RNA–Protein interactions for RNA: ENST00000496116.1

CMSS1-208, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 1 (best)

Gene CMSS1, Length 2,145 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-208ENST00000496116 TMPRSS7Q7RTY8 843 aa9.47□□□□□ -0.89
CMSS1-208ENST00000496116 TBC1D26Q86UD7 250 aa9.47□□□□□ -0.89
CMSS1-208ENST00000496116 SVBPQ8N300 66 aa9.47□□□□□ -0.89
CMSS1-208ENST00000496116 UBAC2Q8NBM4 344 aa9.47□□□□□ -0.89
CMSS1-208ENST00000496116 SECTM1Q8WVN6 248 aa9.47□□□□□ -0.89
CMSS1-208ENST00000496116 TSNAXQ99598 290 aaKnown RBP9.47□□□□□ -0.89
CMSS1-208ENST00000496116 SPIN2AQ99865 258 aa9.47□□□□□ -0.89
CMSS1-208ENST00000496116 SPIN2BQ9BPZ2 258 aa9.47□□□□□ -0.89
CMSS1-208ENST00000496116 NKX6-2Q9C056 277 aaPredicted RBP9.47□□□□□ -0.89
CMSS1-208ENST00000496116 UBE2J1Q9Y385 318 aaPredicted RBP9.47□□□□□ -0.89
CMSS1-208ENST00000496116 BDP1A6H8Y1 2624 aa9.47□□□□□ -0.89
CMSS1-208ENST00000496116 TRBV6-6A0A0A6YYG2 114 aa9.46□□□□□ -0.89
CMSS1-208ENST00000496116 BORCS7-ASMTA0A0B4J1R7 106 aa9.46□□□□□ -0.89
CMSS1-208ENST00000496116 MED6O75586 246 aa9.46□□□□□ -0.89
CMSS1-208ENST00000496116 RCC1P18754 421 aaPredicted RBP9.46□□□□□ -0.89
CMSS1-208ENST00000496116 ATF4P18848 351 aaPredicted RBP9.46□□□□□ -0.89
CMSS1-208ENST00000496116 CA6P23280 308 aa9.46□□□□□ -0.89
CMSS1-208ENST00000496116 S100GP29377 79 aa9.46□□□□□ -0.89
CMSS1-208ENST00000496116 KCNJ3P48549 501 aa9.46□□□□□ -0.89
CMSS1-208ENST00000496116 TSC22D1Q15714 1073 aa9.46□□□□□ -0.89
CMSS1-208ENST00000496116 LDLRAD3Q86YD5 345 aa9.46□□□□□ -0.89
CMSS1-208ENST00000496116 ZNF695Q8IW36 515 aa9.46□□□□□ -0.89
CMSS1-208ENST00000496116 CMTM1Q8IZ96 169 aa9.46□□□□□ -0.89
CMSS1-208ENST00000496116 OR52M1Q8NGK5 317 aa9.46□□□□□ -0.89
CMSS1-208ENST00000496116 RTL8AQ9BWD3 113 aa9.46□□□□□ -0.89
CMSS1-208ENST00000496116 HRH4Q9H3N8 390 aa9.46□□□□□ -0.89
CMSS1-208ENST00000496116 DUXBA0A1W2PPF3 345 aa9.46□□□□□ -0.9
CMSS1-208ENST00000496116 CDRT15L2A8MXV6 281 aa9.46□□□□□ -0.9
CMSS1-208ENST00000496116 J3QT63 122 aa9.46□□□□□ -0.9
CMSS1-208ENST00000496116 HS3ST1O14792 307 aa9.46□□□□□ -0.9
CMSS1-208ENST00000496116 LILRA1O75019 489 aa9.46□□□□□ -0.9
CMSS1-208ENST00000496116 FBXO24O75426 580 aa9.46□□□□□ -0.9
CMSS1-208ENST00000496116 AKR1C2P52895 323 aa9.46□□□□□ -0.9
CMSS1-208ENST00000496116 AKR1C1Q04828 323 aa9.46□□□□□ -0.9
CMSS1-208ENST00000496116 SWI5Q1ZZU3 235 aa9.46□□□□□ -0.9
CMSS1-208ENST00000496116 SMUG1Q53HV7 270 aa9.46□□□□□ -0.9
CMSS1-208ENST00000496116 ATRAIDQ6UW56 229 aa9.46□□□□□ -0.9
CMSS1-208ENST00000496116 PIP4P1Q86T03 277 aa9.46□□□□□ -0.9
CMSS1-208ENST00000496116 Q8IYB0 196 aa9.46□□□□□ -0.9
CMSS1-208ENST00000496116 OR4D5Q8NGN0 318 aa9.46□□□□□ -0.9
CMSS1-208ENST00000496116 TMEM56Q96MV1 263 aa9.46□□□□□ -0.9
CMSS1-208ENST00000496116 SMIM3Q9BZL3 60 aa9.46□□□□□ -0.9
CMSS1-208ENST00000496116 OR51I2Q9H344 312 aa9.46□□□□□ -0.9
CMSS1-208ENST00000496116 IFT22Q9H7X7 185 aa9.46□□□□□ -0.9
CMSS1-208ENST00000496116 CDH20Q9HBT6 801 aa9.46□□□□□ -0.9
CMSS1-208ENST00000496116 POMT1Q9Y6A1 747 aa9.46□□□□□ -0.9
CMSS1-208ENST00000496116 TMEM56-RWDD3S4R434 201 aa9.46□□□□□ -0.9
CMSS1-208ENST00000496116 ARID1AO14497 2285 aa9.45□□□□□ -0.9
CMSS1-208ENST00000496116 PIGBOS1A0A0B4J2F0 54 aa9.45□□□□□ -0.9
CMSS1-208ENST00000496116 F8W036 122 aa9.45□□□□□ -0.9
CMSS1-208ENST00000496116 ABCD4O14678 606 aa9.45□□□□□ -0.9
CMSS1-208ENST00000496116 TUSC2O75896 110 aa9.45□□□□□ -0.9
CMSS1-208ENST00000496116 ZNF14P17017 642 aaPredicted RBP9.45□□□□□ -0.9
CMSS1-208ENST00000496116 PVALBP20472 110 aaPredicted RBP9.45□□□□□ -0.9
CMSS1-208ENST00000496116 F2RL1P55085 397 aa9.45□□□□□ -0.9
CMSS1-208ENST00000496116 HERPUD1Q15011 391 aa9.45□□□□□ -0.9
CMSS1-208ENST00000496116 MST1LQ2TV78 715 aa9.45□□□□□ -0.9
CMSS1-208ENST00000496116 SPATA46Q5T0L3 261 aa9.45□□□□□ -0.9
CMSS1-208ENST00000496116 ZNF818PQ6ZRF7 136 aa9.45□□□□□ -0.9
CMSS1-208ENST00000496116 GAPTQ8N292 157 aa9.45□□□□□ -0.9
CMSS1-208ENST00000496116 OR4A4PQ8NGN8 299 aa9.45□□□□□ -0.9
CMSS1-208ENST00000496116 MRPL30Q8TCC3 161 aaKnown RBP9.45□□□□□ -0.9
CMSS1-208ENST00000496116 ZNF488Q96MN9 340 aa9.45□□□□□ -0.9
CMSS1-208ENST00000496116 DOCK7Q96N67 2140 aa9.45□□□□□ -0.9
CMSS1-208ENST00000496116 TREM1Q9NP99 234 aa9.45□□□□□ -0.9
CMSS1-208ENST00000496116 PARP11Q9NR21 331 aa9.45□□□□□ -0.9
CMSS1-208ENST00000496116 FAM212BQ9NTI7 297 aaPredicted RBP9.45□□□□□ -0.9
CMSS1-208ENST00000496116 POLDIP2Q9Y2S7 368 aa9.45□□□□□ -0.9
CMSS1-208ENST00000496116 LRP5LA4QPB2 252 aa9.44□□□□□ -0.9
CMSS1-208ENST00000496116 DEGS1O15121 323 aa9.44□□□□□ -0.9
CMSS1-208ENST00000496116 SIGLEC5O15389 551 aa9.44□□□□□ -0.9
CMSS1-208ENST00000496116 GALR2O43603 387 aaPredicted RBP9.44□□□□□ -0.9
CMSS1-208ENST00000496116 SMPD2O60906 423 aa9.44□□□□□ -0.9
CMSS1-208ENST00000496116 IGHG3P01860 377 aa9.44□□□□□ -0.9
CMSS1-208ENST00000496116 ZNF44P15621 663 aa9.44□□□□□ -0.9
CMSS1-208ENST00000496116 MDH2P40926 338 aaKnown RBP9.44□□□□□ -0.9
CMSS1-208ENST00000496116 CAV2P51636 162 aa9.44□□□□□ -0.9
CMSS1-208ENST00000496116 CCL11P51671 97 aa9.44□□□□□ -0.9
CMSS1-208ENST00000496116 PMP22Q01453 160 aa9.44□□□□□ -0.9
CMSS1-208ENST00000496116 SPAG16Q8N0X2 631 aa9.44□□□□□ -0.9
CMSS1-208ENST00000496116 OR10J5Q8NHC4 309 aa9.44□□□□□ -0.9
CMSS1-208ENST00000496116 RDH5Q92781 318 aa9.44□□□□□ -0.9
CMSS1-208ENST00000496116 ERGIC1Q969X5 290 aa9.44□□□□□ -0.9
CMSS1-208ENST00000496116 KIRREL1Q96J84 757 aa9.44□□□□□ -0.9
CMSS1-208ENST00000496116 CLCF1Q9UBD9 225 aa9.44□□□□□ -0.9
CMSS1-208ENST00000496116 RCL1Q9Y2P8 373 aaKnown RBP9.44□□□□□ -0.9
CMSS1-208ENST00000496116 MED12LQ86YW9 2145 aa9.44□□□□□ -0.9
CMSS1-208ENST00000496116 TRAV24A0A0B4J272 114 aa9.44□□□□□ -0.9
CMSS1-208ENST00000496116 HSD17B6O14756 317 aa9.44□□□□□ -0.9
CMSS1-208ENST00000496116 NKX2-8O15522 239 aa9.44□□□□□ -0.9
CMSS1-208ENST00000496116 RHBDL1O75783 438 aa9.44□□□□□ -0.9
CMSS1-208ENST00000496116 SEC11BP0C7V7 166 aa9.44□□□□□ -0.9
CMSS1-208ENST00000496116 FTH1P19P0C7X4 201 aa9.44□□□□□ -0.9
CMSS1-208ENST00000496116 IGHV1-2P23083 117 aa9.44□□□□□ -0.9
CMSS1-208ENST00000496116 LPAR6P43657 344 aa9.44□□□□□ -0.9
CMSS1-208ENST00000496116 NKX2-1P43699 371 aaPredicted RBP9.44□□□□□ -0.9
CMSS1-208ENST00000496116 ARHGDIBP52566 201 aa9.44□□□□□ -0.9
CMSS1-208ENST00000496116 PPP1CBP62140 327 aa9.44□□□□□ -0.9
CMSS1-208ENST00000496116 HLA-DRB3P79483 266 aa9.44□□□□□ -0.9
CMSS1-208ENST00000496116 FAM214BQ7L5A3 538 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms