ERCC8-208ENST00000497892 GLT8D1Q68CQ7 371 aa9.18□□□□□ -0.94
ERCC8-208ENST00000497892 FOXRED1Q96CU9 486 aaPredicted RBP9.18□□□□□ -0.94
ERCC8-208ENST00000497892 KRTAP9-2Q9BYQ4 174 aa9.18□□□□□ -0.94
ERCC8-208ENST00000497892 ZMAT3Q9HA38 289 aaKnown RBP9.18□□□□□ -0.94
ERCC8-208ENST00000497892 ZNF581Q9P0T4 197 aa9.18□□□□□ -0.94
ERCC8-208ENST00000497892 GHRLQ9UBU3 117 aa9.18□□□□□ -0.94
ERCC8-208ENST00000497892 UBE2J1Q9Y385 318 aaPredicted RBP9.18□□□□□ -0.94
ERCC8-208ENST00000497892 TRGV10A0A0A0MS01 117 aa9.17□□□□□ -0.94
ERCC8-208ENST00000497892 TRIM77I1YAP6 450 aa9.17□□□□□ -0.94
ERCC8-208ENST00000497892 CCRL2O00421 344 aa9.17□□□□□ -0.94
ERCC8-208ENST00000497892 SLC22A1O15245 554 aa9.17□□□□□ -0.94
ERCC8-208ENST00000497892 CLPXO76031 633 aa9.17□□□□□ -0.94
ERCC8-208ENST00000497892 UBBP0CG47 229 aa9.17□□□□□ -0.94
ERCC8-208ENST00000497892 IGHV1-8P0DP01 117 aa9.17□□□□□ -0.94
ERCC8-208ENST00000497892 MGMTP16455 207 aa9.17□□□□□ -0.94
ERCC8-208ENST00000497892 GALP22466 123 aa9.17□□□□□ -0.94
ERCC8-208ENST00000497892 CALRP27797 417 aaKnown RBP9.17□□□□□ -0.94
ERCC8-208ENST00000497892 PSMB9P28065 219 aa9.17□□□□□ -0.94
ERCC8-208ENST00000497892 SAA4P35542 130 aa9.17□□□□□ -0.94
ERCC8-208ENST00000497892 GLIPR1P48060 266 aa9.17□□□□□ -0.94
ERCC8-208ENST00000497892 KCNJ3P48549 501 aa9.17□□□□□ -0.94
ERCC8-208ENST00000497892 UBA52P62987 128 aaKnown RBP9.17□□□□□ -0.94
ERCC8-208ENST00000497892 BAMBIQ13145 260 aa9.17□□□□□ -0.94
ERCC8-208ENST00000497892 KRBOX4Q5JUW0 171 aa9.17□□□□□ -0.94
ERCC8-208ENST00000497892 ZNF782Q6ZMW2 699 aaPredicted RBP9.17□□□□□ -0.94
ERCC8-208ENST00000497892 TRAPPC6BQ86SZ2 158 aa9.17□□□□□ -0.94
ERCC8-208ENST00000497892 PNKDQ8N490 385 aa9.17□□□□□ -0.94
ERCC8-208ENST00000497892 TMEM104Q8NE00 496 aa9.17□□□□□ -0.94
ERCC8-208ENST00000497892 OR6M1Q8NGM8 313 aa9.17□□□□□ -0.94
ERCC8-208ENST00000497892 GFI1Q99684 422 aa9.17□□□□□ -0.94
ERCC8-208ENST00000497892 DPCDQ9BVM2 203 aaPredicted RBP9.17□□□□□ -0.94
ERCC8-208ENST00000497892 C19orf24Q9BVV8 132 aa9.17□□□□□ -0.94
ERCC8-208ENST00000497892 CST11Q9H112 138 aa9.17□□□□□ -0.94
ERCC8-208ENST00000497892 GAL3ST2Q9H3Q3 398 aa9.17□□□□□ -0.94
ERCC8-208ENST00000497892 HEXA-AS1Q9H8Q6 139 aa9.17□□□□□ -0.94
ERCC8-208ENST00000497892 RCC2Q9P258 522 aaKnown RBP9.17□□□□□ -0.94
ERCC8-208ENST00000497892 KIAA2026Q5HYC2 2103 aa9.17□□□□□ -0.94
ERCC8-208ENST00000497892 TRDV1A0A1B0GX56 115 aa9.16□□□□□ -0.94
ERCC8-208ENST00000497892 FAM90A10PA6NDY2 464 aa9.16□□□□□ -0.94
ERCC8-208ENST00000497892 FAM90A18PA6NE21 464 aa9.16□□□□□ -0.94
ERCC8-208ENST00000497892 FAM90A16PA6NEW6 464 aa9.16□□□□□ -0.94
ERCC8-208ENST00000497892 FAM90A20PA6NIJ5 464 aa9.16□□□□□ -0.94
ERCC8-208ENST00000497892 FAM90A8PA6NJQ4 464 aa9.16□□□□□ -0.94
ERCC8-208ENST00000497892 FAM90A7PA6NKC0 464 aa9.16□□□□□ -0.94
ERCC8-208ENST00000497892 FAM90A22PA8MWA6 464 aa9.16□□□□□ -0.94
ERCC8-208ENST00000497892 FAM90A12PA8MX19 464 aa9.16□□□□□ -0.94
ERCC8-208ENST00000497892 FAM90A5PA8MXJ8 464 aa9.16□□□□□ -0.94
ERCC8-208ENST00000497892 FAM90A23PA8MXZ1 464 aa9.16□□□□□ -0.94
ERCC8-208ENST00000497892 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.16□□□□□ -0.94
ERCC8-208ENST00000497892 HOXA3O43365 443 aaPredicted RBP9.16□□□□□ -0.94
ERCC8-208ENST00000497892 CRTAPO75718 401 aaPredicted RBP9.16□□□□□ -0.94
ERCC8-208ENST00000497892 RNASE1P07998 156 aaKnown RBP9.16□□□□□ -0.94
ERCC8-208ENST00000497892 MELTFP08582 738 aa9.16□□□□□ -0.94
ERCC8-208ENST00000497892 FBP1P09467 338 aa9.16□□□□□ -0.94
ERCC8-208ENST00000497892 FAM90A15PP0C7V4 464 aa9.16□□□□□ -0.94
ERCC8-208ENST00000497892 FAM90A13PP0C7W8 464 aa9.16□□□□□ -0.94
ERCC8-208ENST00000497892 FAM90A14PP0C7W9 464 aa9.16□□□□□ -0.94
ERCC8-208ENST00000497892 FAM90A24PP0C7X0 464 aa9.16□□□□□ -0.94
ERCC8-208ENST00000497892 HTR2CP28335 458 aa9.16□□□□□ -0.94
ERCC8-208ENST00000497892 SLC9A3R2Q15599 337 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms