RNA–Protein interactions for RNA: ENST00000496946.1

SNRNP48-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 2,610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-202ENST00000496946 GPR84Q9NQS5 396 aa2.65□□□□□ -1.99
SNRNP48-202ENST00000496946 EXOSC3Q9NQT5 275 aaKnown RBP2.65□□□□□ -1.99
SNRNP48-202ENST00000496946 CISHQ9NSE2 258 aa2.65□□□□□ -1.99
SNRNP48-202ENST00000496946 MARCH5Q9NX47 278 aa2.65□□□□□ -1.99
SNRNP48-202ENST00000496946 TAS2R8Q9NYW2 309 aa2.65□□□□□ -1.99
SNRNP48-202ENST00000496946 LHX3Q9UBR4 397 aa2.65□□□□□ -1.99
SNRNP48-202ENST00000496946 POLDIP2Q9Y2S7 368 aa2.65□□□□□ -1.99
SNRNP48-202ENST00000496946 ZCCHC11Q5TAX3 1644 aaKnown RBP2.64□□□□□ -1.99
SNRNP48-202ENST00000496946 AGLP35573 1532 aa2.64□□□□□ -1.99
SNRNP48-202ENST00000496946 A0A0A6YYD5 115 aa2.64□□□□□ -1.99
SNRNP48-202ENST00000496946 IGHV1-69-2A0A0G2JMI3 117 aa2.64□□□□□ -1.99
SNRNP48-202ENST00000496946 ZNF816-ZNF321PA0A0X1KG74 233 aa2.64□□□□□ -1.99
SNRNP48-202ENST00000496946 A0A1B0GX51 115 aa2.64□□□□□ -1.99
SNRNP48-202ENST00000496946 G3V3Q6 166 aa2.64□□□□□ -1.99
SNRNP48-202ENST00000496946 SMIM22K7EJ46 135 aa2.64□□□□□ -1.99
SNRNP48-202ENST00000496946 K7EPK0 472 aa2.64□□□□□ -1.99
SNRNP48-202ENST00000496946 SIRPB1O00241 398 aa2.64□□□□□ -1.99
SNRNP48-202ENST00000496946 PLPP1O14494 284 aa2.64□□□□□ -1.99
SNRNP48-202ENST00000496946 TYROBPO43914 113 aa2.64□□□□□ -1.99
SNRNP48-202ENST00000496946 EIF4E2O60573 245 aaKnown RBP2.64□□□□□ -1.99
SNRNP48-202ENST00000496946 LDB3O75112 727 aa2.64□□□□□ -1.99
SNRNP48-202ENST00000496946 C1QL1O75973 258 aa2.64□□□□□ -1.99
SNRNP48-202ENST00000496946 SOX14O95416 240 aa2.64□□□□□ -1.99
SNRNP48-202ENST00000496946 MMP7P09237 267 aaPredicted RBP2.64□□□□□ -1.99
SNRNP48-202ENST00000496946 DANCRP0C864 163 aa2.64□□□□□ -1.99
SNRNP48-202ENST00000496946 MGMTP16455 207 aa2.64□□□□□ -1.99
SNRNP48-202ENST00000496946 ZNF37AP17032 561 aaPredicted RBP2.64□□□□□ -1.99
SNRNP48-202ENST00000496946 EVI2AP22794 236 aa2.64□□□□□ -1.99
SNRNP48-202ENST00000496946 PRDX3P30048 256 aaKnown RBP2.64□□□□□ -1.99
SNRNP48-202ENST00000496946 GABRA3P34903 492 aa2.64□□□□□ -1.99
SNRNP48-202ENST00000496946 RPA3P35244 121 aaPredicted RBP2.64□□□□□ -1.99
SNRNP48-202ENST00000496946 SNCAP37840 140 aa2.64□□□□□ -1.99
SNRNP48-202ENST00000496946 AVPR1BP47901 424 aa2.64□□□□□ -1.99
SNRNP48-202ENST00000496946 INPP1P49441 399 aa2.64□□□□□ -1.99
SNRNP48-202ENST00000496946 PDX1P52945 283 aa2.64□□□□□ -1.99
SNRNP48-202ENST00000496946 SLC35B1P78383 322 aa2.64□□□□□ -1.99
SNRNP48-202ENST00000496946 OC90Q02509 493 aaPredicted RBP2.64□□□□□ -1.99
SNRNP48-202ENST00000496946 AKR1C1Q04828 323 aa2.64□□□□□ -1.99
SNRNP48-202ENST00000496946 ST3GAL1Q11201 340 aa2.64□□□□□ -1.99
SNRNP48-202ENST00000496946 SIX1Q15475 284 aaPredicted RBP2.64□□□□□ -1.99
SNRNP48-202ENST00000496946 ITSN1Q15811 1721 aa2.64□□□□□ -1.99
SNRNP48-202ENST00000496946 ZNF79Q15937 498 aa2.64□□□□□ -1.99
SNRNP48-202ENST00000496946 COL24A1Q17RW2 1714 aa2.64□□□□□ -1.99
SNRNP48-202ENST00000496946 TIMM50Q3ZCQ8 353 aa2.64□□□□□ -1.99
SNRNP48-202ENST00000496946 LRRC10Q5BKY1 277 aa2.64□□□□□ -1.99
SNRNP48-202ENST00000496946 LYPLAL1Q5VWZ2 237 aa2.64□□□□□ -1.99
SNRNP48-202ENST00000496946 FAM166AQ6J272 317 aa2.64□□□□□ -1.99
SNRNP48-202ENST00000496946 SHC4Q6S5L8 630 aa2.64□□□□□ -1.99
SNRNP48-202ENST00000496946 DHRS13Q6UX07 377 aa2.64□□□□□ -1.99
SNRNP48-202ENST00000496946 Q6ZT83 130 aa2.64□□□□□ -1.99
SNRNP48-202ENST00000496946 SLC39A11Q8N1S5 342 aa2.64□□□□□ -1.99
SNRNP48-202ENST00000496946 FAM71E2Q8N5Q1 922 aa2.64□□□□□ -1.99
SNRNP48-202ENST00000496946 RELL2Q8NC24 303 aaPredicted RBP2.64□□□□□ -1.99
SNRNP48-202ENST00000496946 MDS2Q8NDY4 140 aa2.64□□□□□ -1.99
SNRNP48-202ENST00000496946 OR2T12Q8NG77 320 aa2.64□□□□□ -1.99
SNRNP48-202ENST00000496946 OR1F12Q8NHA8 337 aa2.64□□□□□ -1.99
SNRNP48-202ENST00000496946 PSMF1Q92530 271 aa2.64□□□□□ -1.99
SNRNP48-202ENST00000496946 SARAFQ96BY9 339 aa2.64□□□□□ -1.99
SNRNP48-202ENST00000496946 RAB39BQ96DA2 213 aa2.64□□□□□ -1.99
SNRNP48-202ENST00000496946 ADTRPQ96IZ2 230 aa2.64□□□□□ -1.99
SNRNP48-202ENST00000496946 SLC25A33Q9BSK2 321 aa2.64□□□□□ -1.99
SNRNP48-202ENST00000496946 OR2D2Q9H210 308 aa2.64□□□□□ -1.99
SNRNP48-202ENST00000496946 CDCP1Q9H5V8 836 aa2.64□□□□□ -1.99
SNRNP48-202ENST00000496946 FKBP11Q9NYL4 201 aa2.64□□□□□ -1.99
SNRNP48-202ENST00000496946 IDI2-AS1Q9NZ38 188 aa2.64□□□□□ -1.99
SNRNP48-202ENST00000496946 RPS6KB2Q9UBS0 482 aa2.64□□□□□ -1.99
SNRNP48-202ENST00000496946 UQCR10Q9UDW1 63 aa2.64□□□□□ -1.99
SNRNP48-202ENST00000496946 TCF19Q9Y242 345 aa2.64□□□□□ -1.99
SNRNP48-202ENST00000496946 TPRKBQ9Y3C4 175 aa2.64□□□□□ -1.99
SNRNP48-202ENST00000496946 WIPI2Q9Y4P8 454 aa2.64□□□□□ -1.99
SNRNP48-202ENST00000496946 USP32Q8NFA0 1604 aa2.64□□□□□ -1.99
SNRNP48-202ENST00000496946 SLIT3O75094 1523 aa2.64□□□□□ -1.99
SNRNP48-202ENST00000496946 MEGF6O75095 1541 aa2.64□□□□□ -1.99
SNRNP48-202ENST00000496946 TRAV19A0A0A6YYK7 116 aa2.64□□□□□ -1.99
SNRNP48-202ENST00000496946 A0A1W2PS29 197 aa2.64□□□□□ -1.99
SNRNP48-202ENST00000496946 TCRBV3S1A0A5B6 114 aa2.64□□□□□ -1.99
SNRNP48-202ENST00000496946 BTNL10A8MVZ5 291 aa2.64□□□□□ -1.99
SNRNP48-202ENST00000496946 MFNGO00587 321 aa2.64□□□□□ -1.99
SNRNP48-202ENST00000496946 TRAPPC6AO75865 159 aa2.64□□□□□ -1.99
SNRNP48-202ENST00000496946 MOSP00540 346 aa2.64□□□□□ -1.99
SNRNP48-202ENST00000496946 PGA3P0DJD8 388 aa2.64□□□□□ -1.99
SNRNP48-202ENST00000496946 ERGP11308 486 aa2.64□□□□□ -1.99
SNRNP48-202ENST00000496946 PVRP15151 417 aa2.64□□□□□ -1.99
SNRNP48-202ENST00000496946 NTF3P20783 257 aa2.64□□□□□ -1.99
SNRNP48-202ENST00000496946 FOXA1P55317 472 aa2.64□□□□□ -1.99
SNRNP48-202ENST00000496946 XGP55808 180 aa2.64□□□□□ -1.99
SNRNP48-202ENST00000496946 SEC61A1P61619 476 aaKnown RBP2.64□□□□□ -1.99
SNRNP48-202ENST00000496946 RPS28P62857 69 aaKnown RBP2.64□□□□□ -1.99
SNRNP48-202ENST00000496946 CDK3Q00526 305 aa2.64□□□□□ -1.99
SNRNP48-202ENST00000496946 PMVKQ15126 192 aa2.64□□□□□ -1.99
SNRNP48-202ENST00000496946 HIST3H3Q16695 136 aa2.64□□□□□ -1.99
SNRNP48-202ENST00000496946 C4orf26Q17RF5 130 aa2.64□□□□□ -1.99
SNRNP48-202ENST00000496946 COA6Q5JTJ3 125 aaKnown RBP2.64□□□□□ -1.99
SNRNP48-202ENST00000496946 FAM182AQ5T1J6 154 aa2.64□□□□□ -1.99
SNRNP48-202ENST00000496946 BCL2L15Q5TBC7 163 aa2.64□□□□□ -1.99
SNRNP48-202ENST00000496946 GFI1BQ5VTD9 330 aa2.64□□□□□ -1.99
SNRNP48-202ENST00000496946 OTPQ5XKR4 325 aa2.64□□□□□ -1.99
SNRNP48-202ENST00000496946 CD164L2Q6UWJ8 174 aa2.64□□□□□ -1.99
SNRNP48-202ENST00000496946 FAM19A5Q7Z5A7 132 aaPredicted RBP2.64□□□□□ -1.99
SNRNP48-202ENST00000496946 OR2L13Q8N349 312 aa2.64□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms