RNA–Protein interactions for RNA: ENST00000494973.1

APTX-231, Transcript of aprataxin, human

TSL 4

Gene APTX, Length 547 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APTX-231	ENST00000494973		A0A0X1KG70	313 aa		11.28	□□□□□ -0.6
APTX-231	ENST00000494973	TMEM82	A0PJX8	343 aa		11.28	□□□□□ -0.6
APTX-231	ENST00000494973	TMEM235	A6NFC5	223 aa		11.28	□□□□□ -0.6
APTX-231	ENST00000494973		F5H0A9	414 aa	Predicted RBP	11.28	□□□□□ -0.6
APTX-231	ENST00000494973	HSPB6	O14558	160 aa		11.28	□□□□□ -0.6
APTX-231	ENST00000494973	GSTZ1	O43708	216 aa	Predicted RBP	11.28	□□□□□ -0.6
APTX-231	ENST00000494973	PSPN	O60542	156 aa		11.28	□□□□□ -0.6
APTX-231	ENST00000494973	HLA-DQB1	P01920	261 aa		11.28	□□□□□ -0.6
APTX-231	ENST00000494973	CEBPD	P49716	269 aa	Predicted RBP	11.28	□□□□□ -0.6
APTX-231	ENST00000494973	P2RX3	P56373	397 aa		11.28	□□□□□ -0.6
APTX-231	ENST00000494973	GNB2	P62879	340 aa		11.28	□□□□□ -0.6
APTX-231	ENST00000494973	MEF2C	Q06413	473 aa	Predicted RBP	11.28	□□□□□ -0.6
APTX-231	ENST00000494973	SRSF7	Q16629	238 aa	Known RBP eCLIP	11.28	□□□□□ -0.6
APTX-231	ENST00000494973	PYDC2	Q56P42	97 aa		11.28	□□□□□ -0.6
APTX-231	ENST00000494973	KRBOX4	Q5JUW0	171 aa		11.28	□□□□□ -0.6
APTX-231	ENST00000494973	C6orf183	Q5T699	404 aa		11.28	□□□□□ -0.6
APTX-231	ENST00000494973	C17orf107	Q6ZR85	190 aa		11.28	□□□□□ -0.6
APTX-231	ENST00000494973	BIVM	Q86UB2	503 aa		11.28	□□□□□ -0.6
APTX-231	ENST00000494973	SNX29P2	Q8IUI4	249 aa		11.28	□□□□□ -0.6
APTX-231	ENST00000494973	IZUMO1	Q8IYV9	350 aa		11.28	□□□□□ -0.6
APTX-231	ENST00000494973	FAM216B	Q8N7L0	139 aa		11.28	□□□□□ -0.6
APTX-231	ENST00000494973	ZNRF1	Q8ND25	227 aa		11.28	□□□□□ -0.6
APTX-231	ENST00000494973	OR4M2	Q8NGB6	313 aa		11.28	□□□□□ -0.6
APTX-231	ENST00000494973	SMIM4	Q8WVI0	70 aa		11.28	□□□□□ -0.6
APTX-231	ENST00000494973	FAAP24	Q9BTP7	215 aa		11.28	□□□□□ -0.6
APTX-231	ENST00000494973	CCDC32	Q9BV29	185 aa		11.28	□□□□□ -0.6
APTX-231	ENST00000494973	IFT46	Q9NQC8	304 aa		11.28	□□□□□ -0.6
APTX-231	ENST00000494973	TAS2R8	Q9NYW2	309 aa		11.28	□□□□□ -0.6
APTX-231	ENST00000494973	ZNF107	Q9UII5	783 aa	Predicted RBP	11.28	□□□□□ -0.6
APTX-231	ENST00000494973	KIR2DS1	A0A191URI9	304 aa		11.27	□□□□□ -0.61
APTX-231	ENST00000494973	hADV38S2	A0JD32	116 aa		11.27	□□□□□ -0.61
APTX-231	ENST00000494973	UBE2QL1	A1L167	161 aa		11.27	□□□□□ -0.61
APTX-231	ENST00000494973	DVL1	O14640	695 aa		11.27	□□□□□ -0.61
APTX-231	ENST00000494973	FOXH1	O75593	365 aa		11.27	□□□□□ -0.61
APTX-231	ENST00000494973	IGHV2-5	P01817	119 aa		11.27	□□□□□ -0.61
APTX-231	ENST00000494973	WNT2	P09544	360 aa		11.27	□□□□□ -0.61
APTX-231	ENST00000494973	NDUFB7	P17568	137 aa		11.27	□□□□□ -0.61
APTX-231	ENST00000494973	AMY2B	P19961	511 aa		11.27	□□□□□ -0.61
APTX-231	ENST00000494973	USF1	P22415	310 aa	Predicted RBP	11.27	□□□□□ -0.61
APTX-231	ENST00000494973	RCVRN	P35243	200 aa		11.27	□□□□□ -0.61
APTX-231	ENST00000494973	KIR2DS4	P43632	304 aa		11.27	□□□□□ -0.61
APTX-231	ENST00000494973	AP3S2	P59780	193 aa		11.27	□□□□□ -0.61
APTX-231	ENST00000494973	KIR2DS1	Q14954	304 aa		11.27	□□□□□ -0.61
APTX-231	ENST00000494973	ATXN7L3	Q14CW9	347 aa	Predicted RBP	11.27	□□□□□ -0.61
APTX-231	ENST00000494973	PDCD1	Q15116	288 aa		11.27	□□□□□ -0.61
APTX-231	ENST00000494973	TMEM30B	Q3MIR4	351 aa		11.27	□□□□□ -0.61
APTX-231	ENST00000494973	RSBN1	Q5VWQ0	802 aa	Predicted RBP	11.27	□□□□□ -0.61
APTX-231	ENST00000494973	ZNF497	Q6ZNH5	498 aa		11.27	□□□□□ -0.61
APTX-231	ENST00000494973	GAPT	Q8N292	157 aa		11.27	□□□□□ -0.61
APTX-231	ENST00000494973	ZNF565	Q8N9K5	539 aa		11.27	□□□□□ -0.61
APTX-231	ENST00000494973	OR4S1	Q8NGB4	309 aa		11.27	□□□□□ -0.61
APTX-231	ENST00000494973	DEDD2	Q8WXF8	326 aa		11.27	□□□□□ -0.61
APTX-231	ENST00000494973	SSBP3	Q9BWW4	388 aa	Predicted RBP	11.27	□□□□□ -0.61
APTX-231	ENST00000494973	SHARPIN	Q9H0F6	387 aa		11.27	□□□□□ -0.61
APTX-231	ENST00000494973	ZMAT3	Q9HA38	289 aa	Known RBP	11.27	□□□□□ -0.61
APTX-231	ENST00000494973	KCNIP1	Q9NZI2	227 aa		11.27	□□□□□ -0.61
APTX-231	ENST00000494973	AK3	Q9UIJ7	227 aa		11.27	□□□□□ -0.61
APTX-231	ENST00000494973	CELSR2	Q9HCU4	2923 aa		11.27	□□□□□ -0.61
APTX-231	ENST00000494973	APC	P25054	2843 aa		11.27	□□□□□ -0.61
APTX-231	ENST00000494973	IGHV4-30-2	A0A087WSY4	118 aa		11.26	□□□□□ -0.61
APTX-231	ENST00000494973	TRGV10	A0A0A0MS01	117 aa		11.26	□□□□□ -0.61
APTX-231	ENST00000494973		A8MXK9	166 aa		11.26	□□□□□ -0.61
APTX-231	ENST00000494973	RBBP9	O75884	186 aa		11.26	□□□□□ -0.61
APTX-231	ENST00000494973	NAPSA	O96009	420 aa		11.26	□□□□□ -0.61
APTX-231	ENST00000494973	GSTT2B	P0CG30	244 aa		11.26	□□□□□ -0.61
APTX-231	ENST00000494973	TBP	P20226	339 aa		11.26	□□□□□ -0.61
APTX-231	ENST00000494973	INPP1	P49441	399 aa		11.26	□□□□□ -0.61
APTX-231	ENST00000494973	PPP5C	P53041	499 aa		11.26	□□□□□ -0.61
APTX-231	ENST00000494973	EDDM3B	P56851	147 aa		11.26	□□□□□ -0.61
APTX-231	ENST00000494973	HOXA4	Q00056	320 aa	Predicted RBP	11.26	□□□□□ -0.61
APTX-231	ENST00000494973	EDDM3A	Q14507	147 aa		11.26	□□□□□ -0.61
APTX-231	ENST00000494973	TRIQK	Q629K1	86 aa		11.26	□□□□□ -0.61
APTX-231	ENST00000494973	WDR25	Q64LD2	544 aa	Predicted RBP	11.26	□□□□□ -0.61
APTX-231	ENST00000494973	LYPD2	Q6UXB3	125 aa		11.26	□□□□□ -0.61
APTX-231	ENST00000494973		Q6ZS49	121 aa		11.26	□□□□□ -0.61
APTX-231	ENST00000494973	TRAPPC6B	Q86SZ2	158 aa		11.26	□□□□□ -0.61
APTX-231	ENST00000494973		Q8N402	240 aa		11.26	□□□□□ -0.61
APTX-231	ENST00000494973	MFSD4A	Q8N468	514 aa		11.26	□□□□□ -0.61
APTX-231	ENST00000494973	BPIFB2	Q8N4F0	458 aa		11.26	□□□□□ -0.61
APTX-231	ENST00000494973	CLDND2	Q8NHS1	167 aa		11.26	□□□□□ -0.61
APTX-231	ENST00000494973	GPX8	Q8TED1	209 aa		11.26	□□□□□ -0.61
APTX-231	ENST00000494973	ABHD1	Q96SE0	405 aa		11.26	□□□□□ -0.61
APTX-231	ENST00000494973	OCSTAMP	Q9BR26	566 aa		11.26	□□□□□ -0.61
APTX-231	ENST00000494973	SRR	Q9GZT4	340 aa		11.26	□□□□□ -0.61
APTX-231	ENST00000494973	ZNF286A	Q9HBT8	521 aa		11.26	□□□□□ -0.61
APTX-231	ENST00000494973	CTSZ	Q9UBR2	303 aa		11.26	□□□□□ -0.61
APTX-231	ENST00000494973	OPN4	Q9UHM6	478 aa		11.26	□□□□□ -0.61
APTX-231	ENST00000494973	METRN	Q9UJH8	293 aa		11.26	□□□□□ -0.61
APTX-231	ENST00000494973	TRAPPC2L	Q9UL33	140 aa		11.26	□□□□□ -0.61
APTX-231	ENST00000494973	KCNK7	Q9Y2U2	307 aa		11.26	□□□□□ -0.61
APTX-231	ENST00000494973	FBN2	P35556	2912 aa		11.26	□□□□□ -0.61
APTX-231	ENST00000494973	MEIKIN	A0A087WXM9	373 aa		11.25	□□□□□ -0.61
APTX-231	ENST00000494973	ODAM	A1E959	279 aa		11.25	□□□□□ -0.61
APTX-231	ENST00000494973	DIRAS3	O95661	229 aa		11.25	□□□□□ -0.61
APTX-231	ENST00000494973	CSF1	P09603	554 aa		11.25	□□□□□ -0.61
APTX-231	ENST00000494973	GZMH	P20718	246 aa		11.25	□□□□□ -0.61
APTX-231	ENST00000494973	LOXL1	Q08397	574 aa	Predicted RBP	11.25	□□□□□ -0.61
APTX-231	ENST00000494973	ZNF79	Q15937	498 aa		11.25	□□□□□ -0.61
APTX-231	ENST00000494973	ACTBL2	Q562R1	376 aa		11.25	□□□□□ -0.61
APTX-231	ENST00000494973	NUDCD2	Q8WVJ2	157 aa		11.25	□□□□□ -0.61

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