RNA–Protein interactions for RNA: ENST00000496711.5

GARNL3-220, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 1 (best)

Gene GARNL3, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-220ENST00000496711 RHBDL1O75783 438 aa11.12□□□□□ -0.63
GARNL3-220ENST00000496711 SLC34A2O95436 690 aa11.12□□□□□ -0.63
GARNL3-220ENST00000496711 KCNJ3P48549 501 aa11.12□□□□□ -0.63
GARNL3-220ENST00000496711 RND3P61587 244 aa11.12□□□□□ -0.63
GARNL3-220ENST00000496711 DEFB109BQ30KR1 87 aa11.12□□□□□ -0.63
GARNL3-220ENST00000496711 OR2A2Q6IF42 318 aa11.12□□□□□ -0.63
GARNL3-220ENST00000496711 OR1S2Q8NGQ3 325 aa11.12□□□□□ -0.63
GARNL3-220ENST00000496711 LHFPL5Q8TAF8 219 aa11.12□□□□□ -0.63
GARNL3-220ENST00000496711 SECTM1Q8WVN6 248 aa11.12□□□□□ -0.63
GARNL3-220ENST00000496711 ADAT1Q9BUB4 502 aaKnown RBP11.12□□□□□ -0.63
GARNL3-220ENST00000496711 PLEKHA2Q9HB19 425 aa11.12□□□□□ -0.63
GARNL3-220ENST00000496711 TMED3Q9Y3Q3 217 aa11.12□□□□□ -0.63
GARNL3-220ENST00000496711 ZNF891A8MT65 544 aaPredicted RBP11.11□□□□□ -0.63
GARNL3-220ENST00000496711 E5RGE8 158 aa11.11□□□□□ -0.63
GARNL3-220ENST00000496711 GPR31O00270 319 aa11.11□□□□□ -0.63
GARNL3-220ENST00000496711 TUSC2O75896 110 aa11.11□□□□□ -0.63
GARNL3-220ENST00000496711 MBPP02686 304 aaPredicted RBP11.11□□□□□ -0.63
GARNL3-220ENST00000496711 GLI4P10075 376 aa11.11□□□□□ -0.63
GARNL3-220ENST00000496711 HOXB1P14653 301 aaPredicted RBP11.11□□□□□ -0.63
GARNL3-220ENST00000496711 RAC2P15153 192 aa11.11□□□□□ -0.63
GARNL3-220ENST00000496711 COX5AP20674 150 aa11.11□□□□□ -0.63
GARNL3-220ENST00000496711 GNRHRP30968 328 aa11.11□□□□□ -0.63
GARNL3-220ENST00000496711 HOXC12P31275 282 aa11.11□□□□□ -0.63
GARNL3-220ENST00000496711 ERVS71-1P61550 626 aa11.11□□□□□ -0.63
GARNL3-220ENST00000496711 MEX3BQ6ZN04 569 aaKnown RBP11.11□□□□□ -0.63
GARNL3-220ENST00000496711 WDR86Q86TI4 376 aa11.11□□□□□ -0.63
GARNL3-220ENST00000496711 LDLRAD3Q86YD5 345 aa11.11□□□□□ -0.63
GARNL3-220ENST00000496711 Q8IYB0 196 aa11.11□□□□□ -0.63
GARNL3-220ENST00000496711 SLC35G3Q8N808 338 aa11.11□□□□□ -0.63
GARNL3-220ENST00000496711 C9orf106Q8NAJ2 232 aa11.11□□□□□ -0.63
GARNL3-220ENST00000496711 C1orf162Q8NEQ5 155 aaPredicted RBP11.11□□□□□ -0.63
GARNL3-220ENST00000496711 SLC25A40Q8TBP6 338 aa11.11□□□□□ -0.63
GARNL3-220ENST00000496711 RDH5Q92781 318 aa11.11□□□□□ -0.63
GARNL3-220ENST00000496711 WNT2BQ93097 391 aa11.11□□□□□ -0.63
GARNL3-220ENST00000496711 TMEM222Q9H0R3 208 aa11.11□□□□□ -0.63
GARNL3-220ENST00000496711 DLL3Q9NYJ7 618 aa11.11□□□□□ -0.63
GARNL3-220ENST00000496711 POLDIP2Q9Y2S7 368 aa11.11□□□□□ -0.63
GARNL3-220ENST00000496711 NSG2Q9Y328 171 aa11.11□□□□□ -0.63
GARNL3-220ENST00000496711 EP300Q09472 2414 aaPredicted RBP11.1□□□□□ -0.63
GARNL3-220ENST00000496711 IGKV1-6A0A0C4DH72 117 aa11.1□□□□□ -0.63
GARNL3-220ENST00000496711 IQCF6A8MYZ5 107 aa11.1□□□□□ -0.63
GARNL3-220ENST00000496711 PRR33A8MZF0 331 aa11.1□□□□□ -0.63
GARNL3-220ENST00000496711 HS3ST1O14792 307 aa11.1□□□□□ -0.63
GARNL3-220ENST00000496711 CEACAM4O75871 244 aa11.1□□□□□ -0.63
GARNL3-220ENST00000496711 ZNF44P15621 663 aa11.1□□□□□ -0.63
GARNL3-220ENST00000496711 SELEP16581 610 aa11.1□□□□□ -0.63
GARNL3-220ENST00000496711 KIR2DL2P43627 348 aaPredicted RBP11.1□□□□□ -0.63
GARNL3-220ENST00000496711 HLA-DRB3P79483 266 aa11.1□□□□□ -0.63
GARNL3-220ENST00000496711 SPIN3Q5JUX0 258 aa11.1□□□□□ -0.63
GARNL3-220ENST00000496711 TMEM268Q5VZI3 342 aa11.1□□□□□ -0.63
GARNL3-220ENST00000496711 RPL7L1Q6DKI1 246 aaKnown RBP11.1□□□□□ -0.63
GARNL3-220ENST00000496711 EIF5AL1Q6IS14 154 aaKnown RBP11.1□□□□□ -0.63
GARNL3-220ENST00000496711 VWA1Q6PCB0 445 aa11.1□□□□□ -0.63
GARNL3-220ENST00000496711 ZNF880Q6PDB4 577 aa11.1□□□□□ -0.63
GARNL3-220ENST00000496711 UQCC3Q6UW78 93 aa11.1□□□□□ -0.63
GARNL3-220ENST00000496711 ZNF818PQ6ZRF7 136 aa11.1□□□□□ -0.63
GARNL3-220ENST00000496711 C5orf24Q7Z6I8 188 aa11.1□□□□□ -0.63
GARNL3-220ENST00000496711 TBC1D26Q86UD7 250 aa11.1□□□□□ -0.63
GARNL3-220ENST00000496711 OR1J1Q8NGS3 322 aa11.1□□□□□ -0.63
GARNL3-220ENST00000496711 MARC2Q969Z3 335 aa11.1□□□□□ -0.63
GARNL3-220ENST00000496711 TAF9BQ9HBM6 251 aa11.1□□□□□ -0.63
GARNL3-220ENST00000496711 FBXL17Q9UF56 701 aa11.1□□□□□ -0.63
GARNL3-220ENST00000496711 AMDHD2Q9Y303 409 aa11.1□□□□□ -0.63
GARNL3-220ENST00000496711 URB1O60287 2271 aaKnown RBP11.1□□□□□ -0.63
GARNL3-220ENST00000496711 IGKV1D-13A0A0B4J2D9 117 aa11.1□□□□□ -0.63
GARNL3-220ENST00000496711 RAB19A4D1S5 217 aa11.1□□□□□ -0.63
GARNL3-220ENST00000496711 ARID1AO14497 2285 aa11.1□□□□□ -0.63
GARNL3-220ENST00000496711 DEGS1O15121 323 aa11.1□□□□□ -0.63
GARNL3-220ENST00000496711 WISP2O76076 250 aa11.1□□□□□ -0.63
GARNL3-220ENST00000496711 GAPDHP04406 335 aaKnown RBP11.1□□□□□ -0.63
GARNL3-220ENST00000496711 HOXD4P09016 255 aaPredicted RBP11.1□□□□□ -0.63
GARNL3-220ENST00000496711 IGKV1-13P0DP09 117 aa11.1□□□□□ -0.63
GARNL3-220ENST00000496711 MDH2P40926 338 aaKnown RBP11.1□□□□□ -0.63
GARNL3-220ENST00000496711 UCP2P55851 309 aa11.1□□□□□ -0.63
GARNL3-220ENST00000496711 IGFBP7Q16270 282 aa11.1□□□□□ -0.63
GARNL3-220ENST00000496711 ACSF3Q4G176 576 aaPredicted RBP11.1□□□□□ -0.63
GARNL3-220ENST00000496711 FAM76BQ5HYJ3 339 aa11.1□□□□□ -0.63
GARNL3-220ENST00000496711 Q6P435 159 aa11.1□□□□□ -0.63
GARNL3-220ENST00000496711 GAPTQ8N292 157 aa11.1□□□□□ -0.63
GARNL3-220ENST00000496711 STPG2Q8N412 459 aa11.1□□□□□ -0.63
GARNL3-220ENST00000496711 SCCPDHQ8NBX0 429 aa11.1□□□□□ -0.63
GARNL3-220ENST00000496711 OR4A4PQ8NGN8 299 aa11.1□□□□□ -0.63
GARNL3-220ENST00000496711 C17orf50Q8WW18 174 aa11.1□□□□□ -0.63
GARNL3-220ENST00000496711 ARL11Q969Q4 196 aa11.1□□□□□ -0.63
GARNL3-220ENST00000496711 BOD1Q96IK1 185 aa11.1□□□□□ -0.63
GARNL3-220ENST00000496711 UBE2J1Q9Y385 318 aaPredicted RBP11.1□□□□□ -0.63
GARNL3-220ENST00000496711 CDS2O95674 445 aa11.09□□□□□ -0.63
GARNL3-220ENST00000496711 IGKV3-15P01624 115 aa11.09□□□□□ -0.63
GARNL3-220ENST00000496711 FAM157CP0CG43 387 aa11.09□□□□□ -0.63
GARNL3-220ENST00000496711 CBR1P16152 277 aa11.09□□□□□ -0.63
GARNL3-220ENST00000496711 RCC1P18754 421 aaPredicted RBP11.09□□□□□ -0.63
GARNL3-220ENST00000496711 C20orf204Q6ZNR8 217 aa11.09□□□□□ -0.63
GARNL3-220ENST00000496711 MOB1BQ7L9L4 216 aa11.09□□□□□ -0.63
GARNL3-220ENST00000496711 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.09□□□□□ -0.63
GARNL3-220ENST00000496711 OR52M1Q8NGK5 317 aa11.09□□□□□ -0.63
GARNL3-220ENST00000496711 CABLES2Q9BTV7 478 aa11.09□□□□□ -0.63
GARNL3-220ENST00000496711 COQ3Q9NZJ6 369 aa11.09□□□□□ -0.63
GARNL3-220ENST00000496711 LPAR3Q9UBY5 353 aa11.09□□□□□ -0.63
GARNL3-220ENST00000496711 GLS2Q9UI32 602 aa11.09□□□□□ -0.63
GARNL3-220ENST00000496711 TMEM210A6NLX4 147 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms